RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 PROB1E7EW31 1015 aa13.02□□□□□ -0.33
TIMP3-201ENST00000266085 TM4SF5O14894 197 aa13.02□□□□□ -0.33
TIMP3-201ENST00000266085 HIST1H1BP16401 226 aaKnown RBP13.02□□□□□ -0.33
TIMP3-201ENST00000266085 GUCA2BQ16661 112 aa13.02□□□□□ -0.33
TIMP3-201ENST00000266085 FUT9Q9Y231 359 aa13.02□□□□□ -0.33
TIMP3-201ENST00000266085 ANAPC1Q9H1A4 1944 aa13.02□□□□□ -0.33
TIMP3-201ENST00000266085 SNURFLB1AK76 121 aa13.01□□□□□ -0.33
TIMP3-201ENST00000266085 IFITM2Q01629 132 aa13.01□□□□□ -0.33
TIMP3-201ENST00000266085 HIST3H3Q16695 136 aa13.01□□□□□ -0.33
TIMP3-201ENST00000266085 E9PLN8 166 aa13.01□□□□□ -0.33
TIMP3-201ENST00000266085 ZNF735P0CB33 412 aa13.01□□□□□ -0.33
TIMP3-201ENST00000266085 ATP5IP56385 69 aaPredicted RBP13.01□□□□□ -0.33
TIMP3-201ENST00000266085 OR2D3Q8NGH3 330 aa13.01□□□□□ -0.33
TIMP3-201ENST00000266085 VKORC1Q9BQB6 163 aa13.01□□□□□ -0.33
TIMP3-201ENST00000266085 PARD6AQ9NPB6 346 aa13.01□□□□□ -0.33
TIMP3-201ENST00000266085 ZNF146Q15072 292 aa13.01□□□□□ -0.33
TIMP3-201ENST00000266085 FAM90A1Q86YD7 464 aa13.01□□□□□ -0.33
TIMP3-201ENST00000266085 DNAJC4Q9NNZ3 241 aa13.01□□□□□ -0.33
TIMP3-201ENST00000266085 CLDN16Q9Y5I7 305 aa13.01□□□□□ -0.33
TIMP3-201ENST00000266085 ERVH48-1M5A8F1 160 aa13.01□□□□□ -0.33
TIMP3-201ENST00000266085 IER3P46695 156 aa13.01□□□□□ -0.33
TIMP3-201ENST00000266085 MFAP4P55083 255 aa13.01□□□□□ -0.33
TIMP3-201ENST00000266085 ZP1P60852 638 aa13.01□□□□□ -0.33
TIMP3-201ENST00000266085 RND3P61587 244 aa13.01□□□□□ -0.33
TIMP3-201ENST00000266085 HLA-DRB5Q30154 266 aa13.01□□□□□ -0.33
TIMP3-201ENST00000266085 DHRS11Q6UWP2 260 aa13.01□□□□□ -0.33
TIMP3-201ENST00000266085 WFDC3Q8IUB2 231 aa13.01□□□□□ -0.33
TIMP3-201ENST00000266085 PPOXP50336 477 aa13□□□□□ -0.33
TIMP3-201ENST00000266085 TBR1Q16650 682 aa13□□□□□ -0.33
TIMP3-201ENST00000266085 NCMAPQ5T1S8 102 aa13□□□□□ -0.33
TIMP3-201ENST00000266085 OSR1Q8TAX0 266 aaPredicted RBP13□□□□□ -0.33
TIMP3-201ENST00000266085 DYNLRB2Q8TF09 96 aa13□□□□□ -0.33
TIMP3-201ENST00000266085 CCL19Q99731 98 aa13□□□□□ -0.33
TIMP3-201ENST00000266085 KBTBD11-OT1A0A1B0GTJ5 212 aa13□□□□□ -0.33
TIMP3-201ENST00000266085 PTTG1IPP53801 180 aa13□□□□□ -0.33
TIMP3-201ENST00000266085 NHLRC3Q5JS37 347 aa13□□□□□ -0.33
TIMP3-201ENST00000266085 MRPL37Q9BZE1 423 aaKnown RBP13□□□□□ -0.33
TIMP3-201ENST00000266085 IGHV3OR16-10A0A075B7F0 116 aa13□□□□□ -0.33
TIMP3-201ENST00000266085 ELOA3CA0A087WX78 387 aaPredicted RBP13□□□□□ -0.33
TIMP3-201ENST00000266085 TMSB15BA0A087X1C1 80 aa13□□□□□ -0.33
TIMP3-201ENST00000266085 SLC35B1P78383 322 aa13□□□□□ -0.33
TIMP3-201ENST00000266085 C19orf35Q6ZS72 473 aa13□□□□□ -0.33
TIMP3-201ENST00000266085 PUSL1Q8N0Z8 303 aaKnown RBP13□□□□□ -0.33
TIMP3-201ENST00000266085 MDS2Q8NDY4 140 aa13□□□□□ -0.33
TIMP3-201ENST00000266085 MFSD2BA6NFX1 497 aa13□□□□□ -0.33
TIMP3-201ENST00000266085 ISLRO14498 428 aa13□□□□□ -0.33
TIMP3-201ENST00000266085 DANCRP0C864 163 aa13□□□□□ -0.33
TIMP3-201ENST00000266085 C8orf88P0DMB2 117 aa13□□□□□ -0.33
TIMP3-201ENST00000266085 HTN1P15515 57 aa13□□□□□ -0.33
TIMP3-201ENST00000266085 CRYGSP22914 178 aa13□□□□□ -0.33
TIMP3-201ENST00000266085 SLC16A13Q7RTY0 426 aa13□□□□□ -0.33
TIMP3-201ENST00000266085 NEU4Q8WWR8 484 aaPredicted RBP13□□□□□ -0.33
TIMP3-201ENST00000266085 RTBDNQ9BSG5 229 aaPredicted RBP13□□□□□ -0.33
TIMP3-201ENST00000266085 TICRRQ7Z2Z1 1910 aa13□□□□□ -0.33
TIMP3-201ENST00000266085 ZGRF1Q86YA3 2104 aa12.99□□□□□ -0.33
TIMP3-201ENST00000266085 FANCMQ8IYD8 2048 aa12.99□□□□□ -0.33
TIMP3-201ENST00000266085 KIR2DL2P43627 348 aaPredicted RBP12.99□□□□□ -0.33
TIMP3-201ENST00000266085 MFAP2P55001 183 aa12.99□□□□□ -0.33
TIMP3-201ENST00000266085 PRNTQ86SH4 94 aa12.99□□□□□ -0.33
TIMP3-201ENST00000266085 SH3BGRL3Q9H299 93 aa12.99□□□□□ -0.33
TIMP3-201ENST00000266085 TSC2P49815 1807 aa12.99□□□□□ -0.33
TIMP3-201ENST00000266085 PGPA6NDG6 321 aa12.99□□□□□ -0.33
TIMP3-201ENST00000266085 A8MWL6 223 aa12.99□□□□□ -0.33
TIMP3-201ENST00000266085 BMPR1BO00238 502 aa12.99□□□□□ -0.33
TIMP3-201ENST00000266085 HNRNPA3P51991 378 aaKnown RBP12.99□□□□□ -0.33
TIMP3-201ENST00000266085 FAM89BQ8N5H3 189 aa12.99□□□□□ -0.33
TIMP3-201ENST00000266085 SLC25A28Q96A46 364 aa12.99□□□□□ -0.33
TIMP3-201ENST00000266085 NABP1Q96AH0 204 aa12.99□□□□□ -0.33
TIMP3-201ENST00000266085 MEF2CQ06413 473 aaPredicted RBP12.99□□□□□ -0.33
TIMP3-201ENST00000266085 LY6EQ16553 131 aa12.99□□□□□ -0.33
TIMP3-201ENST00000266085 GBGT1Q8N5D6 347 aa12.99□□□□□ -0.33
TIMP3-201ENST00000266085 TEX29Q8N6K0 151 aa12.99□□□□□ -0.33
TIMP3-201ENST00000266085 NPIPB3Q92617 1050 aa12.99□□□□□ -0.33
TIMP3-201ENST00000266085 DPM3Q9P2X0 92 aa12.99□□□□□ -0.33
TIMP3-201ENST00000266085 IGHV1-18A0A0C4DH31 117 aa12.98□□□□□ -0.33
TIMP3-201ENST00000266085 REG1AP05451 166 aa12.98□□□□□ -0.33
TIMP3-201ENST00000266085 OR51G1Q8NGK1 321 aa12.98□□□□□ -0.33
TIMP3-201ENST00000266085 TRAV30A0A087WSZ9 112 aa12.98□□□□□ -0.33
TIMP3-201ENST00000266085 TEX50A0A1B0GTY4 177 aa12.98□□□□□ -0.33
TIMP3-201ENST00000266085 MSGN1A6NI15 193 aa12.98□□□□□ -0.33
TIMP3-201ENST00000266085 ID1P41134 155 aa12.98□□□□□ -0.33
TIMP3-201ENST00000266085 PAQR4Q8N4S7 273 aaPredicted RBP12.98□□□□□ -0.33
TIMP3-201ENST00000266085 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.98□□□□□ -0.33
TIMP3-201ENST00000266085 METTL26Q96S19 204 aa12.98□□□□□ -0.33
TIMP3-201ENST00000266085 TIMP3P35625 211 aa12.98□□□□□ -0.33
TIMP3-201ENST00000266085 FXYD3Q14802 87 aa12.98□□□□□ -0.33
TIMP3-201ENST00000266085 STPG3Q8N7X2 389 aa12.98□□□□□ -0.33
TIMP3-201ENST00000266085 HEATR5AQ86XA9 2040 aa12.98□□□□□ -0.33
TIMP3-201ENST00000266085 A0A0B4J293 547 aa12.98□□□□□ -0.33
TIMP3-201ENST00000266085 LY6G6EA0A0G2JKS1 128 aa12.98□□□□□ -0.33
TIMP3-201ENST00000266085 C17orf98A8MV24 154 aa12.98□□□□□ -0.33
TIMP3-201ENST00000266085 TMEM183BQ1AE95 376 aa12.98□□□□□ -0.33
TIMP3-201ENST00000266085 DGAT2L7PQ6IED9 249 aa12.98□□□□□ -0.33
TIMP3-201ENST00000266085 RBPMS2Q6ZRY4 209 aaKnown RBP12.98□□□□□ -0.33
TIMP3-201ENST00000266085 GTF3AQ92664 365 aaKnown RBP12.98□□□□□ -0.33
TIMP3-201ENST00000266085 U3KQA8 63 aa12.98□□□□□ -0.33
TIMP3-201ENST00000266085 A0A1W2PS18 150 aa12.97□□□□□ -0.33
TIMP3-201ENST00000266085 EIF3GO75821 320 aaKnown RBP eCLIP12.97□□□□□ -0.33
TIMP3-201ENST00000266085 IGHV3-48P01763 117 aa12.97□□□□□ -0.33
TIMP3-201ENST00000266085 CCKARP32238 428 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms