RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 GGNBP1Q5YKI7 109 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 DHRS7BQ6IAN0 325 aaPredicted RBP5.62□□□□□ -1.51
VPS13A-201ENST00000355766 ACOT7LQ6ZUV0 252 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 TCF23Q7RTU1 214 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 FAM71E2Q8N5Q1 922 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 KIR3DL3Q8N743 410 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 SLC35G3Q8N808 338 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 BOLLQ8N9W6 283 aaKnown RBP5.62□□□□□ -1.51
VPS13A-201ENST00000355766 INO80EQ8NBZ0 244 aaPredicted RBP5.62□□□□□ -1.51
VPS13A-201ENST00000355766 ZNF439Q8NDP4 499 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 OR11H4Q8NGC9 324 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 OR8B3Q8NGG8 313 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 OR8U1Q8NH10 309 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 PHYHIPLQ96FC7 376 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 OR8B2Q96RD0 313 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 TP53RKQ96S44 253 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 CCL13Q99616 98 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 AIFM2Q9BRQ8 373 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 TMEM246Q9BRR3 403 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 CHIAQ9BZP6 476 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 MFFQ9GZY8 342 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 OR2D2Q9H210 308 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 IFI27L2Q9H2X8 130 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 PLEKHA2Q9HB19 425 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 CCL28Q9NRJ3 127 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 IDI2-AS1Q9NZ38 188 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 NUP50Q9UKX7 468 aa5.62□□□□□ -1.51
VPS13A-201ENST00000355766 RBM7Q9Y580 266 aaKnown RBP5.62□□□□□ -1.51
VPS13A-201ENST00000355766 FXYD6-FXYD2A0A087WZ82 144 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 TRAV14DV4A0A0A6YYC5 116 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 C17orf98A8MV24 154 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 A8MXK9 166 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 FAM25EA8MYX2 175 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 E5RGE8 158 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 F5H0A9 414 aaPredicted RBP5.61□□□□□ -1.51
VPS13A-201ENST00000355766 L7N2F9 121 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 DVL1O14640 695 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 TAAR5O14804 337 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 ARPC5O15511 151 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 ST8SIA3O43173 380 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 TXNL1O43396 289 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 DEDDO75618 318 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 ADAP1O75689 374 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 SPDEFO95238 335 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 IFNA7P01567 189 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 NDUFB7P17568 137 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 PVALBP20472 110 aaPredicted RBP5.61□□□□□ -1.51
VPS13A-201ENST00000355766 IL3RAP26951 378 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 PPP1CCP36873 323 aaKnown RBP5.61□□□□□ -1.51
VPS13A-201ENST00000355766 GPR12P47775 334 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 NKX2-5P52952 324 aaPredicted RBP5.61□□□□□ -1.51
VPS13A-201ENST00000355766 AP2S1P53680 142 aaPredicted RBP5.61□□□□□ -1.51
VPS13A-201ENST00000355766 LGALS4P56470 323 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 KLF17Q5JT82 389 aaPredicted RBP5.61□□□□□ -1.51
VPS13A-201ENST00000355766 AVPI1Q5T686 147 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 GPR157Q5UAW9 335 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 TMEM268Q5VZI3 342 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 C1orf122Q6ZSJ8 110 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 SLC25A48Q6ZT89 311 aaKnown RBP5.61□□□□□ -1.51
VPS13A-201ENST00000355766 ZNF546Q86UE3 836 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 SLC51BQ86UW2 128 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 SELENOHQ8IZQ5 122 aaKnown RBP5.61□□□□□ -1.51
VPS13A-201ENST00000355766 PRR18Q8N4B5 295 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 KCNRGQ8N5I3 272 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 DEFB108BQ8NET1 73 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 OR52L2PQ8NGH6 319 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 OR4D5Q8NGN0 318 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 STOML3Q8TAV4 291 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 DCTN5Q9BTE1 182 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 NSG2Q9Y328 171 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 PRELID3BQ9Y3B1 194 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 POMT1Q9Y6A1 747 aa5.61□□□□□ -1.51
VPS13A-201ENST00000355766 EPPK1P58107 5090 aaKnown RBP5.6□□□□□ -1.51
VPS13A-201ENST00000355766 PPIAL4CA0A0B4J2A2 164 aa5.6□□□□□ -1.51
VPS13A-201ENST00000355766 C13orf42A0A1B0GVH6 325 aa5.6□□□□□ -1.51
VPS13A-201ENST00000355766 KANTRA0A1W2PQU2 76 aa5.6□□□□□ -1.51
VPS13A-201ENST00000355766 RNF222A6NCQ9 220 aa5.6□□□□□ -1.51
VPS13A-201ENST00000355766 SMLR1H3BR10 107 aa5.6□□□□□ -1.51
VPS13A-201ENST00000355766 M0R1W7 72 aa5.6□□□□□ -1.51
VPS13A-201ENST00000355766 HSD17B6O14756 317 aa5.6□□□□□ -1.51
VPS13A-201ENST00000355766 BCL2L11O43521 198 aa5.6□□□□□ -1.51
VPS13A-201ENST00000355766 PITX3O75364 302 aa5.6□□□□□ -1.51
VPS13A-201ENST00000355766 SIX6O95475 246 aa5.6□□□□□ -1.51
VPS13A-201ENST00000355766 HPRT1P00492 218 aa5.6□□□□□ -1.51
VPS13A-201ENST00000355766 GAPDHP04406 335 aaKnown RBP5.6□□□□□ -1.51
VPS13A-201ENST00000355766 LIPFP07098 398 aa5.6□□□□□ -1.51
VPS13A-201ENST00000355766 HOXB5P09067 269 aa5.6□□□□□ -1.51
VPS13A-201ENST00000355766 P0C879 139 aa5.6□□□□□ -1.51
VPS13A-201ENST00000355766 RRASP10301 218 aa5.6□□□□□ -1.51
VPS13A-201ENST00000355766 EGR2P11161 476 aaPredicted RBP5.6□□□□□ -1.51
VPS13A-201ENST00000355766 DUTP33316 252 aaKnown RBP5.6□□□□□ -1.51
VPS13A-201ENST00000355766 NKX2-1P43699 371 aaPredicted RBP5.6□□□□□ -1.51
VPS13A-201ENST00000355766 P2RY1P47900 373 aa5.6□□□□□ -1.51
VPS13A-201ENST00000355766 THBS3P49746 956 aa5.6□□□□□ -1.51
VPS13A-201ENST00000355766 DLX6P56179 175 aa5.6□□□□□ -1.51
VPS13A-201ENST00000355766 TAS2R30P59541 319 aa5.6□□□□□ -1.51
VPS13A-201ENST00000355766 BAXQ07812 192 aa5.6□□□□□ -1.51
VPS13A-201ENST00000355766 GNMTQ14749 295 aa5.6□□□□□ -1.51
VPS13A-201ENST00000355766 POU2AF1Q16633 256 aa5.6□□□□□ -1.51
VPS13A-201ENST00000355766 LGALSLQ3ZCW2 172 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms