RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 CHST5Q9GZS9 411 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 THAP10Q9P2Z0 257 aaPredicted RBP7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 ZNF83P51522 516 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 NKG7Q16617 165 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 VSTM2LQ96N03 204 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 ATP6V0BQ99437 205 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 PCDH15Q96QU1 1955 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 OR9G9P0C7N8 305 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 KLRD1Q13241 179 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 B9D1Q9UPM9 204 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 C9JCJ5 164 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 MARVELD3Q96A59 401 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 C8orf88P0DMB2 117 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 P2RY6Q15077 328 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 PRADC1Q9BSG0 188 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 TPTE2P1Q5T6R2 138 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 LAMB2P55268 1798 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 CFHR2P36980 270 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 CXorf67Q86X51 503 aaPredicted RBP7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 KLHDC2Q9Y2U9 406 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 U3KQE9 123 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 DENND4AQ7Z401 1863 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 TMEM99Q8N816 258 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 PEMTQ9UBM1 199 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 EPPINO95925 133 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 SFTA2Q6UW10 78 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 SPEM1Q8N4L4 309 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 PLPPR1Q8TBJ4 325 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 KIR3DX1Q9H7L2 352 aa7.44□□□□□ -1.22
CACNA1C-220ENST00000399655 MST1RQ04912 1400 aa7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 TFPI2P48307 235 aa7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 TNFRSF9Q07011 255 aa7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 ZNF275Q9NSD4 429 aaPredicted RBP7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 EXPH5Q8NEV8 1989 aa7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 PAQR9Q6ZVX9 377 aa7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 PPDPFLQ8WWR9 84 aa7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 AURKAIP1Q9NWT8 199 aaPredicted RBP7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 CLTCQ00610 1675 aaKnown RBP7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 PCNX3Q9H6A9 2034 aa7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 RIF1Q5UIP0 2472 aaKnown RBP7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 DSCAMO60469 2012 aa7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 IGHV3-64DA0A0J9YX35 117 aa7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 RASL10AQ92737 203 aa7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 UBR1Q8IWV7 1749 aa7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 TARBP1Q13395 1621 aaKnown RBP7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 A0A087WX48 190 aa7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 MYMXA0A1B0GTQ4 84 aa7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 NKAPP1Q8N9T2 125 aa7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 TRGV11A0A075B6L2 103 aa7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 TMEM202A6NGA9 273 aa7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 TMEM171Q8WVE6 324 aa7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 NDUFA2O43678 99 aa7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 CGB2Q6NT52 195 aa7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 PTPRDP23468 1912 aa7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 MAGI3Q5TCQ9 1506 aa7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 LINC01553A4QN01 128 aa7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 LDLRAD4O15165 306 aa7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 SRP19P09132 144 aaKnown RBP7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 CENPWQ5EE01 88 aa7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 NRN1Q9NPD7 142 aa7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 WDR82Q6UXN9 313 aa7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 AMN1Q8IY45 258 aa7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 RFESDQ8TAC1 157 aa7.43□□□□□ -1.22
CACNA1C-220ENST00000399655 THY1P04216 161 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 Q6ZSR9 355 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 ABHD12Q8N2K0 398 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 IKZF4Q9H2S9 585 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 DOCK5Q9H7D0 1870 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 GLRXP35754 106 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 OR5P3Q8WZ94 311 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 LINC01587Q99440 93 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 TAF1P21675 1872 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 FAM90A7PA6NKC0 464 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 FAM90A22PA8MWA6 464 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 FAM90A12PA8MX19 464 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 FAM90A23PA8MXZ1 464 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 LHBP01229 141 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 FAM53BQ14153 422 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 Q6ZPB1 254 aaPredicted RBP7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 PIANPQ8IYJ0 282 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 IMMP2LQ96T52 175 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 IL17CQ9P0M4 197 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 TCRBV16S1A1N1A0A5B0 115 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 IGHG2P01859 326 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 CD5P06127 495 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 RPL31P62899 125 aaKnown RBP7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 LAGE3Q14657 143 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 GAGE12BA1L429 117 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 FUSP35637 526 aaKnown RBP eCLIP7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 ADAD2Q8NCV1 583 aaKnown RBP7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 IGFBPL1Q8WX77 278 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 SDF2Q99470 211 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 MED19A0JLT2 244 aaPredicted RBP7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 NPIPB3Q92617 1050 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 CRYBB3P26998 211 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 C1orf167Q5SNV9 1468 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 B4GALT3O60512 393 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 GSN-AS1Q9NRJ2 163 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 TRPM7Q96QT4 1865 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 MYOM1P52179 1685 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms