RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 ZNF436Q9C0F3 470 aaPredicted RBP12.37□□□□□ -0.43
TRA2B-202ENST00000342294 CSTL1Q9H114 145 aa12.37□□□□□ -0.43
TRA2B-202ENST00000342294 OR51E2Q9H255 320 aa12.37□□□□□ -0.43
TRA2B-202ENST00000342294 DYNC1H1Q14204 4646 aaKnown RBP12.36□□□□□ -0.43
TRA2B-202ENST00000342294 IGLV11-55A0A075B6I3 123 aa12.36□□□□□ -0.43
TRA2B-202ENST00000342294 DPPA5A6NC42 116 aa12.36□□□□□ -0.43
TRA2B-202ENST00000342294 EFCAB10A6NFE3 127 aa12.36□□□□□ -0.43
TRA2B-202ENST00000342294 IGLL5B9A064 214 aa12.36□□□□□ -0.43
TRA2B-202ENST00000342294 HIST1H1BP16401 226 aaKnown RBP12.36□□□□□ -0.43
TRA2B-202ENST00000342294 RPL27AP46776 148 aaKnown RBP12.36□□□□□ -0.43
TRA2B-202ENST00000342294 RASSF2P50749 326 aa12.36□□□□□ -0.43
TRA2B-202ENST00000342294 MFAP2P55001 183 aa12.36□□□□□ -0.43
TRA2B-202ENST00000342294 ST3GAL4Q11206 333 aa12.36□□□□□ -0.43
TRA2B-202ENST00000342294 RBM48Q5RL73 367 aaKnown RBP12.36□□□□□ -0.43
TRA2B-202ENST00000342294 OR11H2Q8NH07 326 aa12.36□□□□□ -0.43
TRA2B-202ENST00000342294 OR5B3Q8NH48 314 aa12.36□□□□□ -0.43
TRA2B-202ENST00000342294 DNAH17Q9UFH2 4485 aa12.36□□□□□ -0.43
TRA2B-202ENST00000342294 DNAH11Q96DT5 4516 aa12.36□□□□□ -0.43
TRA2B-202ENST00000342294 IGHV3-35A0A0C4DH35 117 aa12.35□□□□□ -0.43
TRA2B-202ENST00000342294 PRSS29PA6NIE9 313 aa12.35□□□□□ -0.43
TRA2B-202ENST00000342294 MPTX1A8MV57 137 aa12.35□□□□□ -0.43
TRA2B-202ENST00000342294 RTL8CO15255 209 aa12.35□□□□□ -0.43
TRA2B-202ENST00000342294 CIB2O75838 187 aa12.35□□□□□ -0.43
TRA2B-202ENST00000342294 DHFRP00374 187 aa12.35□□□□□ -0.43
TRA2B-202ENST00000342294 CDK1P06493 297 aa12.35□□□□□ -0.43
TRA2B-202ENST00000342294 P2RY14Q15391 338 aa12.35□□□□□ -0.43
TRA2B-202ENST00000342294 VKORC1L1Q8N0U8 176 aa12.35□□□□□ -0.43
TRA2B-202ENST00000342294 TMEM167AQ8TBQ9 72 aa12.35□□□□□ -0.43
TRA2B-202ENST00000342294 ZNF502Q8TBZ5 544 aa12.35□□□□□ -0.43
TRA2B-202ENST00000342294 CD300LFQ8TDQ1 290 aa12.35□□□□□ -0.43
TRA2B-202ENST00000342294 CXorf58Q96LI9 332 aa12.35□□□□□ -0.43
TRA2B-202ENST00000342294 KCNK7Q9Y2U2 307 aa12.35□□□□□ -0.43
TRA2B-202ENST00000342294 RBM7Q9Y580 266 aaKnown RBP12.35□□□□□ -0.43
TRA2B-202ENST00000342294 OR4C46A6NHA9 309 aa12.34□□□□□ -0.43
TRA2B-202ENST00000342294 FCGR3BO75015 233 aa12.34□□□□□ -0.43
TRA2B-202ENST00000342294 KBTBD11O94819 623 aa12.34□□□□□ -0.43
TRA2B-202ENST00000342294 FCGR3AP08637 254 aa12.34□□□□□ -0.43
TRA2B-202ENST00000342294 GPR183P32249 361 aa12.34□□□□□ -0.43
TRA2B-202ENST00000342294 MAS1LP35410 378 aa12.34□□□□□ -0.43
TRA2B-202ENST00000342294 WNT4P56705 351 aa12.34□□□□□ -0.43
TRA2B-202ENST00000342294 LAMTOR1Q6IAA8 161 aa12.34□□□□□ -0.43
TRA2B-202ENST00000342294 ZFP1Q6P2D0 407 aa12.34□□□□□ -0.43
TRA2B-202ENST00000342294 APRG1Q8IVJ8 170 aa12.34□□□□□ -0.43
TRA2B-202ENST00000342294 H1FOOQ8IZA3 346 aaPredicted RBP12.34□□□□□ -0.43
TRA2B-202ENST00000342294 PUSL1Q8N0Z8 303 aaKnown RBP12.34□□□□□ -0.43
TRA2B-202ENST00000342294 TMEM190Q8WZ59 177 aa12.34□□□□□ -0.43
TRA2B-202ENST00000342294 GFI1Q99684 422 aa12.34□□□□□ -0.43
TRA2B-202ENST00000342294 DCUN1D5Q9BTE7 237 aa12.34□□□□□ -0.43
TRA2B-202ENST00000342294 CGB1A6NKQ9 187 aa12.33□□□□□ -0.44
TRA2B-202ENST00000342294 C11orf94C9JXX5 98 aa12.33□□□□□ -0.44
TRA2B-202ENST00000342294 DEFB4AO15263 64 aa12.33□□□□□ -0.44
TRA2B-202ENST00000342294 ADMP35318 185 aa12.33□□□□□ -0.44
TRA2B-202ENST00000342294 RPL30P62888 115 aaKnown RBP12.33□□□□□ -0.44
TRA2B-202ENST00000342294 ARFRP1Q13795 201 aa12.33□□□□□ -0.44
TRA2B-202ENST00000342294 IRF3Q14653 427 aa12.33□□□□□ -0.44
TRA2B-202ENST00000342294 ZNF124Q15973 351 aa12.33□□□□□ -0.44
TRA2B-202ENST00000342294 PLET1Q6UQ28 207 aa12.33□□□□□ -0.44
TRA2B-202ENST00000342294 MS4A15Q8N5U1 240 aa12.33□□□□□ -0.44
TRA2B-202ENST00000342294 OR2A7Q96R45 310 aa12.33□□□□□ -0.44
TRA2B-202ENST00000342294 C6orf62Q9GZU0 229 aaPredicted RBP12.33□□□□□ -0.44
TRA2B-202ENST00000342294 SLC17A2O00624 439 aa12.32□□□□□ -0.44
TRA2B-202ENST00000342294 ZNF555Q8NEP9 628 aa12.32□□□□□ -0.44
TRA2B-202ENST00000342294 VSTM2AQ8TAG5 236 aa12.32□□□□□ -0.44
TRA2B-202ENST00000342294 HRH4Q9H3N8 390 aa12.32□□□□□ -0.44
TRA2B-202ENST00000342294 DAZ1Q9NQZ3 744 aaKnown RBP12.32□□□□□ -0.44
TRA2B-202ENST00000342294 ATP5HO75947 161 aa12.31□□□□□ -0.44
TRA2B-202ENST00000342294 REG1AP05451 166 aa12.31□□□□□ -0.44
TRA2B-202ENST00000342294 UCHL1P09936 223 aa12.31□□□□□ -0.44
TRA2B-202ENST00000342294 DEFA4P12838 97 aa12.31□□□□□ -0.44
TRA2B-202ENST00000342294 PTBP1P26599 531 aaKnown RBP eCLIP12.31□□□□□ -0.44
TRA2B-202ENST00000342294 PSMD7P51665 324 aa12.31□□□□□ -0.44
TRA2B-202ENST00000342294 BRWD1-AS2P59051 145 aa12.31□□□□□ -0.44
TRA2B-202ENST00000342294 HSD17B12Q53GQ0 312 aa12.31□□□□□ -0.44
TRA2B-202ENST00000342294 KCTD9Q7L273 389 aa12.31□□□□□ -0.44
TRA2B-202ENST00000342294 NANOGP1Q8N7R0 232 aa12.31□□□□□ -0.44
TRA2B-202ENST00000342294 OR56B1Q8NGI3 324 aa12.31□□□□□ -0.44
TRA2B-202ENST00000342294 MAFIPQ8WZ33 124 aa12.31□□□□□ -0.44
TRA2B-202ENST00000342294 GINS4Q9BRT9 223 aa12.31□□□□□ -0.44
TRA2B-202ENST00000342294 PRELID3BQ9Y3B1 194 aa12.31□□□□□ -0.44
TRA2B-202ENST00000342294 MYL12BO14950 172 aa12.3□□□□□ -0.44
TRA2B-202ENST00000342294 TGOLN2O43493 480 aa12.3□□□□□ -0.44
TRA2B-202ENST00000342294 CTSDP07339 412 aaPredicted RBP12.3□□□□□ -0.44
TRA2B-202ENST00000342294 RPA2P15927 270 aa12.3□□□□□ -0.44
TRA2B-202ENST00000342294 OR2B11Q5JQS5 317 aa12.3□□□□□ -0.44
TRA2B-202ENST00000342294 SSX9Q7RTT3 188 aa12.3□□□□□ -0.44
TRA2B-202ENST00000342294 ZNF645Q8N7E2 425 aa12.3□□□□□ -0.44
TRA2B-202ENST00000342294 OR4A5Q8NH83 315 aa12.3□□□□□ -0.44
TRA2B-202ENST00000342294 PLGRKTQ9HBL7 147 aa12.3□□□□□ -0.44
TRA2B-202ENST00000342294 SMPD3Q9NY59 655 aaPredicted RBP12.3□□□□□ -0.44
TRA2B-202ENST00000342294 MRPS7Q9Y2R9 242 aaKnown RBP12.3□□□□□ -0.44
TRA2B-202ENST00000342294 IGLV2-14P01704 120 aa12.29□□□□□ -0.44
TRA2B-202ENST00000342294 MRPS15P82914 257 aaKnown RBP12.29□□□□□ -0.44
TRA2B-202ENST00000342294 PLA2G7Q13093 441 aa12.29□□□□□ -0.44
TRA2B-202ENST00000342294 LAIR2Q6ISS4 152 aa12.29□□□□□ -0.44
TRA2B-202ENST00000342294 Q6ZS49 121 aa12.29□□□□□ -0.44
TRA2B-202ENST00000342294 Q8NAQ8 132 aa12.29□□□□□ -0.44
TRA2B-202ENST00000342294 RBMX2Q9Y388 322 aaKnown RBP12.29□□□□□ -0.44
TRA2B-202ENST00000342294 IGHV4-4A0A075B6R2 117 aa12.28□□□□□ -0.44
TRA2B-202ENST00000342294 IGKV1D-8A0A087WSZ0 117 aa12.28□□□□□ -0.44
TRA2B-202ENST00000342294 K7EMT4 169 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms