RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 IFNA10P01566 189 aa9.03□□□□□ -0.96
BEST1-201ENST00000378043 FTH1P19P0C7X4 201 aa9.03□□□□□ -0.96
BEST1-201ENST00000378043 ZNF83P51522 516 aa9.03□□□□□ -0.96
BEST1-201ENST00000378043 TMPRSS3P57727 454 aa9.03□□□□□ -0.96
BEST1-201ENST00000378043 TMEM249Q2WGJ8 235 aa9.03□□□□□ -0.96
BEST1-201ENST00000378043 FAM201AQ5SY85 155 aa9.03□□□□□ -0.96
BEST1-201ENST00000378043 ALKBH2Q6NS38 261 aa9.03□□□□□ -0.96
BEST1-201ENST00000378043 OR52E5Q8NH55 327 aa9.03□□□□□ -0.96
BEST1-201ENST00000378043 OR4A16Q8NH70 328 aa9.03□□□□□ -0.96
BEST1-201ENST00000378043 RAB1CQ92928 201 aa9.03□□□□□ -0.96
BEST1-201ENST00000378043 MGST2Q99735 147 aa9.03□□□□□ -0.96
BEST1-201ENST00000378043 MS4A5Q9H3V2 200 aa9.03□□□□□ -0.96
BEST1-201ENST00000378043 YLPM1P49750 1951 aaKnown RBP9.02□□□□□ -0.97
BEST1-201ENST00000378043 A0A1W2PPQ1 181 aa9.02□□□□□ -0.97
BEST1-201ENST00000378043 SMCO3A2RU48 225 aa9.02□□□□□ -0.97
BEST1-201ENST00000378043 VENTXO95231 258 aa9.02□□□□□ -0.97
BEST1-201ENST00000378043 UBE2G2P60604 165 aa9.02□□□□□ -0.97
BEST1-201ENST00000378043 MOGAT3Q86VF5 341 aa9.02□□□□□ -0.97
BEST1-201ENST00000378043 LURAP1LQ8IV03 231 aa9.02□□□□□ -0.97
BEST1-201ENST00000378043 C1orf174Q8IYL3 243 aa9.02□□□□□ -0.97
BEST1-201ENST00000378043 PACRGQ96M98 296 aaPredicted RBP9.02□□□□□ -0.97
BEST1-201ENST00000378043 HEYLQ9NQ87 328 aaPredicted RBP9.02□□□□□ -0.97
BEST1-201ENST00000378043 TMEM140Q9NV12 185 aa9.02□□□□□ -0.97
BEST1-201ENST00000378043 AURKAIP1Q9NWT8 199 aaPredicted RBP9.02□□□□□ -0.97
BEST1-201ENST00000378043 GFOD1Q9NXC2 390 aa9.02□□□□□ -0.97
BEST1-201ENST00000378043 RAI1Q7Z5J4 1906 aaPredicted RBP9.02□□□□□ -0.97
BEST1-201ENST00000378043 MBD3L4A6NDZ8 208 aaPredicted RBP9.02□□□□□ -0.97
BEST1-201ENST00000378043 MBD3L3A6NE82 208 aaPredicted RBP9.02□□□□□ -0.97
BEST1-201ENST00000378043 MBD3L5A6NJ08 208 aaPredicted RBP9.02□□□□□ -0.97
BEST1-201ENST00000378043 GGCTO75223 188 aaKnown RBP9.02□□□□□ -0.97
BEST1-201ENST00000378043 MZT1Q08AG7 82 aa9.02□□□□□ -0.97
BEST1-201ENST00000378043 GAMTQ14353 236 aa9.02□□□□□ -0.97
BEST1-201ENST00000378043 PRSS8Q16651 343 aa9.02□□□□□ -0.97
BEST1-201ENST00000378043 C17orf58Q2M2W7 97 aa9.02□□□□□ -0.97
BEST1-201ENST00000378043 DUX4L9Q6RFH8 374 aaPredicted RBP9.02□□□□□ -0.97
BEST1-201ENST00000378043 ZNF474Q6S9Z5 364 aaPredicted RBP9.02□□□□□ -0.97
BEST1-201ENST00000378043 LINC01551Q86U37 167 aa9.02□□□□□ -0.97
BEST1-201ENST00000378043 TMEM183AQ8IXX5 376 aa9.02□□□□□ -0.97
BEST1-201ENST00000378043 RPRMLQ8N4K4 120 aa9.02□□□□□ -0.97
BEST1-201ENST00000378043 LINC00469Q8N7U9 141 aa9.02□□□□□ -0.97
BEST1-201ENST00000378043 MBD3L2Q8NHZ7 208 aaPredicted RBP9.02□□□□□ -0.97
BEST1-201ENST00000378043 ANAPC16Q96DE5 110 aa9.02□□□□□ -0.97
BEST1-201ENST00000378043 GGTLC1Q9BX51 225 aa9.02□□□□□ -0.97
BEST1-201ENST00000378043 PPP5D1E7EU14 171 aa9.01□□□□□ -0.97
BEST1-201ENST00000378043 NDUFB4O95168 129 aa9.01□□□□□ -0.97
BEST1-201ENST00000378043 OPRK1P41145 380 aa9.01□□□□□ -0.97
BEST1-201ENST00000378043 DEFB109BQ30KR1 87 aa9.01□□□□□ -0.97
BEST1-201ENST00000378043 CT45A1Q5HYN5 189 aa9.01□□□□□ -0.97
BEST1-201ENST00000378043 MIC13Q5XKP0 118 aa9.01□□□□□ -0.97
BEST1-201ENST00000378043 ZNF114Q8NC26 417 aa9.01□□□□□ -0.97
BEST1-201ENST00000378043 CT45A3Q8NHU0 189 aa9.01□□□□□ -0.97
BEST1-201ENST00000378043 S100PBPQ96BU1 408 aa9.01□□□□□ -0.97
BEST1-201ENST00000378043 OR5B12Q96R08 314 aa9.01□□□□□ -0.97
BEST1-201ENST00000378043 S1PR3Q99500 378 aa9.01□□□□□ -0.97
BEST1-201ENST00000378043 PARD6AQ9NPB6 346 aa9.01□□□□□ -0.97
BEST1-201ENST00000378043 CALYQ9NYX4 217 aa9.01□□□□□ -0.97
BEST1-201ENST00000378043 TRBV20OR9-2A0A075B6H5 130 aa9.01□□□□□ -0.97
BEST1-201ENST00000378043 PGPEP1LA6NFU8 196 aa9.01□□□□□ -0.97
BEST1-201ENST00000378043 MPDU1O75352 247 aa9.01□□□□□ -0.97
BEST1-201ENST00000378043 COA6Q5JTJ3 125 aaKnown RBP9.01□□□□□ -0.97
BEST1-201ENST00000378043 OR5T1Q8NG75 326 aa9.01□□□□□ -0.97
BEST1-201ENST00000378043 TCF19Q9Y242 345 aa9.01□□□□□ -0.97
BEST1-201ENST00000378043 LSM4Q9Y4Z0 139 aaKnown RBP9.01□□□□□ -0.97
BEST1-201ENST00000378043 A0A1W2PPV4 95 aa9□□□□□ -0.97
BEST1-201ENST00000378043 M0R1B8 84 aa9□□□□□ -0.97
BEST1-201ENST00000378043 TMPRSS2O15393 492 aa9□□□□□ -0.97
BEST1-201ENST00000378043 SPRY3O43610 288 aa9□□□□□ -0.97
BEST1-201ENST00000378043 AMBPP02760 352 aa9□□□□□ -0.97
BEST1-201ENST00000378043 ARL14EPLP0DKL9 152 aa9□□□□□ -0.97
BEST1-201ENST00000378043 CHRNA7P36544 502 aa9□□□□□ -0.97
BEST1-201ENST00000378043 CST9LP1Q5W188 147 aa9□□□□□ -0.97
BEST1-201ENST00000378043 OR2T10Q8NGZ9 312 aa9□□□□□ -0.97
BEST1-201ENST00000378043 OR1P1Q8NH06 330 aa9□□□□□ -0.97
BEST1-201ENST00000378043 PPP1R35Q8TAP8 253 aa9□□□□□ -0.97
BEST1-201ENST00000378043 FAM216AQ8WUB2 273 aa9□□□□□ -0.97
BEST1-201ENST00000378043 ITLN1Q8WWA0 313 aa9□□□□□ -0.97
BEST1-201ENST00000378043 PFDN5Q99471 154 aa9□□□□□ -0.97
BEST1-201ENST00000378043 SAA2-SAA4A0A096LPE2 208 aa9□□□□□ -0.97
BEST1-201ENST00000378043 PDE6DO43924 150 aa9□□□□□ -0.97
BEST1-201ENST00000378043 CEACAM4O75871 244 aa9□□□□□ -0.97
BEST1-201ENST00000378043 LY86O95711 162 aa9□□□□□ -0.97
BEST1-201ENST00000378043 STAG3L2P0CL84 134 aa9□□□□□ -0.97
BEST1-201ENST00000378043 STAG3L3P0CL85 134 aa9□□□□□ -0.97
BEST1-201ENST00000378043 SAA2P0DJI9 122 aaPredicted RBP9□□□□□ -0.97
BEST1-201ENST00000378043 FAM3BP58499 235 aaPredicted RBP9□□□□□ -0.97
BEST1-201ENST00000378043 ERVK-16P61578 105 aa9□□□□□ -0.97
BEST1-201ENST00000378043 ARSJQ5FYB0 599 aaPredicted RBP9□□□□□ -0.97
BEST1-201ENST00000378043 VHLLQ6RSH7 139 aa9□□□□□ -0.97
BEST1-201ENST00000378043 C22orf34Q6ZV56 151 aa9□□□□□ -0.97
BEST1-201ENST00000378043 FAM215AQ9Y5M1 114 aa9□□□□□ -0.97
BEST1-201ENST00000378043 PXMP4Q9Y6I8 212 aa9□□□□□ -0.97
BEST1-201ENST00000378043 TYMSP04818 313 aa8.99□□□□□ -0.97
BEST1-201ENST00000378043 GLRXP35754 106 aa8.99□□□□□ -0.97
BEST1-201ENST00000378043 NUBP1P53384 320 aa8.99□□□□□ -0.97
BEST1-201ENST00000378043 KLF3P57682 345 aaPredicted RBP8.99□□□□□ -0.97
BEST1-201ENST00000378043 RPP30P78346 268 aaKnown RBP8.99□□□□□ -0.97
BEST1-201ENST00000378043 ACTL10Q5JWF8 245 aa8.99□□□□□ -0.97
BEST1-201ENST00000378043 DNLZQ5SXM8 178 aa8.99□□□□□ -0.97
BEST1-201ENST00000378043 TCF23Q7RTU1 214 aa8.99□□□□□ -0.97
BEST1-201ENST00000378043 RHOVQ96L33 236 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms