RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 C10orf113Q5VZT2 155 aa9.81□□□□□ -0.84
VPS33A-201ENST00000267199 C18orf12Q96KH6 178 aa9.81□□□□□ -0.84
VPS33A-201ENST00000267199 SAP30LQ9HAJ7 183 aa9.81□□□□□ -0.84
VPS33A-201ENST00000267199 LEPROTL1O95214 131 aa9.81□□□□□ -0.84
VPS33A-201ENST00000267199 CELA3AP09093 270 aa9.81□□□□□ -0.84
VPS33A-201ENST00000267199 UCP2P55851 309 aa9.81□□□□□ -0.84
VPS33A-201ENST00000267199 DENND4CQ5VZ89 1909 aa9.81□□□□□ -0.84
VPS33A-201ENST00000267199 KLK10O43240 276 aa9.81□□□□□ -0.84
VPS33A-201ENST00000267199 CLDN14O95500 239 aa9.81□□□□□ -0.84
VPS33A-201ENST00000267199 LCN2P80188 198 aa9.81□□□□□ -0.84
VPS33A-201ENST00000267199 C19orf35Q6ZS72 473 aa9.81□□□□□ -0.84
VPS33A-201ENST00000267199 TGIF2LYQ8IUE0 185 aa9.81□□□□□ -0.84
VPS33A-201ENST00000267199 OR4F17Q8NGA8 305 aa9.81□□□□□ -0.84
VPS33A-201ENST00000267199 HARBI1Q96MB7 349 aa9.81□□□□□ -0.84
VPS33A-201ENST00000267199 OR8B2Q96RD0 313 aa9.81□□□□□ -0.84
VPS33A-201ENST00000267199 NPCDR1Q9BY65 106 aa9.81□□□□□ -0.84
VPS33A-201ENST00000267199 AAMDCQ9H7C9 122 aa9.81□□□□□ -0.84
VPS33A-201ENST00000267199 SCO2A0A1W2PP80 73 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 ODAMA1E959 279 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 CORTO00230 105 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 OR4A8P0C604 315 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 CCL1P22362 96 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 TMEM170AQ8WVE7 144 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 CCL17Q92583 94 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 LEAP2Q969E1 77 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 LSM10Q969L4 123 aaKnown RBP9.8□□□□□ -0.84
VPS33A-201ENST00000267199 RBM14Q96PK6 669 aaKnown RBP9.8□□□□□ -0.84
VPS33A-201ENST00000267199 INTS1Q8N201 2190 aaKnown RBP9.8□□□□□ -0.84
VPS33A-201ENST00000267199 HEATR1Q9H583 2144 aaKnown RBP9.8□□□□□ -0.84
VPS33A-201ENST00000267199 FRMPD3Q5JV73 1810 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 CADP27708 2225 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 C5orf63A6NC05 138 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 NAPSAO96009 420 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 UMODP07911 640 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 CENPWQ5EE01 88 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 C17orf82Q86X59 251 aaPredicted RBP9.8□□□□□ -0.84
VPS33A-201ENST00000267199 PAXXQ9BUH6 204 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 PLCE1Q9P212 2302 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 TMEM210A6NLX4 147 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 H3BTX0 84 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 TMPRSS2O15393 492 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 SNAI2O43623 268 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 NDUFB3O43676 98 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 MPDU1O75352 247 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 VENTXO95231 258 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 SAXO1Q8IYX7 474 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 ZNF645Q8N7E2 425 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 THADAQ6YHU6 1953 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 A6NDN8 102 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 FAM90A26D6RGX4 464 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 SSTR5P35346 364 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 KIR2DS2P43631 304 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 TNXAQ16473 311 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 C5orf17Q8NAS9 161 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 PKIBQ9C010 78 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 OR51B2Q9Y5P1 312 aa9.8□□□□□ -0.84
VPS33A-201ENST00000267199 hADV38S2A0JD32 116 aa9.79□□□□□ -0.84
VPS33A-201ENST00000267199 LINC00869P0C866 280 aa9.79□□□□□ -0.84
VPS33A-201ENST00000267199 SLC25A34Q6PIV7 304 aa9.79□□□□□ -0.84
VPS33A-201ENST00000267199 BHLHA15Q7RTS1 189 aaPredicted RBP9.79□□□□□ -0.84
VPS33A-201ENST00000267199 C1QL4Q86Z23 238 aa9.79□□□□□ -0.84
VPS33A-201ENST00000267199 TXNDC17Q9BRA2 123 aa9.79□□□□□ -0.84
VPS33A-201ENST00000267199 CREBBPQ92793 2442 aa9.79□□□□□ -0.84
VPS33A-201ENST00000267199 CA2P00918 260 aa9.79□□□□□ -0.84
VPS33A-201ENST00000267199 SCGB1C2P0DMR2 95 aa9.79□□□□□ -0.84
VPS33A-201ENST00000267199 COX5BP10606 129 aa9.79□□□□□ -0.84
VPS33A-201ENST00000267199 PRDX2P32119 198 aa9.79□□□□□ -0.84
VPS33A-201ENST00000267199 NUTF2P61970 127 aaKnown RBP9.79□□□□□ -0.84
VPS33A-201ENST00000267199 FAM214BQ7L5A3 538 aa9.79□□□□□ -0.84
VPS33A-201ENST00000267199 MIEN1Q9BRT3 115 aa9.79□□□□□ -0.84
VPS33A-201ENST00000267199 TMEM106BQ9NUM4 274 aa9.79□□□□□ -0.84
VPS33A-201ENST00000267199 NOTCH3Q9UM47 2321 aa9.79□□□□□ -0.84
VPS33A-201ENST00000267199 IGLV3-32A0A0A0MS00 114 aa9.79□□□□□ -0.84
VPS33A-201ENST00000267199 A0A1W2PN81 502 aa9.79□□□□□ -0.84
VPS33A-201ENST00000267199 ZNF207O43670 478 aaKnown RBP9.79□□□□□ -0.84
VPS33A-201ENST00000267199 CRYABP02511 175 aaKnown RBP9.79□□□□□ -0.84
VPS33A-201ENST00000267199 KRTCAP3Q53RY4 240 aa9.79□□□□□ -0.84
VPS33A-201ENST00000267199 LRRC10Q5BKY1 277 aa9.79□□□□□ -0.84
VPS33A-201ENST00000267199 ZNF664Q8N3J9 261 aa9.79□□□□□ -0.84
VPS33A-201ENST00000267199 TMEM171Q8WVE6 324 aa9.79□□□□□ -0.84
VPS33A-201ENST00000267199 SIGLEC12Q96PQ1 595 aa9.79□□□□□ -0.84
VPS33A-201ENST00000267199 ZNF581Q9P0T4 197 aa9.79□□□□□ -0.84
VPS33A-201ENST00000267199 HSPB8Q9UJY1 196 aa9.79□□□□□ -0.84
VPS33A-201ENST00000267199 PRNDQ9UKY0 176 aa9.79□□□□□ -0.84
VPS33A-201ENST00000267199 DOCK10Q96BY6 2186 aa9.79□□□□□ -0.84
VPS33A-201ENST00000267199 LRRK1Q38SD2 2015 aa9.79□□□□□ -0.84
VPS33A-201ENST00000267199 GCHFRP30047 84 aa9.78□□□□□ -0.84
VPS33A-201ENST00000267199 ID3Q02535 119 aa9.78□□□□□ -0.84
VPS33A-201ENST00000267199 HGFACQ04756 655 aa9.78□□□□□ -0.84
VPS33A-201ENST00000267199 CSRP2Q16527 193 aa9.78□□□□□ -0.84
VPS33A-201ENST00000267199 OR4D5Q8NGN0 318 aa9.78□□□□□ -0.84
VPS33A-201ENST00000267199 SPSB4Q96A44 273 aa9.78□□□□□ -0.84
VPS33A-201ENST00000267199 ADTRPQ96IZ2 230 aa9.78□□□□□ -0.84
VPS33A-201ENST00000267199 PRDM6Q9NQX0 595 aa9.78□□□□□ -0.84
VPS33A-201ENST00000267199 WISP1O95388 367 aa9.78□□□□□ -0.84
VPS33A-201ENST00000267199 CTSSP25774 331 aa9.78□□□□□ -0.84
VPS33A-201ENST00000267199 MAS1LP35410 378 aa9.78□□□□□ -0.84
VPS33A-201ENST00000267199 C12orf54Q6X4T0 127 aa9.78□□□□□ -0.84
VPS33A-201ENST00000267199 GTF3AQ92664 365 aaKnown RBP9.78□□□□□ -0.84
VPS33A-201ENST00000267199 ZNF524Q96C55 264 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms