RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 NHSQ6T4R5 1651 aa12.72□□□□□ -0.37
SCN3B-201ENST00000299333 SCO2A0A1W2PP80 73 aa12.72□□□□□ -0.37
SCN3B-201ENST00000299333 A0A1W2PQM1 296 aa12.72□□□□□ -0.37
SCN3B-201ENST00000299333 CCL8P80075 99 aa12.72□□□□□ -0.37
SCN3B-201ENST00000299333 ZNF826PQ6ZT77 177 aa12.72□□□□□ -0.37
SCN3B-201ENST00000299333 KNTC1P50748 2209 aa12.71□□□□□ -0.37
SCN3B-201ENST00000299333 ZP4Q12836 540 aa12.71□□□□□ -0.37
SCN3B-201ENST00000299333 CYP2G1PQ6ZSU1 146 aa12.71□□□□□ -0.37
SCN3B-201ENST00000299333 A0A087WWC5 75 aa12.71□□□□□ -0.37
SCN3B-201ENST00000299333 MRPL32Q9BYC8 188 aaKnown RBP12.71□□□□□ -0.37
SCN3B-201ENST00000299333 PCM1Q15154 2024 aa12.71□□□□□ -0.38
SCN3B-201ENST00000299333 FOXI3A8MTJ6 420 aaPredicted RBP12.71□□□□□ -0.38
SCN3B-201ENST00000299333 SAMD5Q5TGI4 173 aa12.71□□□□□ -0.38
SCN3B-201ENST00000299333 SCGB3A1Q96QR1 104 aa12.71□□□□□ -0.38
SCN3B-201ENST00000299333 DNAJC13O75165 2243 aa12.71□□□□□ -0.38
SCN3B-201ENST00000299333 NXPH1P58417 271 aa12.71□□□□□ -0.38
SCN3B-201ENST00000299333 TBR1Q16650 682 aa12.71□□□□□ -0.38
SCN3B-201ENST00000299333 GCSAMQ8N6F7 178 aa12.71□□□□□ -0.38
SCN3B-201ENST00000299333 NAA38Q9BRA0 125 aaKnown RBP12.71□□□□□ -0.38
SCN3B-201ENST00000299333 DLL3Q9NYJ7 618 aa12.71□□□□□ -0.38
SCN3B-201ENST00000299333 TCF19Q9Y242 345 aa12.71□□□□□ -0.38
SCN3B-201ENST00000299333 A0A1W2PS18 150 aa12.7□□□□□ -0.38
SCN3B-201ENST00000299333 TNFRSF6BO95407 300 aa12.7□□□□□ -0.38
SCN3B-201ENST00000299333 CGAP01215 116 aa12.7□□□□□ -0.38
SCN3B-201ENST00000299333 PAPPA-AS1Q5QFB9 102 aa12.7□□□□□ -0.38
SCN3B-201ENST00000299333 TMEM92Q6UXU6 159 aa12.7□□□□□ -0.38
SCN3B-201ENST00000299333 RTN4RL2Q86UN3 420 aa12.7□□□□□ -0.38
SCN3B-201ENST00000299333 LINC00305Q7Z4B0 112 aa12.7□□□□□ -0.38
SCN3B-201ENST00000299333 NPIPB3Q92617 1050 aa12.7□□□□□ -0.38
SCN3B-201ENST00000299333 LEAP2Q969E1 77 aa12.7□□□□□ -0.38
SCN3B-201ENST00000299333 MGST2Q99735 147 aa12.7□□□□□ -0.38
SCN3B-201ENST00000299333 MS4A5Q9H3V2 200 aa12.7□□□□□ -0.38
SCN3B-201ENST00000299333 SDF2L1Q9HCN8 221 aa12.7□□□□□ -0.38
SCN3B-201ENST00000299333 SIPA1L3O60292 1781 aaPredicted RBP12.7□□□□□ -0.38
SCN3B-201ENST00000299333 ZFP36L2P47974 494 aaKnown RBP12.7□□□□□ -0.38
SCN3B-201ENST00000299333 SRSF3P84103 164 aaKnown RBP12.7□□□□□ -0.38
SCN3B-201ENST00000299333 FAM71F2Q6NXP2 309 aa12.7□□□□□ -0.38
SCN3B-201ENST00000299333 RPP25Q9BUL9 199 aaKnown RBP12.7□□□□□ -0.38
SCN3B-201ENST00000299333 C19orf24Q9BVV8 132 aa12.7□□□□□ -0.38
SCN3B-201ENST00000299333 NPCDR1Q9BY65 106 aa12.7□□□□□ -0.38
SCN3B-201ENST00000299333 ZNF71Q9NQZ8 489 aaPredicted RBP12.7□□□□□ -0.38
SCN3B-201ENST00000299333 YBX2Q9Y2T7 364 aaKnown RBP12.7□□□□□ -0.38
SCN3B-201ENST00000299333 IL6RP08887 468 aaPredicted RBP12.7□□□□□ -0.38
SCN3B-201ENST00000299333 PAX2Q02962 417 aa12.7□□□□□ -0.38
SCN3B-201ENST00000299333 FADS6Q8N9I5 356 aa12.7□□□□□ -0.38
SCN3B-201ENST00000299333 KNL1Q8NG31 2342 aa12.69□□□□□ -0.38
SCN3B-201ENST00000299333 TRAV24A0A0B4J272 114 aa12.69□□□□□ -0.38
SCN3B-201ENST00000299333 MOSP00540 346 aa12.69□□□□□ -0.38
SCN3B-201ENST00000299333 PSG1P11464 419 aa12.69□□□□□ -0.38
SCN3B-201ENST00000299333 ADMP35318 185 aa12.69□□□□□ -0.38
SCN3B-201ENST00000299333 ATP5G3P48201 142 aa12.69□□□□□ -0.38
SCN3B-201ENST00000299333 FOXC1Q12948 553 aa12.69□□□□□ -0.38
SCN3B-201ENST00000299333 ZNF721Q8TF20 911 aa12.69□□□□□ -0.38
SCN3B-201ENST00000299333 ORAOV1Q8WV07 137 aa12.69□□□□□ -0.38
SCN3B-201ENST00000299333 EVPLQ92817 2033 aa12.69□□□□□ -0.38
SCN3B-201ENST00000299333 PEAR1Q5VY43 1037 aaPredicted RBP12.69□□□□□ -0.38
SCN3B-201ENST00000299333 LAIR2Q6ISS4 152 aa12.69□□□□□ -0.38
SCN3B-201ENST00000299333 UNQ5815/PRO19632Q6UWF5 114 aa12.69□□□□□ -0.38
SCN3B-201ENST00000299333 FAM181BA6NEQ2 426 aa12.69□□□□□ -0.38
SCN3B-201ENST00000299333 ATP5LO75964 103 aa12.69□□□□□ -0.38
SCN3B-201ENST00000299333 UNQ9370/PRO34162Q6UXP9 181 aa12.69□□□□□ -0.38
SCN3B-201ENST00000299333 SPRED2Q7Z698 418 aa12.69□□□□□ -0.38
SCN3B-201ENST00000299333 hCG_38984A0A1B0GV85 526 aa12.69□□□□□ -0.38
SCN3B-201ENST00000299333 TNFSF14O43557 240 aa12.69□□□□□ -0.38
SCN3B-201ENST00000299333 UBE2V1Q13404 147 aa12.69□□□□□ -0.38
SCN3B-201ENST00000299333 ZNF479Q96JC4 524 aa12.69□□□□□ -0.38
SCN3B-201ENST00000299333 WNT9BO14905 357 aa12.68□□□□□ -0.38
SCN3B-201ENST00000299333 CXCL10P02778 98 aa12.68□□□□□ -0.38
SCN3B-201ENST00000299333 PF4V1P10720 104 aa12.68□□□□□ -0.38
SCN3B-201ENST00000299333 CLDND2Q8NHS1 167 aa12.68□□□□□ -0.38
SCN3B-201ENST00000299333 FAM90A10PA6NDY2 464 aa12.68□□□□□ -0.38
SCN3B-201ENST00000299333 FAM90A18PA6NE21 464 aa12.68□□□□□ -0.38
SCN3B-201ENST00000299333 FAM90A16PA6NEW6 464 aa12.68□□□□□ -0.38
SCN3B-201ENST00000299333 FAM90A20PA6NIJ5 464 aa12.68□□□□□ -0.38
SCN3B-201ENST00000299333 FAM90A8PA6NJQ4 464 aa12.68□□□□□ -0.38
SCN3B-201ENST00000299333 FAM90A7PA6NKC0 464 aa12.68□□□□□ -0.38
SCN3B-201ENST00000299333 FAM90A22PA8MWA6 464 aa12.68□□□□□ -0.38
SCN3B-201ENST00000299333 FAM90A12PA8MX19 464 aa12.68□□□□□ -0.38
SCN3B-201ENST00000299333 FAM90A5PA8MXJ8 464 aa12.68□□□□□ -0.38
SCN3B-201ENST00000299333 FAM90A23PA8MXZ1 464 aa12.68□□□□□ -0.38
SCN3B-201ENST00000299333 FAM90A15PP0C7V4 464 aa12.68□□□□□ -0.38
SCN3B-201ENST00000299333 FAM90A13PP0C7W8 464 aa12.68□□□□□ -0.38
SCN3B-201ENST00000299333 FAM90A14PP0C7W9 464 aa12.68□□□□□ -0.38
SCN3B-201ENST00000299333 FAM90A24PP0C7X0 464 aa12.68□□□□□ -0.38
SCN3B-201ENST00000299333 UCP2P55851 309 aa12.68□□□□□ -0.38
SCN3B-201ENST00000299333 RNASEH2CQ8TDP1 164 aaKnown RBP12.68□□□□□ -0.38
SCN3B-201ENST00000299333 Q96M66 194 aa12.68□□□□□ -0.38
SCN3B-201ENST00000299333 CALYQ9NYX4 217 aa12.68□□□□□ -0.38
SCN3B-201ENST00000299333 IGLV1-36A0A0B4J1U3 117 aa12.68□□□□□ -0.38
SCN3B-201ENST00000299333 UBE2CO00762 179 aa12.68□□□□□ -0.38
SCN3B-201ENST00000299333 TAF1P21675 1872 aa12.68□□□□□ -0.38
SCN3B-201ENST00000299333 ATP5IP56385 69 aaPredicted RBP12.68□□□□□ -0.38
SCN3B-201ENST00000299333 ZFC3H1O60293 1989 aaKnown RBP12.68□□□□□ -0.38
SCN3B-201ENST00000299333 A0A0J9YW62 118 aa12.68□□□□□ -0.38
SCN3B-201ENST00000299333 GPX4P36969 197 aaPredicted RBP12.68□□□□□ -0.38
SCN3B-201ENST00000299333 PLAURQ03405 335 aa12.68□□□□□ -0.38
SCN3B-201ENST00000299333 TFF3Q07654 80 aa12.68□□□□□ -0.38
SCN3B-201ENST00000299333 ZNF658BQ4V348 819 aaPredicted RBP12.68□□□□□ -0.38
SCN3B-201ENST00000299333 TMEM170AQ8WVE7 144 aa12.68□□□□□ -0.38
SCN3B-201ENST00000299333 ECM29Q5VYK3 1845 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms