RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 MARVELD3Q96A59 401 aa9.77□□□□□ -0.85
SYNE1-204ENST00000367248 LYRM2Q9NU23 88 aaPredicted RBP9.77□□□□□ -0.85
SYNE1-204ENST00000367248 PGA5P0DJD9 388 aa9.76□□□□□ -0.85
SYNE1-204ENST00000367248 KRTDAPP60985 99 aa9.76□□□□□ -0.85
SYNE1-204ENST00000367248 IGHV1-18A0A0C4DH31 117 aa9.76□□□□□ -0.85
SYNE1-204ENST00000367248 HELTA6NFD8 242 aa9.76□□□□□ -0.85
SYNE1-204ENST00000367248 IGFBP3P17936 291 aaPredicted RBP9.76□□□□□ -0.85
SYNE1-204ENST00000367248 TMEM187Q14656 261 aa9.76□□□□□ -0.85
SYNE1-204ENST00000367248 WDR73Q6P4I2 378 aa9.76□□□□□ -0.85
SYNE1-204ENST00000367248 FAM24BQ8N5W8 94 aa9.76□□□□□ -0.85
SYNE1-204ENST00000367248 CLRN3Q8NCR9 226 aa9.76□□□□□ -0.85
SYNE1-204ENST00000367248 PTPRFP10586 1907 aa9.76□□□□□ -0.85
SYNE1-204ENST00000367248 CCL1P22362 96 aa9.76□□□□□ -0.85
SYNE1-204ENST00000367248 CRYGSP22914 178 aa9.76□□□□□ -0.85
SYNE1-204ENST00000367248 EEF1AKMT3Q96AZ1 226 aa9.76□□□□□ -0.85
SYNE1-204ENST00000367248 NPFFR1Q9GZQ6 430 aa9.76□□□□□ -0.85
SYNE1-204ENST00000367248 KIAA1324LA8MWY0 1029 aaPredicted RBP9.76□□□□□ -0.85
SYNE1-204ENST00000367248 PDE6DO43924 150 aa9.76□□□□□ -0.85
SYNE1-204ENST00000367248 H1FOOQ8IZA3 346 aaPredicted RBP9.76□□□□□ -0.85
SYNE1-204ENST00000367248 SGK494Q96LW2 274 aa9.76□□□□□ -0.85
SYNE1-204ENST00000367248 CRIM1Q9NZV1 1036 aa9.76□□□□□ -0.85
SYNE1-204ENST00000367248 YTHDF2Q9Y5A9 579 aaKnown RBP9.76□□□□□ -0.85
SYNE1-204ENST00000367248 K7ENP7 123 aa9.76□□□□□ -0.85
SYNE1-204ENST00000367248 RPL7P18124 248 aaKnown RBP9.76□□□□□ -0.85
SYNE1-204ENST00000367248 LRP11Q86VZ4 500 aa9.76□□□□□ -0.85
SYNE1-204ENST00000367248 KLHDC3Q9BQ90 382 aa9.76□□□□□ -0.85
SYNE1-204ENST00000367248 NIT2Q9NQR4 276 aa9.76□□□□□ -0.85
SYNE1-204ENST00000367248 LINC00312Q9Y6C7 94 aa9.76□□□□□ -0.85
SYNE1-204ENST00000367248 IGKV1-9A0A0C4DH69 117 aa9.76□□□□□ -0.85
SYNE1-204ENST00000367248 COX19Q49B96 90 aa9.76□□□□□ -0.85
SYNE1-204ENST00000367248 DPPA3Q6W0C5 159 aa9.76□□□□□ -0.85
SYNE1-204ENST00000367248 FGFBP3Q8TAT2 258 aa9.76□□□□□ -0.85
SYNE1-204ENST00000367248 UBE2L6O14933 153 aa9.75□□□□□ -0.85
SYNE1-204ENST00000367248 ZNF319Q9P2F9 582 aa9.75□□□□□ -0.85
SYNE1-204ENST00000367248 FBLN5Q9UBX5 448 aa9.75□□□□□ -0.85
SYNE1-204ENST00000367248 TMEM262E9PQX1 116 aa9.75□□□□□ -0.85
SYNE1-204ENST00000367248 AWAT1Q58HT5 328 aa9.75□□□□□ -0.85
SYNE1-204ENST00000367248 MIC13Q5XKP0 118 aa9.75□□□□□ -0.85
SYNE1-204ENST00000367248 BPIFA4PQ86YQ2 179 aa9.75□□□□□ -0.85
SYNE1-204ENST00000367248 RSG1Q9BU20 258 aa9.75□□□□□ -0.85
SYNE1-204ENST00000367248 PTTG1IPP53801 180 aa9.75□□□□□ -0.85
SYNE1-204ENST00000367248 PQLC2Q6ZP29 291 aa9.75□□□□□ -0.85
SYNE1-204ENST00000367248 TMEM219Q86XT9 240 aa9.75□□□□□ -0.85
SYNE1-204ENST00000367248 OR5AU1Q8NGC0 362 aa9.75□□□□□ -0.85
SYNE1-204ENST00000367248 TAF15Q92804 592 aaKnown RBP eCLIP9.75□□□□□ -0.85
SYNE1-204ENST00000367248 IL36RNQ9UBH0 155 aa9.75□□□□□ -0.85
SYNE1-204ENST00000367248 TRAV30A0A087WSZ9 112 aa9.75□□□□□ -0.85
SYNE1-204ENST00000367248 SRSF10O75494 262 aaKnown RBP9.75□□□□□ -0.85
SYNE1-204ENST00000367248 ZNF735P0CB33 412 aa9.75□□□□□ -0.85
SYNE1-204ENST00000367248 NPPCP23582 126 aa9.75□□□□□ -0.85
SYNE1-204ENST00000367248 ATP5IP56385 69 aaPredicted RBP9.75□□□□□ -0.85
SYNE1-204ENST00000367248 FAM74A4Q5TZK3 123 aa9.75□□□□□ -0.85
SYNE1-204ENST00000367248 FAM166AQ6J272 317 aa9.75□□□□□ -0.85
SYNE1-204ENST00000367248 STPG2Q8N412 459 aa9.75□□□□□ -0.85
SYNE1-204ENST00000367248 STPG3Q8N7X2 389 aa9.75□□□□□ -0.85
SYNE1-204ENST00000367248 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.75□□□□□ -0.85
SYNE1-204ENST00000367248 SNCGO76070 127 aa9.75□□□□□ -0.85
SYNE1-204ENST00000367248 CLEC19AQ6UXS0 136 aa9.75□□□□□ -0.85
SYNE1-204ENST00000367248 SLC16A13Q7RTY0 426 aa9.75□□□□□ -0.85
SYNE1-204ENST00000367248 ZSWIM8A7E2V4 1837 aa9.75□□□□□ -0.85
SYNE1-204ENST00000367248 HSPB1P04792 205 aaKnown RBP9.75□□□□□ -0.85
SYNE1-204ENST00000367248 LDLRAD3Q86YD5 345 aa9.75□□□□□ -0.85
SYNE1-204ENST00000367248 PLPPR1Q8TBJ4 325 aa9.75□□□□□ -0.85
SYNE1-204ENST00000367248 OR2T8A6NH00 312 aa9.74□□□□□ -0.85
SYNE1-204ENST00000367248 IGHG3P01860 377 aa9.74□□□□□ -0.85
SYNE1-204ENST00000367248 BCL2P10415 239 aa9.74□□□□□ -0.85
SYNE1-204ENST00000367248 AMMECR1LQ6DCA0 310 aa9.74□□□□□ -0.85
SYNE1-204ENST00000367248 FER1L5A0AVI2 2057 aa9.74□□□□□ -0.85
SYNE1-204ENST00000367248 ATRXP46100 2492 aa9.74□□□□□ -0.85
SYNE1-204ENST00000367248 CXCL2P19875 107 aa9.74□□□□□ -0.85
SYNE1-204ENST00000367248 HIST1H1AQ02539 215 aaPredicted RBP9.74□□□□□ -0.85
SYNE1-204ENST00000367248 NEUROG1Q92886 237 aa9.74□□□□□ -0.85
SYNE1-204ENST00000367248 MOSP00540 346 aa9.74□□□□□ -0.85
SYNE1-204ENST00000367248 GPR183P32249 361 aa9.74□□□□□ -0.85
SYNE1-204ENST00000367248 SLC25A33Q9BSK2 321 aa9.74□□□□□ -0.85
SYNE1-204ENST00000367248 CHD5Q8TDI0 1954 aa9.74□□□□□ -0.85
SYNE1-204ENST00000367248 PLA2G2CQ5R387 149 aa9.74□□□□□ -0.85
SYNE1-204ENST00000367248 RTN4RL2Q86UN3 420 aa9.74□□□□□ -0.85
SYNE1-204ENST00000367248 TXNDC17Q9BRA2 123 aa9.74□□□□□ -0.85
SYNE1-204ENST00000367248 PSME4Q14997 1843 aa9.74□□□□□ -0.85
SYNE1-204ENST00000367248 HIST1H3AP68431 136 aa9.74□□□□□ -0.85
SYNE1-204ENST00000367248 WDR82Q6UXN9 313 aa9.74□□□□□ -0.85
SYNE1-204ENST00000367248 PPP1R27Q86WC6 154 aa9.74□□□□□ -0.85
SYNE1-204ENST00000367248 NHLRC2Q8NBF2 726 aa9.74□□□□□ -0.85
SYNE1-204ENST00000367248 SLC25A28Q96A46 364 aa9.74□□□□□ -0.85
SYNE1-204ENST00000367248 LYZL4Q96KX0 146 aa9.74□□□□□ -0.85
SYNE1-204ENST00000367248 TP53RKQ96S44 253 aa9.74□□□□□ -0.85
SYNE1-204ENST00000367248 DMRTA2Q96SC8 542 aa9.74□□□□□ -0.85
SYNE1-204ENST00000367248 TRAF4Q9BUZ4 470 aaPredicted RBP9.74□□□□□ -0.85
SYNE1-204ENST00000367248 OR5AL1P0C617 328 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 SRD5A1P18405 259 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 ZNF672Q499Z4 452 aaPredicted RBP9.73□□□□□ -0.85
SYNE1-204ENST00000367248 ZNF841Q6ZN19 808 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 NABP1Q96AH0 204 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 GAS1P54826 345 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 RALGAPA2Q2PPJ7 1873 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 TMEM8BA6NDV4 472 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 ZNF146Q15072 292 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 CYB5R2Q6BCY4 276 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 ST6GALNAC3Q8NDV1 305 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms