RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 ADGRL4Q9HBW9 690 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 MEPEQ9NQ76 525 aaPredicted RBP1.01□□□□□ -2.25
LINC00643-201ENST00000334389 FAM206AQ9NX38 181 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 ADA2Q9NZK5 511 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 VAPAQ9P0L0 249 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 KIAA1456Q9P272 454 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 SCP2D1Q9UJQ7 156 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 B9D1Q9UPM9 204 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 R4GMQ9 66 aa1.01□□□□□ -2.25
LINC00643-201ENST00000334389 IGHV3OR16-12A0A075B7B8 117 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 TMEM218A2RU14 115 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 TMEM212A6NML5 194 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 CD300LBA8K4G0 201 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 EFCAB9A8MZ26 197 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 KRBOX1C9JBD0 128 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 M0QXV9 152 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 SULT1C2O00338 296 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 CCL22O00626 93 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 NME4O00746 187 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 MRASO14807 208 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 CTDSPLO15194 276 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 CCL25O15444 150 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 NBR2O15453 112 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 IFNA5P01569 189 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 FABP3P05413 133 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 SLC25A6P12236 298 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 ALOX5APP20292 161 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 GRPRP30550 384 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 PRSS3P35030 304 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 CHI3L1P36222 383 aaPredicted RBP1□□□□□ -2.25
LINC00643-201ENST00000334389 GIPRP48546 466 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 PRKXP51817 358 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 PLA2G16P53816 162 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 RPL18Q07020 188 aaKnown RBP1□□□□□ -2.25
LINC00643-201ENST00000334389 IL15RAQ13261 267 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 DHRS2Q13268 280 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 CCNIQ14094 377 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 CDK5R1Q15078 307 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 OR8G1Q15617 311 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 CTF1Q16619 201 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 SMN1Q16637 294 aaKnown RBP1□□□□□ -2.25
LINC00643-201ENST00000334389 TMEM241Q24JQ0 296 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 C2orf76Q3KRA6 126 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 ALG10BQ5I7T1 473 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 TMEM244Q5VVB8 128 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 OR2T5Q6IEZ7 315 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 OR10K2Q6IF99 312 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 DPY19L4Q7Z388 723 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 AKAP14Q86UN6 197 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 CCDC28AQ8IWP9 274 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 ZNF679Q8IYX0 411 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 CD177Q8N6Q3 437 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 OR5M1Q8NGP8 315 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 OR2T29Q8NH02 315 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 OR52N5Q8NH56 324 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 OSR1Q8TAX0 266 aaPredicted RBP1□□□□□ -2.25
LINC00643-201ENST00000334389 GIPC3Q8TF64 312 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 MITD1Q8WV92 249 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 FAM162AQ96A26 154 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 CMBLQ96DG6 245 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 BPIFA2Q96DR5 249 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 CENPNQ96H22 339 aaPredicted RBP1□□□□□ -2.25
LINC00643-201ENST00000334389 ABHD14BQ96IU4 210 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 FAM118BQ9BPY3 351 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 WDR76Q9H967 626 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 RBFOX1Q9NWB1 397 aaKnown RBP1□□□□□ -2.25
LINC00643-201ENST00000334389 SCN3BQ9NY72 215 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 H2AFY2Q9P0M6 372 aaPredicted RBP1□□□□□ -2.25
LINC00643-201ENST00000334389 ZNF581Q9P0T4 197 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 RHCGQ9UBD6 479 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 RPS6KB2Q9UBS0 482 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 PSG11Q9UQ72 335 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 LHFPL6Q9Y693 200 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 A0A0D9SG52 128 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 C13orf42A0A1B0GVH6 325 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 DUXBA0A1W2PPF3 345 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 FAM230AA0A1W2PPH8 454 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 PGPEP1LA6NFU8 196 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 METTL15A6NJ78 407 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 ZNF98A6NK75 572 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 C1orf196B1AJZ1 125 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 FAM25AB3EWG3 89 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 FAM25CB3EWG5 89 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 FAM25GB3EWG6 89 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 C5orf58C9J3I9 102 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 H3BMQ9 156 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 SLC1A7O00341 560 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 FCN1O00602 326 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 SGCEO43556 437 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 UPK1BO75841 260 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 TUSC2O75896 110 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 DHRS3O75911 302 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 IGLV2-14P01704 120 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 HBZP02008 142 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 APOHP02749 345 aaPredicted RBP1□□□□□ -2.25
LINC00643-201ENST00000334389 SBK2P0C263 348 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 PSG2P11465 335 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 DTYMKP23919 212 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 POU1F1P28069 291 aa1□□□□□ -2.25
LINC00643-201ENST00000334389 FMO3P31513 532 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms