RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 GOLGA8RI6L899 631 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 K7ERQ8 282 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 M0R381 172 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 GPR171O14626 319 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 ERLIN1O75477 346 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 KLF7O75840 302 aaPredicted RBP-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 PTMAP06454 111 aaKnown RBP-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 OR8G3PP0DMU2 310 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 EIF2B2P49770 351 aaKnown RBP-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 FXYD2P54710 66 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 SUPT4H1P63272 117 aaKnown RBP-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 DMTNQ08495 405 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 PDE6HQ13956 83 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 IL18Q14116 193 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 RAB11BQ15907 218 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 ACTL10Q5JWF8 245 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 FAHD1Q6P587 224 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 TTC33Q6PID6 262 aaPredicted RBP-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 LINC00322Q6ZN03 302 aaPredicted RBP-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 RASSF6Q6ZTQ3 369 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 PHF13Q86YI8 300 aaPredicted RBP-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 KATNAL2Q8IYT4 538 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 ARHGAP18Q8N392 663 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 C3orf56Q8N813 242 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 OR6K2Q8NGY2 324 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 OR6N2Q8NGY6 317 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 TOP1MTQ969P6 601 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 LRRC45Q96CN5 670 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 OPTNQ96CV9 577 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 CPNE2Q96FN4 548 aaPredicted RBP-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 HINT2Q9BX68 163 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 COMMD5Q9GZQ3 224 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 OR51B6Q9H340 312 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 ZNHIT6Q9NWK9 470 aaKnown RBP-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 TAS2R4Q9NYW5 299 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 TMEM14CQ9P0S9 112 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 IFNKQ9P0W0 207 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 EXTL2Q9UBQ6 330 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 TNXBP22105 4242 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 ATAD2BQ9ULI0 1458 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 APC2O95996 2303 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 LRP2P98164 4655 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 THSD7AQ9UPZ6 1657 aa-0.43□□□□□ -2.48
SNORD28-201ENST00000384706 MYO18AQ92614 2054 aaKnown RBP-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 NEURL4Q96JN8 1562 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 GOLGA8IPA6NC78 632 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 SUPT3HB4E1H0 165 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 C9JCJ5 164 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 GOLGA6L19H0YKK7 550 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 KCNK1O00180 336 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 WRBO00258 174 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 LEPROTO15243 131 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 NSA2O95478 260 aaKnown RBP-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 CLPSP04118 112 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 HLA-DQB2P05538 268 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 SULT1A3P0DMM9 295 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 SULT1A4P0DMN0 295 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 SFTPCP11686 197 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 HIST1H1CP16403 213 aaKnown RBP-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 SPI1P17947 270 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 NFYAP23511 347 aaPredicted RBP-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 F8A1P23610 371 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 HLA-DMBP28068 263 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 ADORA1P30542 326 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 RANBP1P43487 201 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 TMEM33P57088 247 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 RAB31Q13636 194 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 C1DQ13901 141 aaKnown RBP-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 BSXQ3C1V8 233 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 MESTQ5EB52 335 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 FAM74A1Q5RGS3 127 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 LCN15Q6UWW0 184 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 ZNF826PQ6ZT77 177 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 PID1Q7Z2X4 250 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 ZNF550Q7Z398 422 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 LYG2Q86SG7 212 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 OR4D11Q8NGI4 311 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 OR52K2Q8NGK3 314 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 OR10AC1Q8NH08 325 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 FAM213BQ8TBF2 198 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 FAM45AQ8TCE6 357 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 GPX8Q8TED1 209 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 Q8WTZ3 238 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 RAB2BQ8WUD1 216 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 MRAP2Q96G30 205 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 ERMAPQ96PL5 475 aaPredicted RBP-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 GNB1LQ9BYB4 327 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 SPACA1Q9HBV2 294 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 TMBIM4Q9HC24 238 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 MED29Q9NX70 200 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 EMC3Q9P0I2 261 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 FANCMQ8IYD8 2048 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 UNC13CQ8NB66 2214 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 PHLPP2Q6ZVD8 1323 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 ZGRF1Q86YA3 2104 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 PTPRQQ9UMZ3 2332 aa-0.44□□□□□ -2.48
SNORD28-201ENST00000384706 HSPG2P98160 4391 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 NPATQ14207 1427 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 TRAV8-1A0A0A6YYK1 113 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 TRBV30A0A0K0K1B3 111 aa-0.45□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms