RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 OR5B12Q96R08 314 aa11.24□□□□□ -0.61
BCCIP-202ENST00000299130 PFDN5Q99471 154 aa11.24□□□□□ -0.61
BCCIP-202ENST00000299130 TMEM140Q9NV12 185 aa11.24□□□□□ -0.61
BCCIP-202ENST00000299130 PITPNC1Q9UKF7 332 aa11.24□□□□□ -0.61
BCCIP-202ENST00000299130 CACNA1GO43497 2377 aa11.24□□□□□ -0.61
BCCIP-202ENST00000299130 AHRRA9YTQ3 701 aa11.24□□□□□ -0.61
BCCIP-202ENST00000299130 F2RL2O00254 374 aa11.24□□□□□ -0.61
BCCIP-202ENST00000299130 NDUFB4O95168 129 aa11.24□□□□□ -0.61
BCCIP-202ENST00000299130 BTF3P20290 206 aaKnown RBP11.24□□□□□ -0.61
BCCIP-202ENST00000299130 C17orf58Q2M2W7 97 aa11.24□□□□□ -0.61
BCCIP-202ENST00000299130 ZNF474Q6S9Z5 364 aaPredicted RBP11.24□□□□□ -0.61
BCCIP-202ENST00000299130 ITLN1Q8WWA0 313 aa11.24□□□□□ -0.61
BCCIP-202ENST00000299130 DDB2Q92466 427 aa11.24□□□□□ -0.61
BCCIP-202ENST00000299130 PARD6AQ9NPB6 346 aa11.24□□□□□ -0.61
BCCIP-202ENST00000299130 CALYQ9NYX4 217 aa11.24□□□□□ -0.61
BCCIP-202ENST00000299130 CADP27708 2225 aa11.23□□□□□ -0.61
BCCIP-202ENST00000299130 PPP5D1E7EU14 171 aa11.23□□□□□ -0.61
BCCIP-202ENST00000299130 SOX15O60248 233 aa11.23□□□□□ -0.61
BCCIP-202ENST00000299130 CGB3P0DN86 165 aa11.23□□□□□ -0.61
BCCIP-202ENST00000299130 CGB7P0DN87 165 aa11.23□□□□□ -0.61
BCCIP-202ENST00000299130 CT45A1Q5HYN5 189 aa11.23□□□□□ -0.61
BCCIP-202ENST00000299130 LINC01551Q86U37 167 aa11.23□□□□□ -0.61
BCCIP-202ENST00000299130 TMEM183AQ8IXX5 376 aa11.23□□□□□ -0.61
BCCIP-202ENST00000299130 CT45A3Q8NHU0 189 aa11.23□□□□□ -0.61
BCCIP-202ENST00000299130 SSMEM1Q8WWF3 244 aa11.23□□□□□ -0.61
BCCIP-202ENST00000299130 RHOVQ96L33 236 aa11.23□□□□□ -0.61
BCCIP-202ENST00000299130 S1PR3Q99500 378 aa11.23□□□□□ -0.61
BCCIP-202ENST00000299130 GGTLC1Q9BX51 225 aa11.23□□□□□ -0.61
BCCIP-202ENST00000299130 BOD1L1Q8NFC6 3051 aa11.23□□□□□ -0.61
BCCIP-202ENST00000299130 DSCAMO60469 2012 aa11.23□□□□□ -0.61
BCCIP-202ENST00000299130 A0A1W2PPV4 95 aa11.23□□□□□ -0.61
BCCIP-202ENST00000299130 AMBPP02760 352 aa11.23□□□□□ -0.61
BCCIP-202ENST00000299130 C1QTNF9P0C862 333 aa11.23□□□□□ -0.61
BCCIP-202ENST00000299130 ARL14EPLP0DKL9 152 aa11.23□□□□□ -0.61
BCCIP-202ENST00000299130 TGIF2LYQ8IUE0 185 aa11.23□□□□□ -0.61
BCCIP-202ENST00000299130 OR1P1Q8NH06 330 aa11.23□□□□□ -0.61
BCCIP-202ENST00000299130 TMEM37Q8WXS4 190 aa11.23□□□□□ -0.61
BCCIP-202ENST00000299130 ANAPC16Q96DE5 110 aa11.23□□□□□ -0.61
BCCIP-202ENST00000299130 FUT9Q9Y231 359 aa11.23□□□□□ -0.61
BCCIP-202ENST00000299130 TCF19Q9Y242 345 aa11.23□□□□□ -0.61
BCCIP-202ENST00000299130 PXMP4Q9Y6I8 212 aa11.23□□□□□ -0.61
BCCIP-202ENST00000299130 TRBV20OR9-2A0A075B6H5 130 aa11.22□□□□□ -0.61
BCCIP-202ENST00000299130 XKRY2A2RUG3 117 aa11.22□□□□□ -0.61
BCCIP-202ENST00000299130 GGCTO75223 188 aaKnown RBP11.22□□□□□ -0.61
BCCIP-202ENST00000299130 LHBP01229 141 aa11.22□□□□□ -0.61
BCCIP-202ENST00000299130 OPRK1P41145 380 aa11.22□□□□□ -0.61
BCCIP-202ENST00000299130 ERVK-16P61578 105 aa11.22□□□□□ -0.61
BCCIP-202ENST00000299130 UNQ6494/PRO21346Q6UXR6 183 aa11.22□□□□□ -0.61
BCCIP-202ENST00000299130 C22orf34Q6ZV56 151 aa11.22□□□□□ -0.61
BCCIP-202ENST00000299130 OR2T10Q8NGZ9 312 aa11.22□□□□□ -0.61
BCCIP-202ENST00000299130 PRO1933Q9H354 126 aa11.22□□□□□ -0.61
BCCIP-202ENST00000299130 SAA2-SAA4A0A096LPE2 208 aa11.21□□□□□ -0.61
BCCIP-202ENST00000299130 MBD3L4A6NDZ8 208 aaPredicted RBP11.21□□□□□ -0.61
BCCIP-202ENST00000299130 MBD3L3A6NE82 208 aaPredicted RBP11.21□□□□□ -0.61
BCCIP-202ENST00000299130 MBD3L5A6NJ08 208 aaPredicted RBP11.21□□□□□ -0.61
BCCIP-202ENST00000299130 FAM90A9PA6NNJ1 464 aa11.21□□□□□ -0.61
BCCIP-202ENST00000299130 SAA2P0DJI9 122 aaPredicted RBP11.21□□□□□ -0.61
BCCIP-202ENST00000299130 CFHR2P36980 270 aa11.21□□□□□ -0.61
BCCIP-202ENST00000299130 MZT1Q08AG7 82 aa11.21□□□□□ -0.61
BCCIP-202ENST00000299130 ARSJQ5FYB0 599 aaPredicted RBP11.21□□□□□ -0.61
BCCIP-202ENST00000299130 FAM78BQ5VT40 261 aa11.21□□□□□ -0.61
BCCIP-202ENST00000299130 SPATA31B1PQ5VZV4 182 aa11.21□□□□□ -0.61
BCCIP-202ENST00000299130 OR52E5Q8NH55 327 aa11.21□□□□□ -0.61
BCCIP-202ENST00000299130 MBD3L2Q8NHZ7 208 aaPredicted RBP11.21□□□□□ -0.61
BCCIP-202ENST00000299130 RAB1CQ92928 201 aa11.21□□□□□ -0.61
BCCIP-202ENST00000299130 RBFOX2O43251 390 aaKnown RBP eCLIP11.21□□□□□ -0.62
BCCIP-202ENST00000299130 VENTXO95231 258 aa11.21□□□□□ -0.62
BCCIP-202ENST00000299130 PDLIM3Q53GG5 364 aaPredicted RBP11.21□□□□□ -0.62
BCCIP-202ENST00000299130 ACTL10Q5JWF8 245 aa11.21□□□□□ -0.62
BCCIP-202ENST00000299130 TCF23Q7RTU1 214 aa11.21□□□□□ -0.62
BCCIP-202ENST00000299130 ZNRD1Q9P1U0 126 aa11.21□□□□□ -0.62
BCCIP-202ENST00000299130 FAM215AQ9Y5M1 114 aa11.21□□□□□ -0.62
BCCIP-202ENST00000299130 MMP23AO75900 390 aa11.2□□□□□ -0.62
BCCIP-202ENST00000299130 HNF1AP20823 631 aa11.2□□□□□ -0.62
BCCIP-202ENST00000299130 GPX4P36969 197 aaPredicted RBP11.2□□□□□ -0.62
BCCIP-202ENST00000299130 NUBP1P53384 320 aa11.2□□□□□ -0.62
BCCIP-202ENST00000299130 KLF3P57682 345 aaPredicted RBP11.2□□□□□ -0.62
BCCIP-202ENST00000299130 DEFB108BQ8NET1 73 aa11.2□□□□□ -0.62
BCCIP-202ENST00000299130 PPP1R35Q8TAP8 253 aa11.2□□□□□ -0.62
BCCIP-202ENST00000299130 SNRNP40Q96DI7 357 aaKnown RBP11.2□□□□□ -0.62
BCCIP-202ENST00000299130 FAM122AQ96E09 287 aa11.2□□□□□ -0.62
BCCIP-202ENST00000299130 KCNIP2Q9NS61 270 aa11.2□□□□□ -0.62
BCCIP-202ENST00000299130 SCO2A0A1W2PP80 73 aa11.2□□□□□ -0.62
BCCIP-202ENST00000299130 PDE6DO43924 150 aa11.2□□□□□ -0.62
BCCIP-202ENST00000299130 NDUFS6O75380 124 aaKnown RBP11.2□□□□□ -0.62
BCCIP-202ENST00000299130 FOXH1O75593 365 aa11.2□□□□□ -0.62
BCCIP-202ENST00000299130 STAG3L2P0CL84 134 aa11.2□□□□□ -0.62
BCCIP-202ENST00000299130 STAG3L3P0CL85 134 aa11.2□□□□□ -0.62
BCCIP-202ENST00000299130 TMPRSS3P57727 454 aa11.2□□□□□ -0.62
BCCIP-202ENST00000299130 RPP30P78346 268 aaKnown RBP11.2□□□□□ -0.62
BCCIP-202ENST00000299130 OR4A47Q6IF82 309 aa11.2□□□□□ -0.62
BCCIP-202ENST00000299130 FAM169BQ8N8A8 192 aa11.2□□□□□ -0.62
BCCIP-202ENST00000299130 SEPSECSQ9HD40 501 aaKnown RBP11.2□□□□□ -0.62
BCCIP-202ENST00000299130 YTHDF2Q9Y5A9 579 aaKnown RBP11.2□□□□□ -0.62
BCCIP-202ENST00000299130 RAI1Q7Z5J4 1906 aaPredicted RBP11.2□□□□□ -0.62
BCCIP-202ENST00000299130 C15orf61A6NNL5 157 aa11.19□□□□□ -0.62
BCCIP-202ENST00000299130 MPDU1O75352 247 aa11.19□□□□□ -0.62
BCCIP-202ENST00000299130 IL6RP08887 468 aaPredicted RBP11.19□□□□□ -0.62
BCCIP-202ENST00000299130 IL3RAP26951 378 aa11.19□□□□□ -0.62
BCCIP-202ENST00000299130 SRP14P37108 136 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms