RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 SPEM2Q0P670 501 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 PUSL1Q8N0Z8 303 aaKnown RBP6.87□□□□□ -1.31
LIMD1-201ENST00000273317 FAM181AQ8N9Y4 354 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 ZPLD1Q8TCW7 415 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 C5orf66Q9H5L9 145 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 IDI2-AS1Q9NZ38 188 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 YBX2Q9Y2T7 364 aaKnown RBP6.87□□□□□ -1.31
LIMD1-201ENST00000273317 A0A087WWC5 75 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 F12P00748 615 aaPredicted RBP6.87□□□□□ -1.31
LIMD1-201ENST00000273317 NHLRC3Q5JS37 347 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 SAPCD1Q5SSQ6 148 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 C1QTNF12Q5T7M4 302 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 C16orf47Q6ZP98 133 aaPredicted RBP6.87□□□□□ -1.31
LIMD1-201ENST00000273317 HDHD3Q9BSH5 251 aaPredicted RBP6.87□□□□□ -1.31
LIMD1-201ENST00000273317 EIF3GO75821 320 aaKnown RBP eCLIP6.87□□□□□ -1.31
LIMD1-201ENST00000273317 OR52M1Q8NGK5 317 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 OR4D5Q8NGN0 318 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 HIST1H2BAQ96A08 127 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 MYO18BQ8IUG5 2567 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 PRF1P14222 555 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 SLC25A47Q6Q0C1 308 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 EAF1Q96JC9 268 aaPredicted RBP6.86□□□□□ -1.31
LIMD1-201ENST00000273317 ATP5LO75964 103 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 DDB2Q92466 427 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 NEUROG1Q92886 237 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 CALYQ9NYX4 217 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 JPT1Q9UK76 154 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 NPIPB9F8W1W9 429 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 NTN1O95631 604 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 SNRPCP09234 159 aaKnown RBP6.86□□□□□ -1.31
LIMD1-201ENST00000273317 LINC00518Q8N0U6 118 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 WNT2BQ93097 391 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 FMC1Q96HJ9 113 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 CARHSP1Q9Y2V2 147 aaKnown RBP6.86□□□□□ -1.31
LIMD1-201ENST00000273317 CREBBPQ92793 2442 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 KCNK17Q96T54 332 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 LPAR2Q9HBW0 351 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 HIST1H1AQ02539 215 aaPredicted RBP6.86□□□□□ -1.31
LIMD1-201ENST00000273317 TMEM171Q8WVE6 324 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 PRSS27Q9BQR3 290 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 C5orf67F2Z3F1 127 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 MGAT2Q10469 447 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 ZNF600Q6ZNG1 722 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 C10orf111Q8N326 155 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 ST6GALNAC6Q969X2 333 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 AHRRA9YTQ3 701 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 ERVH48-1M5A8F1 160 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 GCM2O75603 506 aaPredicted RBP6.86□□□□□ -1.31
LIMD1-201ENST00000273317 UCP2P55851 309 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 HSPE1P61604 102 aaKnown RBP6.86□□□□□ -1.31
LIMD1-201ENST00000273317 RNFT1Q5M7Z0 435 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 ZNF729A6NN14 1252 aaPredicted RBP6.86□□□□□ -1.31
LIMD1-201ENST00000273317 OR11H12B2RN74 326 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 ZFP36L2P47974 494 aaKnown RBP6.86□□□□□ -1.31
LIMD1-201ENST00000273317 CLEC2AQ6UVW9 174 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 OR11H1Q8NG94 326 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 OR11H2Q8NH07 326 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 SLC25A38Q96DW6 304 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 IGKV3-7A0A075B6H7 116 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 IGKV3OR2-268A0A0C4DH90 116 aa6.86□□□□□ -1.31
LIMD1-201ENST00000273317 PEBP1P30086 187 aaKnown RBP6.85□□□□□ -1.31
LIMD1-201ENST00000273317 EEF1AKMT3Q96AZ1 226 aa6.85□□□□□ -1.31
LIMD1-201ENST00000273317 CLEC7AQ9BXN2 247 aa6.85□□□□□ -1.31
LIMD1-201ENST00000273317 GCHFRP30047 84 aa6.85□□□□□ -1.31
LIMD1-201ENST00000273317 GPR6P46095 362 aaPredicted RBP6.85□□□□□ -1.31
LIMD1-201ENST00000273317 ROS1P08922 2347 aa6.85□□□□□ -1.31
LIMD1-201ENST00000273317 RND3P61587 244 aa6.85□□□□□ -1.31
LIMD1-201ENST00000273317 TMEM186Q96B77 213 aa6.85□□□□□ -1.31
LIMD1-201ENST00000273317 SLC25A17O43808 307 aa6.85□□□□□ -1.31
LIMD1-201ENST00000273317 ADRA2AP08913 450 aa6.85□□□□□ -1.31
LIMD1-201ENST00000273317 TMEM187Q14656 261 aa6.85□□□□□ -1.31
LIMD1-201ENST00000273317 TMEM95Q3KNT9 176 aa6.85□□□□□ -1.31
LIMD1-201ENST00000273317 IGHV1-45A0A0A0MS14 117 aa6.85□□□□□ -1.31
LIMD1-201ENST00000273317 NPIPB11E5RHQ5 1161 aa6.85□□□□□ -1.31
LIMD1-201ENST00000273317 IGKV1D-16P01601 117 aa6.85□□□□□ -1.31
LIMD1-201ENST00000273317 PSG4Q00888 419 aa6.85□□□□□ -1.31
LIMD1-201ENST00000273317 C9orf50Q5SZB4 431 aa6.85□□□□□ -1.31
LIMD1-201ENST00000273317 ZAR1Q86SH2 424 aa6.85□□□□□ -1.31
LIMD1-201ENST00000273317 GDF9O60383 454 aa6.85□□□□□ -1.31
LIMD1-201ENST00000273317 UPK3AO75631 287 aa6.85□□□□□ -1.31
LIMD1-201ENST00000273317 GPX1P07203 203 aa6.85□□□□□ -1.31
LIMD1-201ENST00000273317 GPX4P36969 197 aaPredicted RBP6.85□□□□□ -1.31
LIMD1-201ENST00000273317 BEND2Q8NDZ0 799 aa6.85□□□□□ -1.31
LIMD1-201ENST00000273317 IGLV1-36A0A0B4J1U3 117 aa6.85□□□□□ -1.31
LIMD1-201ENST00000273317 CENPWQ5EE01 88 aa6.85□□□□□ -1.31
LIMD1-201ENST00000273317 JKAMPQ9P055 326 aa6.85□□□□□ -1.31
LIMD1-201ENST00000273317 PCSK4Q6UW60 755 aa6.85□□□□□ -1.31
LIMD1-201ENST00000273317 FAM214BQ7L5A3 538 aa6.85□□□□□ -1.31
LIMD1-201ENST00000273317 MBD3L1Q8WWY6 194 aa6.85□□□□□ -1.31
LIMD1-201ENST00000273317 LHFPL6Q9Y693 200 aa6.85□□□□□ -1.31
LIMD1-201ENST00000273317 hCG_38984A0A1B0GV85 526 aa6.84□□□□□ -1.31
LIMD1-201ENST00000273317 TSPAN2O60636 221 aa6.84□□□□□ -1.31
LIMD1-201ENST00000273317 CTSSP25774 331 aa6.84□□□□□ -1.31
LIMD1-201ENST00000273317 RND2P52198 227 aa6.84□□□□□ -1.31
LIMD1-201ENST00000273317 C2orf68Q2NKX9 166 aa6.84□□□□□ -1.31
LIMD1-201ENST00000273317 WNT5BQ9H1J7 359 aa6.84□□□□□ -1.31
LIMD1-201ENST00000273317 IGKV3D-11A0A0A0MRZ8 115 aa6.84□□□□□ -1.31
LIMD1-201ENST00000273317 IGKV3-11P04433 115 aa6.84□□□□□ -1.31
LIMD1-201ENST00000273317 REG1BP48304 166 aa6.84□□□□□ -1.31
LIMD1-201ENST00000273317 OR9G1Q8NH87 305 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms