RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 YPEL3P61236 119 aaPredicted RBP4.23□□□□□ -1.73
SSR1-202ENST00000397511 SERF2P84101 59 aa4.23□□□□□ -1.73
SSR1-202ENST00000397511 FOXL1Q12952 345 aa4.23□□□□□ -1.73
SSR1-202ENST00000397511 OR8B8Q15620 311 aa4.23□□□□□ -1.73
SSR1-202ENST00000397511 ZNF726P1Q15940 193 aa4.23□□□□□ -1.73
SSR1-202ENST00000397511 LTC4SQ16873 150 aa4.23□□□□□ -1.73
SSR1-202ENST00000397511 LRRC10Q5BKY1 277 aa4.23□□□□□ -1.73
SSR1-202ENST00000397511 TMEM42Q69YG0 159 aa4.23□□□□□ -1.73
SSR1-202ENST00000397511 TMEM144Q7Z5S9 345 aa4.23□□□□□ -1.73
SSR1-202ENST00000397511 MKXQ8IYA7 352 aa4.23□□□□□ -1.73
SSR1-202ENST00000397511 SAXO1Q8IYX7 474 aa4.23□□□□□ -1.73
SSR1-202ENST00000397511 SELENOHQ8IZQ5 122 aaKnown RBP4.23□□□□□ -1.73
SSR1-202ENST00000397511 OR4F5Q8NH21 305 aa4.23□□□□□ -1.73
SSR1-202ENST00000397511 C10orf35Q96D05 121 aa4.23□□□□□ -1.73
SSR1-202ENST00000397511 OR4F4Q96R69 305 aa4.23□□□□□ -1.73
SSR1-202ENST00000397511 CITED2Q99967 270 aaPredicted RBP4.23□□□□□ -1.73
SSR1-202ENST00000397511 PSMG3Q9BT73 122 aaPredicted RBP4.23□□□□□ -1.73
SSR1-202ENST00000397511 SLC39A9Q9NUM3 307 aa4.23□□□□□ -1.73
SSR1-202ENST00000397511 BSNQ9UPA5 3926 aa4.23□□□□□ -1.73
SSR1-202ENST00000397511 ZFHX2Q9C0A1 2572 aaPredicted RBP4.23□□□□□ -1.73
SSR1-202ENST00000397511 AKAP13Q12802 2813 aa4.23□□□□□ -1.73
SSR1-202ENST00000397511 CD300LBA8K4G0 201 aa4.23□□□□□ -1.73
SSR1-202ENST00000397511 ZNF891A8MT65 544 aaPredicted RBP4.23□□□□□ -1.73
SSR1-202ENST00000397511 CDIPTO14735 213 aa4.23□□□□□ -1.73
SSR1-202ENST00000397511 LYZL6O75951 148 aa4.23□□□□□ -1.73
SSR1-202ENST00000397511 DEFA4P12838 97 aa4.23□□□□□ -1.73
SSR1-202ENST00000397511 LHX2P50458 406 aa4.23□□□□□ -1.73
SSR1-202ENST00000397511 TESK1Q15569 626 aa4.23□□□□□ -1.73
SSR1-202ENST00000397511 Q6ZRM9 215 aa4.23□□□□□ -1.73
SSR1-202ENST00000397511 S100A7AQ86SG5 101 aa4.23□□□□□ -1.73
SSR1-202ENST00000397511 TMEM251Q8N6I4 163 aa4.23□□□□□ -1.73
SSR1-202ENST00000397511 VSIRQ9H7M9 311 aa4.23□□□□□ -1.73
SSR1-202ENST00000397511 TP53TG3Q9ULZ0 132 aa4.23□□□□□ -1.73
SSR1-202ENST00000397511 BOKQ9UMX3 212 aaPredicted RBP4.23□□□□□ -1.73
SSR1-202ENST00000397511 ASH1LQ9NR48 2969 aaKnown RBP4.22□□□□□ -1.73
SSR1-202ENST00000397511 TPRP12270 2363 aaKnown RBP4.22□□□□□ -1.73
SSR1-202ENST00000397511 SERPINE2P07093 398 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 PLP2Q04941 152 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 Q0VG73 95 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 SAMD13Q5VXD3 122 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 TMEM211Q6ICI0 200 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 PRSS57Q6UWY2 283 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 ZNF826PQ6ZT77 177 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 TCF23Q7RTU1 214 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 ZNF808Q8N4W9 903 aaPredicted RBP4.22□□□□□ -1.73
SSR1-202ENST00000397511 Q8N976 141 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 ZBTB34Q8NCN2 500 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 C1orf162Q8NEQ5 155 aaPredicted RBP4.22□□□□□ -1.73
SSR1-202ENST00000397511 C1QTNF5Q9BXJ0 243 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 ELOVL5Q9NYP7 299 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 TBL2Q9Y4P3 447 aaKnown RBP4.22□□□□□ -1.73
SSR1-202ENST00000397511 LRBAP50851 2863 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 PTPRZ1P23471 2315 aaPredicted RBP4.22□□□□□ -1.73
SSR1-202ENST00000397511 GAGE12BA1L429 117 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 DPRXA6NFQ7 191 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 DEFB108AA8MXU0 73 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 J3QW42 95 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 OR7C2O60412 319 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 RBMXL2O75526 392 aaKnown RBP4.22□□□□□ -1.73
SSR1-202ENST00000397511 PGLYRP1O75594 196 aaPredicted RBP4.22□□□□□ -1.73
SSR1-202ENST00000397511 TNFSF15O95150 251 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 MT-CO3P00414 261 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 GPX1P07203 203 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 LINC00310P59036 64 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 PMCHL1Q16048 86 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 CEACAM21Q3KPI0 293 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 SPANXN5Q5MJ07 72 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 PET117Q6UWS5 81 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 TMEM108Q6UXF1 575 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 ODF3L1Q8IXM7 274 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 DEFB123Q8N688 67 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 OR4S2Q8NH73 311 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 SGMS2Q8NHU3 365 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 PLPPR1Q8TBJ4 325 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 NEIL1Q96FI4 390 aaPredicted RBP4.22□□□□□ -1.73
SSR1-202ENST00000397511 MRPL18Q9H0U6 180 aaKnown RBP4.22□□□□□ -1.73
SSR1-202ENST00000397511 NRN1Q9NPD7 142 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 CACNG5Q9UF02 275 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 TRAPPC2LQ9UL33 140 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 ATP23Q9Y6H3 246 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 ARFGEF3Q5TH69 2177 aa4.22□□□□□ -1.73
SSR1-202ENST00000397511 IGHV3-43A0A0B4J1X8 118 aa4.21□□□□□ -1.73
SSR1-202ENST00000397511 TRAV24A0A0B4J272 114 aa4.21□□□□□ -1.73
SSR1-202ENST00000397511 A0A1B0GV72 72 aa4.21□□□□□ -1.73
SSR1-202ENST00000397511 MDFIC2A0A1B0GVS7 189 aa4.21□□□□□ -1.73
SSR1-202ENST00000397511 ANKRD30BLA7E2S9 258 aa4.21□□□□□ -1.73
SSR1-202ENST00000397511 KIAA1324LA8MWY0 1029 aaPredicted RBP4.21□□□□□ -1.73
SSR1-202ENST00000397511 SH2D1BO14796 132 aa4.21□□□□□ -1.73
SSR1-202ENST00000397511 DEGS1O15121 323 aa4.21□□□□□ -1.73
SSR1-202ENST00000397511 AGFG2O95081 481 aa4.21□□□□□ -1.73
SSR1-202ENST00000397511 IGHV3-43DP0DP04 118 aa4.21□□□□□ -1.73
SSR1-202ENST00000397511 AMTP48728 403 aa4.21□□□□□ -1.73
SSR1-202ENST00000397511 MEOX1P50221 254 aa4.21□□□□□ -1.73
SSR1-202ENST00000397511 FGF12P61328 243 aa4.21□□□□□ -1.73
SSR1-202ENST00000397511 PAX2Q02962 417 aa4.21□□□□□ -1.73
SSR1-202ENST00000397511 RBPJQ06330 500 aa4.21□□□□□ -1.73
SSR1-202ENST00000397511 SRSF6Q13247 344 aaKnown RBP4.21□□□□□ -1.73
SSR1-202ENST00000397511 STUMQ69YW2 141 aa4.21□□□□□ -1.73
SSR1-202ENST00000397511 FAM71F2Q6NXP2 309 aa4.21□□□□□ -1.73
SSR1-202ENST00000397511 WDR5BQ86VZ2 330 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms