RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 NDUFA2O43678 99 aa9.12□□□□□ -0.95
SVIP-201ENST00000354193 SNRNP70P08621 437 aaKnown RBP9.12□□□□□ -0.95
SVIP-201ENST00000354193 CFHR2P36980 270 aa9.12□□□□□ -0.95
SVIP-201ENST00000354193 UBE2G2P60604 165 aa9.12□□□□□ -0.95
SVIP-201ENST00000354193 ARSJQ5FYB0 599 aaPredicted RBP9.12□□□□□ -0.95
SVIP-201ENST00000354193 WDR25Q64LD2 544 aaPredicted RBP9.12□□□□□ -0.95
SVIP-201ENST00000354193 ZNF383Q8NA42 475 aa9.12□□□□□ -0.95
SVIP-201ENST00000354193 MISP3Q96FF7 219 aa9.12□□□□□ -0.95
SVIP-201ENST00000354193 SSBP3Q9BWW4 388 aaPredicted RBP9.12□□□□□ -0.95
SVIP-201ENST00000354193 LPAR3Q9UBY5 353 aa9.12□□□□□ -0.95
SVIP-201ENST00000354193 TCF19Q9Y242 345 aa9.12□□□□□ -0.95
SVIP-201ENST00000354193 OR51B2Q9Y5P1 312 aa9.12□□□□□ -0.95
SVIP-201ENST00000354193 ID3Q02535 119 aa9.11□□□□□ -0.95
SVIP-201ENST00000354193 BPIFCQ8NFQ6 507 aa9.11□□□□□ -0.95
SVIP-201ENST00000354193 OR10A7Q8NGE5 316 aa9.11□□□□□ -0.95
SVIP-201ENST00000354193 LIPFP07098 398 aa9.11□□□□□ -0.95
SVIP-201ENST00000354193 LOXP28300 417 aaPredicted RBP9.11□□□□□ -0.95
SVIP-201ENST00000354193 PLA2G5P39877 138 aa9.11□□□□□ -0.95
SVIP-201ENST00000354193 CIB3Q96Q77 187 aaPredicted RBP9.11□□□□□ -0.95
SVIP-201ENST00000354193 S4R3C0 116 aa9.11□□□□□ -0.95
SVIP-201ENST00000354193 UTP20O75691 2785 aaKnown RBP9.11□□□□□ -0.95
SVIP-201ENST00000354193 ATF4P18848 351 aaPredicted RBP9.11□□□□□ -0.95
SVIP-201ENST00000354193 OPRK1P41145 380 aa9.11□□□□□ -0.95
SVIP-201ENST00000354193 MST1LQ2TV78 715 aa9.11□□□□□ -0.95
SVIP-201ENST00000354193 OR10W1Q8NGF6 305 aa9.11□□□□□ -0.95
SVIP-201ENST00000354193 C5orf30Q96GV9 206 aa9.11□□□□□ -0.95
SVIP-201ENST00000354193 MIOXQ9UGB7 285 aa9.11□□□□□ -0.95
SVIP-201ENST00000354193 SPENQ96T58 3664 aaKnown RBP9.1□□□□□ -0.95
SVIP-201ENST00000354193 COX6B1P14854 86 aa9.1□□□□□ -0.95
SVIP-201ENST00000354193 RPP30P78346 268 aaKnown RBP9.1□□□□□ -0.95
SVIP-201ENST00000354193 TUSC1Q2TAM9 212 aa9.1□□□□□ -0.95
SVIP-201ENST00000354193 VMA21Q3ZAQ7 101 aa9.1□□□□□ -0.95
SVIP-201ENST00000354193 HEPN1Q6WQI6 88 aa9.1□□□□□ -0.95
SVIP-201ENST00000354193 LRTM2Q8N967 370 aa9.1□□□□□ -0.95
SVIP-201ENST00000354193 SUN5Q8TC36 379 aa9.1□□□□□ -0.95
SVIP-201ENST00000354193 ATP5SQ99766 215 aa9.1□□□□□ -0.95
SVIP-201ENST00000354193 AGMATQ9BSE5 352 aa9.1□□□□□ -0.95
SVIP-201ENST00000354193 FAM103A1Q9BTL3 118 aaKnown RBP9.1□□□□□ -0.95
SVIP-201ENST00000354193 LOXL3P58215 753 aa9.1□□□□□ -0.95
SVIP-201ENST00000354193 ERHP84090 104 aaKnown RBP9.1□□□□□ -0.95
SVIP-201ENST00000354193 FFAR4Q5NUL3 377 aa9.1□□□□□ -0.95
SVIP-201ENST00000354193 BTNL8Q6UX41 500 aa9.1□□□□□ -0.95
SVIP-201ENST00000354193 ADTRPQ96IZ2 230 aa9.1□□□□□ -0.95
SVIP-201ENST00000354193 CLEC7AQ9BXN2 247 aa9.1□□□□□ -0.95
SVIP-201ENST00000354193 FBXL15Q9H469 300 aa9.1□□□□□ -0.95
SVIP-201ENST00000354193 SLC25A6P12236 298 aa9.1□□□□□ -0.95
SVIP-201ENST00000354193 PJVKQ0ZLH3 352 aa9.1□□□□□ -0.95
SVIP-201ENST00000354193 SRSF7Q16629 238 aaKnown RBP eCLIP9.1□□□□□ -0.95
SVIP-201ENST00000354193 C3orf36Q3SXR2 165 aa9.1□□□□□ -0.95
SVIP-201ENST00000354193 GNPNAT1Q96EK6 184 aaPredicted RBP9.1□□□□□ -0.95
SVIP-201ENST00000354193 NPY1RP25929 384 aa9.1□□□□□ -0.95
SVIP-201ENST00000354193 RAB31Q13636 194 aa9.1□□□□□ -0.95
SVIP-201ENST00000354193 CLEC2AQ6UVW9 174 aa9.1□□□□□ -0.95
SVIP-201ENST00000354193 LSM10Q969L4 123 aaKnown RBP9.1□□□□□ -0.95
SVIP-201ENST00000354193 CYTL1Q9NRR1 136 aa9.1□□□□□ -0.95
SVIP-201ENST00000354193 DUXBA0A1W2PPF3 345 aa9.09□□□□□ -0.95
SVIP-201ENST00000354193 A0A1W2PPR1 153 aa9.09□□□□□ -0.95
SVIP-201ENST00000354193 IGHV1-8P0DP01 117 aa9.09□□□□□ -0.95
SVIP-201ENST00000354193 PROP1O75360 226 aa9.09□□□□□ -0.95
SVIP-201ENST00000354193 IGLV2-14P01704 120 aa9.09□□□□□ -0.95
SVIP-201ENST00000354193 SAA1P0DJI8 122 aaPredicted RBP9.09□□□□□ -0.95
SVIP-201ENST00000354193 ARL16Q0P5N6 197 aa9.09□□□□□ -0.95
SVIP-201ENST00000354193 STPG2Q8N412 459 aa9.09□□□□□ -0.95
SVIP-201ENST00000354193 TMEM204Q9BSN7 226 aa9.09□□□□□ -0.95
SVIP-201ENST00000354193 PBDC1Q9BVG4 233 aa9.09□□□□□ -0.95
SVIP-201ENST00000354193 TMEM133Q9H2Q1 129 aa9.09□□□□□ -0.95
SVIP-201ENST00000354193 CHODLQ9H9P2 273 aa9.09□□□□□ -0.95
SVIP-201ENST00000354193 RPS10P5Q9NQ39 176 aa9.09□□□□□ -0.95
SVIP-201ENST00000354193 KIAA1456Q9P272 454 aa9.09□□□□□ -0.95
SVIP-201ENST00000354193 WSB1Q9Y6I7 421 aa9.09□□□□□ -0.95
SVIP-201ENST00000354193 HTR1DP28221 377 aa9.09□□□□□ -0.95
SVIP-201ENST00000354193 TLE4Q04727 773 aa9.09□□□□□ -0.95
SVIP-201ENST00000354193 IL22RA2Q969J5 263 aa9.09□□□□□ -0.95
SVIP-201ENST00000354193 DCHS2Q6V1P9 2916 aa9.09□□□□□ -0.96
SVIP-201ENST00000354193 MEF2CQ06413 473 aaPredicted RBP9.08□□□□□ -0.96
SVIP-201ENST00000354193 ZNF787Q6DD87 383 aa9.08□□□□□ -0.96
SVIP-201ENST00000354193 C22orf46C9J442 243 aa9.08□□□□□ -0.96
SVIP-201ENST00000354193 YIF1AO95070 293 aa9.08□□□□□ -0.96
SVIP-201ENST00000354193 OR5G3P0C626 314 aa9.08□□□□□ -0.96
SVIP-201ENST00000354193 GATA2P23769 480 aaPredicted RBP9.08□□□□□ -0.96
SVIP-201ENST00000354193 PPOXP50336 477 aa9.08□□□□□ -0.96
SVIP-201ENST00000354193 RPL8P62917 257 aaKnown RBP9.08□□□□□ -0.96
SVIP-201ENST00000354193 SRSF3P84103 164 aaKnown RBP9.08□□□□□ -0.96
SVIP-201ENST00000354193 Q8TCH9 128 aa9.08□□□□□ -0.96
SVIP-201ENST00000354193 NEU4Q8WWR8 484 aaPredicted RBP9.08□□□□□ -0.96
SVIP-201ENST00000354193 PHYHIPLQ96FC7 376 aa9.08□□□□□ -0.96
SVIP-201ENST00000354193 BBC3Q96PG8 261 aaPredicted RBP9.08□□□□□ -0.96
SVIP-201ENST00000354193 RRHO14718 337 aa9.08□□□□□ -0.96
SVIP-201ENST00000354193 CT45A6P0DMU7 189 aa9.08□□□□□ -0.96
SVIP-201ENST00000354193 CT45A5P0DMU8 189 aa9.08□□□□□ -0.96
SVIP-201ENST00000354193 CT45A7P0DMV0 189 aa9.08□□□□□ -0.96
SVIP-201ENST00000354193 LHFPL4Q7Z7J7 247 aa9.08□□□□□ -0.96
SVIP-201ENST00000354193 METTL1Q9UBP6 276 aaKnown RBP9.08□□□□□ -0.96
SVIP-201ENST00000354193 RPH3ALQ9UNE2 315 aa9.08□□□□□ -0.96
SVIP-201ENST00000354193 IGHV3-35A0A0C4DH35 117 aa9.08□□□□□ -0.96
SVIP-201ENST00000354193 F2RL2O00254 374 aa9.08□□□□□ -0.96
SVIP-201ENST00000354193 TFF3Q07654 80 aa9.08□□□□□ -0.96
SVIP-201ENST00000354193 GUK1Q16774 197 aa9.08□□□□□ -0.96
SVIP-201ENST00000354193 SLC24A4Q8NFF2 622 aa9.08□□□□□ -0.96
SVIP-201ENST00000354193 FAM222BQ8WU58 562 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms