RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 ZNF124Q15973 351 aa14.97□□□□□ -0.01
CACNA1A-201ENST00000360228 LDLRAD2Q5SZI1 272 aa14.97□□□□□ -0.01
CACNA1A-201ENST00000360228 NAV3Q8IVL0 2385 aa14.96□□□□□ -0.01
CACNA1A-201ENST00000360228 SFTA2Q6UW10 78 aa14.96□□□□□ -0.01
CACNA1A-201ENST00000360228 CCL13Q99616 98 aa14.96□□□□□ -0.01
CACNA1A-201ENST00000360228 SIPA1L1O43166 1804 aa14.96□□□□□ -0.01
CACNA1A-201ENST00000360228 LIPT2A6NK58 231 aa14.96□□□□□ -0.01
CACNA1A-201ENST00000360228 S100A7L2Q5SY68 101 aa14.96□□□□□ -0.01
CACNA1A-201ENST00000360228 DUX3Q96PT4 197 aa14.96□□□□□ -0.01
CACNA1A-201ENST00000360228 SPANXDQ9BXN6 97 aa14.96□□□□□ -0.01
CACNA1A-201ENST00000360228 AGRNO00468 2067 aa14.96□□□□□ -0.01
CACNA1A-201ENST00000360228 KLK13Q9UKR3 277 aa14.96□□□□□ -0.01
CACNA1A-201ENST00000360228 HIST1H4AP62805 103 aaKnown RBP14.96□□□□□ -0.01
CACNA1A-201ENST00000360228 V9GYH0 126 aa14.96□□□□□ -0.01
CACNA1A-201ENST00000360228 GCM2O75603 506 aaPredicted RBP14.96□□□□□ -0.02
CACNA1A-201ENST00000360228 DXOO77932 396 aaKnown RBP14.96□□□□□ -0.02
CACNA1A-201ENST00000360228 TPRX1Q8N7U7 411 aa14.96□□□□□ -0.02
CACNA1A-201ENST00000360228 SNAI3Q3KNW1 292 aa14.96□□□□□ -0.02
CACNA1A-201ENST00000360228 CD300LDQ6UXZ3 194 aa14.96□□□□□ -0.02
CACNA1A-201ENST00000360228 LHX9Q9NQ69 397 aa14.96□□□□□ -0.02
CACNA1A-201ENST00000360228 PLSCR4Q9NRQ2 329 aa14.96□□□□□ -0.02
CACNA1A-201ENST00000360228 TMEM229AB2RXF0 380 aa14.95□□□□□ -0.02
CACNA1A-201ENST00000360228 RND2P52198 227 aa14.95□□□□□ -0.02
CACNA1A-201ENST00000360228 FBLN7Q53RD9 439 aa14.95□□□□□ -0.02
CACNA1A-201ENST00000360228 C1orf210Q8IVY1 113 aa14.95□□□□□ -0.02
CACNA1A-201ENST00000360228 TIMM23BQ5SRD1 257 aa14.95□□□□□ -0.02
CACNA1A-201ENST00000360228 SH3BGRL3Q9H299 93 aa14.95□□□□□ -0.02
CACNA1A-201ENST00000360228 PLSCR2Q9NRY7 297 aa14.95□□□□□ -0.02
CACNA1A-201ENST00000360228 SPANXCQ9NY87 97 aa14.95□□□□□ -0.02
CACNA1A-201ENST00000360228 SYNGR3O43761 229 aa14.95□□□□□ -0.02
CACNA1A-201ENST00000360228 HTN3P15516 51 aa14.95□□□□□ -0.02
CACNA1A-201ENST00000360228 IGLV3-27P01718 113 aa14.95□□□□□ -0.02
CACNA1A-201ENST00000360228 OR51G1Q8NGK1 321 aa14.95□□□□□ -0.02
CACNA1A-201ENST00000360228 ST6GALNAC6Q969X2 333 aa14.95□□□□□ -0.02
CACNA1A-201ENST00000360228 TRAV8-1A0A0A6YYK1 113 aa14.95□□□□□ -0.02
CACNA1A-201ENST00000360228 H3BTX0 84 aa14.95□□□□□ -0.02
CACNA1A-201ENST00000360228 J3QT63 122 aa14.95□□□□□ -0.02
CACNA1A-201ENST00000360228 ATXN7O15265 892 aaPredicted RBP14.95□□□□□ -0.02
CACNA1A-201ENST00000360228 A8MWV9 139 aa14.95□□□□□ -0.02
CACNA1A-201ENST00000360228 CRYBB3P26998 211 aa14.95□□□□□ -0.02
CACNA1A-201ENST00000360228 ORAOV1Q8WV07 137 aa14.95□□□□□ -0.02
CACNA1A-201ENST00000360228 ZNF658BQ4V348 819 aaPredicted RBP14.95□□□□□ -0.02
CACNA1A-201ENST00000360228 TMEM196Q5HYL7 178 aa14.95□□□□□ -0.02
CACNA1A-201ENST00000360228 Q6ZS52 159 aa14.95□□□□□ -0.02
CACNA1A-201ENST00000360228 HELZP42694 1942 aaKnown RBP14.95□□□□□ -0.02
CACNA1A-201ENST00000360228 PGFP49763 221 aa14.94□□□□□ -0.02
CACNA1A-201ENST00000360228 INO80CQ6PI98 192 aaPredicted RBP14.94□□□□□ -0.02
CACNA1A-201ENST00000360228 ITLN2Q8WWU7 325 aaPredicted RBP14.94□□□□□ -0.02
CACNA1A-201ENST00000360228 RSPO2Q6UXX9 243 aaPredicted RBP14.94□□□□□ -0.02
CACNA1A-201ENST00000360228 RASL10BQ96S79 203 aa14.94□□□□□ -0.02
CACNA1A-201ENST00000360228 SF3B5Q9BWJ5 86 aaKnown RBP14.94□□□□□ -0.02
CACNA1A-201ENST00000360228 ZNF257Q9Y2Q1 563 aa14.94□□□□□ -0.02
CACNA1A-201ENST00000360228 NBASA2RRP1 2371 aa14.94□□□□□ -0.02
CACNA1A-201ENST00000360228 TRBV5-4A0A0C4DH59 114 aa14.94□□□□□ -0.02
CACNA1A-201ENST00000360228 FCARP24071 287 aa14.94□□□□□ -0.02
CACNA1A-201ENST00000360228 DNM1P46Q6ZS02 220 aa14.94□□□□□ -0.02
CACNA1A-201ENST00000360228 EEF1AKMT3Q96AZ1 226 aa14.94□□□□□ -0.02
CACNA1A-201ENST00000360228 PLXNA2O75051 1894 aa14.94□□□□□ -0.02
CACNA1A-201ENST00000360228 HOXA3O43365 443 aaPredicted RBP14.94□□□□□ -0.02
CACNA1A-201ENST00000360228 ZNF48Q96MX3 618 aaPredicted RBP14.94□□□□□ -0.02
CACNA1A-201ENST00000360228 A0A0U1RQV5 110 aa14.94□□□□□ -0.02
CACNA1A-201ENST00000360228 CBLN1P23435 193 aa14.94□□□□□ -0.02
CACNA1A-201ENST00000360228 PLNP26678 52 aa14.94□□□□□ -0.02
CACNA1A-201ENST00000360228 GLIPR1P48060 266 aa14.94□□□□□ -0.02
CACNA1A-201ENST00000360228 CXorf66Q5JRM2 361 aaPredicted RBP14.94□□□□□ -0.02
CACNA1A-201ENST00000360228 FNDC4Q9H6D8 234 aaPredicted RBP14.94□□□□□ -0.02
CACNA1A-201ENST00000360228 IGHV3-48P01763 117 aa14.94□□□□□ -0.02
CACNA1A-201ENST00000360228 SPSB4Q96A44 273 aa14.94□□□□□ -0.02
CACNA1A-201ENST00000360228 UCN2Q96RP3 112 aa14.94□□□□□ -0.02
CACNA1A-201ENST00000360228 TICRRQ7Z2Z1 1910 aa14.94□□□□□ -0.02
CACNA1A-201ENST00000360228 IGHV3-66A0A0C4DH42 116 aa14.93□□□□□ -0.02
CACNA1A-201ENST00000360228 A0A1B0GW15 77 aa14.93□□□□□ -0.02
CACNA1A-201ENST00000360228 CT62P0C5K7 136 aa14.93□□□□□ -0.02
CACNA1A-201ENST00000360228 WDR82Q6UXN9 313 aa14.93□□□□□ -0.02
CACNA1A-201ENST00000360228 UNQ9370/PRO34162Q6UXP9 181 aa14.93□□□□□ -0.02
CACNA1A-201ENST00000360228 SHISA5Q8N114 240 aa14.93□□□□□ -0.02
CACNA1A-201ENST00000360228 GSN-AS1Q9NRJ2 163 aa14.93□□□□□ -0.02
CACNA1A-201ENST00000360228 TRAV30A0A087WSZ9 112 aa14.93□□□□□ -0.02
CACNA1A-201ENST00000360228 ZNF488Q96MN9 340 aa14.93□□□□□ -0.02
CACNA1A-201ENST00000360228 CCL19Q99731 98 aa14.93□□□□□ -0.02
CACNA1A-201ENST00000360228 RBM38Q9H0Z9 239 aaKnown RBP14.93□□□□□ -0.02
CACNA1A-201ENST00000360228 PGPEP1LA6NFU8 196 aa14.93□□□□□ -0.02
CACNA1A-201ENST00000360228 ISG15P05161 165 aa14.93□□□□□ -0.02
CACNA1A-201ENST00000360228 WNT2BQ93097 391 aa14.93□□□□□ -0.02
CACNA1A-201ENST00000360228 C1QL1O75973 258 aa14.93□□□□□ -0.02
CACNA1A-201ENST00000360228 ACSF3Q4G176 576 aaPredicted RBP14.93□□□□□ -0.02
CACNA1A-201ENST00000360228 VGLL1Q99990 258 aa14.93□□□□□ -0.02
CACNA1A-201ENST00000360228 TMEM240Q5SV17 173 aa14.93□□□□□ -0.02
CACNA1A-201ENST00000360228 CA11O75493 328 aa14.93□□□□□ -0.02
CACNA1A-201ENST00000360228 NPPCP23582 126 aa14.93□□□□□ -0.02
CACNA1A-201ENST00000360228 RNASE4P34096 147 aaKnown RBP14.93□□□□□ -0.02
CACNA1A-201ENST00000360228 DMKNQ6E0U4 476 aaPredicted RBP14.93□□□□□ -0.02
CACNA1A-201ENST00000360228 CRPP02741 224 aa14.93□□□□□ -0.02
CACNA1A-201ENST00000360228 RNF182Q8N6D2 247 aa14.93□□□□□ -0.02
CACNA1A-201ENST00000360228 KCNE1BA0A087WTH5 132 aa14.92□□□□□ -0.02
CACNA1A-201ENST00000360228 PEX7O00628 323 aa14.92□□□□□ -0.02
CACNA1A-201ENST00000360228 GAGE13Q4V321 117 aa14.92□□□□□ -0.02
CACNA1A-201ENST00000360228 CENPWQ5EE01 88 aa14.92□□□□□ -0.02
CACNA1A-201ENST00000360228 OGG1O15527 345 aa14.92□□□□□ -0.02
CACNA1A-201ENST00000360228 LINC00305Q7Z4B0 112 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms