RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 MOGAT3Q86VF5 341 aa13.53□□□□□ -0.24
TM9SF1-201ENST00000261789 OR2T10Q8NGZ9 312 aa13.53□□□□□ -0.24
TM9SF1-201ENST00000261789 OR2V2Q96R30 315 aa13.53□□□□□ -0.24
TM9SF1-201ENST00000261789 MGST2Q99735 147 aa13.53□□□□□ -0.24
TM9SF1-201ENST00000261789 CEP250Q9BV73 2442 aa13.53□□□□□ -0.24
TM9SF1-201ENST00000261789 AQP7O14520 342 aa13.52□□□□□ -0.24
TM9SF1-201ENST00000261789 MYOD1P15172 320 aa13.52□□□□□ -0.24
TM9SF1-201ENST00000261789 FAM78BQ5VT40 261 aa13.52□□□□□ -0.24
TM9SF1-201ENST00000261789 C1orf162Q8NEQ5 155 aaPredicted RBP13.52□□□□□ -0.24
TM9SF1-201ENST00000261789 WFIKKN1Q96NZ8 548 aa13.52□□□□□ -0.24
TM9SF1-201ENST00000261789 IFI27L2Q9H2X8 130 aa13.52□□□□□ -0.24
TM9SF1-201ENST00000261789 PLCE1Q9P212 2302 aa13.52□□□□□ -0.25
TM9SF1-201ENST00000261789 ZNF318Q5VUA4 2279 aa13.52□□□□□ -0.25
TM9SF1-201ENST00000261789 SPAARA0A1B0GVQ0 90 aa13.52□□□□□ -0.25
TM9SF1-201ENST00000261789 SPRY3O43610 288 aa13.52□□□□□ -0.25
TM9SF1-201ENST00000261789 GFRA3O60609 400 aa13.52□□□□□ -0.25
TM9SF1-201ENST00000261789 NUBP1P53384 320 aa13.52□□□□□ -0.25
TM9SF1-201ENST00000261789 SPCS3P61009 180 aa13.52□□□□□ -0.25
TM9SF1-201ENST00000261789 RELBQ01201 579 aa13.52□□□□□ -0.25
TM9SF1-201ENST00000261789 BHLHA15Q7RTS1 189 aaPredicted RBP13.52□□□□□ -0.25
TM9SF1-201ENST00000261789 ANAPC16Q96DE5 110 aa13.52□□□□□ -0.25
TM9SF1-201ENST00000261789 DIRC2Q96SL1 478 aa13.52□□□□□ -0.25
TM9SF1-201ENST00000261789 TMEM140Q9NV12 185 aa13.52□□□□□ -0.25
TM9SF1-201ENST00000261789 TRBV20OR9-2A0A075B6H5 130 aa13.51□□□□□ -0.25
TM9SF1-201ENST00000261789 VDAC2P45880 294 aaPredicted RBP13.51□□□□□ -0.25
TM9SF1-201ENST00000261789 PDLIM3Q53GG5 364 aaPredicted RBP13.51□□□□□ -0.25
TM9SF1-201ENST00000261789 SEM1Q6ZVN7 128 aa13.51□□□□□ -0.25
TM9SF1-201ENST00000261789 TGIF2LYQ8IUE0 185 aa13.51□□□□□ -0.25
TM9SF1-201ENST00000261789 SARAFQ96BY9 339 aa13.51□□□□□ -0.25
TM9SF1-201ENST00000261789 C1orf159Q96HA4 380 aa13.51□□□□□ -0.25
TM9SF1-201ENST00000261789 C14orf144Q96I85 54 aa13.51□□□□□ -0.25
TM9SF1-201ENST00000261789 PROCRQ9UNN8 238 aa13.51□□□□□ -0.25
TM9SF1-201ENST00000261789 TNCP24821 2201 aa13.51□□□□□ -0.25
TM9SF1-201ENST00000261789 YLPM1P49750 1951 aaKnown RBP13.51□□□□□ -0.25
TM9SF1-201ENST00000261789 M0R1B8 84 aa13.51□□□□□ -0.25
TM9SF1-201ENST00000261789 GZMBP10144 247 aa13.51□□□□□ -0.25
TM9SF1-201ENST00000261789 RPRMLQ8N4K4 120 aa13.51□□□□□ -0.25
TM9SF1-201ENST00000261789 S1PR3Q99500 378 aa13.51□□□□□ -0.25
TM9SF1-201ENST00000261789 GGTLC1Q9BX51 225 aa13.51□□□□□ -0.25
TM9SF1-201ENST00000261789 JPT1Q9UK76 154 aa13.51□□□□□ -0.25
TM9SF1-201ENST00000261789 PXMP4Q9Y6I8 212 aa13.51□□□□□ -0.25
TM9SF1-201ENST00000261789 PRSS46E5RG02 174 aa13.5□□□□□ -0.25
TM9SF1-201ENST00000261789 MGST3O14880 152 aa13.5□□□□□ -0.25
TM9SF1-201ENST00000261789 RBFOX2O43251 390 aaKnown RBP eCLIP13.5□□□□□ -0.25
TM9SF1-201ENST00000261789 ERVK-16P61578 105 aa13.5□□□□□ -0.25
TM9SF1-201ENST00000261789 ZNF600Q6ZNG1 722 aa13.5□□□□□ -0.25
TM9SF1-201ENST00000261789 DEFB124Q8NES8 71 aa13.5□□□□□ -0.25
TM9SF1-201ENST00000261789 SLC25A15Q9Y619 301 aa13.5□□□□□ -0.25
TM9SF1-201ENST00000261789 A0A1B0GUS0 222 aa13.5□□□□□ -0.25
TM9SF1-201ENST00000261789 YPEL1O60688 119 aa13.5□□□□□ -0.25
TM9SF1-201ENST00000261789 GGCTO75223 188 aaKnown RBP13.5□□□□□ -0.25
TM9SF1-201ENST00000261789 CGAP01215 116 aa13.5□□□□□ -0.25
TM9SF1-201ENST00000261789 DEFB109BQ30KR1 87 aa13.5□□□□□ -0.25
TM9SF1-201ENST00000261789 SPATA31B1PQ5VZV4 182 aa13.5□□□□□ -0.25
TM9SF1-201ENST00000261789 YPEL2Q96QA6 119 aa13.5□□□□□ -0.25
TM9SF1-201ENST00000261789 TRAV17A0A0B4J275 112 aa13.49□□□□□ -0.25
TM9SF1-201ENST00000261789 A0A0U1RQK1 487 aa13.49□□□□□ -0.25
TM9SF1-201ENST00000261789 GATCO43716 136 aaKnown RBP13.49□□□□□ -0.25
TM9SF1-201ENST00000261789 VENTXO95231 258 aa13.49□□□□□ -0.25
TM9SF1-201ENST00000261789 IL3RAP26951 378 aa13.49□□□□□ -0.25
TM9SF1-201ENST00000261789 ACTL10Q5JWF8 245 aa13.49□□□□□ -0.25
TM9SF1-201ENST00000261789 TRAT1Q6PIZ9 186 aa13.49□□□□□ -0.25
TM9SF1-201ENST00000261789 CALYQ9NYX4 217 aa13.49□□□□□ -0.25
TM9SF1-201ENST00000261789 TCF19Q9Y242 345 aa13.49□□□□□ -0.25
TM9SF1-201ENST00000261789 BSNQ9UPA5 3926 aa13.49□□□□□ -0.25
TM9SF1-201ENST00000261789 SCO2A0A1W2PP80 73 aa13.49□□□□□ -0.25
TM9SF1-201ENST00000261789 PDE6DO43924 150 aa13.49□□□□□ -0.25
TM9SF1-201ENST00000261789 ROS1P08922 2347 aa13.49□□□□□ -0.25
TM9SF1-201ENST00000261789 AARDQ4LEZ3 155 aa13.49□□□□□ -0.25
TM9SF1-201ENST00000261789 CT45A1Q5HYN5 189 aa13.49□□□□□ -0.25
TM9SF1-201ENST00000261789 DEFB108BQ8NET1 73 aa13.49□□□□□ -0.25
TM9SF1-201ENST00000261789 CT45A3Q8NHU0 189 aa13.49□□□□□ -0.25
TM9SF1-201ENST00000261789 ITLN1Q8WWA0 313 aa13.49□□□□□ -0.25
TM9SF1-201ENST00000261789 FAM122AQ96E09 287 aa13.49□□□□□ -0.25
TM9SF1-201ENST00000261789 HINT2Q9BX68 163 aa13.49□□□□□ -0.25
TM9SF1-201ENST00000261789 SEPSECSQ9HD40 501 aaKnown RBP13.49□□□□□ -0.25
TM9SF1-201ENST00000261789 ZNF320A2RRD8 509 aa13.48□□□□□ -0.25
TM9SF1-201ENST00000261789 OPRK1P41145 380 aa13.48□□□□□ -0.25
TM9SF1-201ENST00000261789 ARSJQ5FYB0 599 aaPredicted RBP13.48□□□□□ -0.25
TM9SF1-201ENST00000261789 ZNRD1Q9P1U0 126 aa13.48□□□□□ -0.25
TM9SF1-201ENST00000261789 ZNF705GA8MUZ8 300 aaPredicted RBP13.48□□□□□ -0.25
TM9SF1-201ENST00000261789 FOXH1O75593 365 aa13.48□□□□□ -0.25
TM9SF1-201ENST00000261789 PAX5Q02548 391 aa13.48□□□□□ -0.25
TM9SF1-201ENST00000261789 JOSD1Q15040 202 aaPredicted RBP13.48□□□□□ -0.25
TM9SF1-201ENST00000261789 TCF23Q7RTU1 214 aa13.48□□□□□ -0.25
TM9SF1-201ENST00000261789 ARFGEF3Q5TH69 2177 aa13.47□□□□□ -0.25
TM9SF1-201ENST00000261789 OTOGLQ3ZCN5 2332 aa13.47□□□□□ -0.25
TM9SF1-201ENST00000261789 SAA2-SAA4A0A096LPE2 208 aa13.47□□□□□ -0.25
TM9SF1-201ENST00000261789 A0A1B0GWJ7 208 aa13.47□□□□□ -0.25
TM9SF1-201ENST00000261789 SAA2P0DJI9 122 aaPredicted RBP13.47□□□□□ -0.25
TM9SF1-201ENST00000261789 DDTP30046 118 aa13.47□□□□□ -0.25
TM9SF1-201ENST00000261789 SRP14P37108 136 aaKnown RBP13.47□□□□□ -0.25
TM9SF1-201ENST00000261789 THBS3P49746 956 aa13.47□□□□□ -0.25
TM9SF1-201ENST00000261789 C17orf58Q2M2W7 97 aa13.47□□□□□ -0.25
TM9SF1-201ENST00000261789 IGFL2Q6UWQ7 119 aa13.47□□□□□ -0.25
TM9SF1-201ENST00000261789 DDB2Q92466 427 aa13.47□□□□□ -0.25
TM9SF1-201ENST00000261789 RAB1CQ92928 201 aa13.47□□□□□ -0.25
TM9SF1-201ENST00000261789 ASCL3Q9NQ33 180 aa13.47□□□□□ -0.25
TM9SF1-201ENST00000261789 KCNIP2Q9NS61 270 aa13.47□□□□□ -0.25
TM9SF1-201ENST00000261789 YTHDF2Q9Y5A9 579 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms