RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 FAM90A20PA6NIJ5 464 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 LRRC3CA6NJW4 275 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 J3QRE1 110 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 FFAR1O14842 300 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 OR9G9P0C7N8 305 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 TAL2Q16559 108 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 GGTA1PQ4G0N0 100 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 RPTNQ6XPR3 784 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 LIAT1Q6ZQX7 453 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 BPIFA4PQ86YQ2 179 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 ATP6V0E2Q8NHE4 81 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 SLC37A2Q8TED4 501 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 GNB4Q9HAV0 340 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 RPRMQ9NS64 109 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 FAM90A26D6RGX4 464 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 DEDDO75618 318 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 CD3EP07766 207 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 MRPL3P09001 348 aaKnown RBP6.47□□□□□ -1.37
GPNMB-201ENST00000258733 RPS14P62263 151 aaKnown RBP6.47□□□□□ -1.37
GPNMB-201ENST00000258733 FMODQ06828 376 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 IBA57Q5T440 356 aaKnown RBP6.47□□□□□ -1.37
GPNMB-201ENST00000258733 Q6Q795 121 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 MRGPREQ86SM8 312 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 SCGB1C1Q8TD33 95 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 SSBP3Q9BWW4 388 aaPredicted RBP6.47□□□□□ -1.37
GPNMB-201ENST00000258733 MRPL18Q9H0U6 180 aaKnown RBP6.47□□□□□ -1.37
GPNMB-201ENST00000258733 PRDM6Q9NQX0 595 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 KLK13Q9UKR3 277 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 HILPDAQ9Y5L2 63 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 SCN5AQ14524 2016 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 DOCK11Q5JSL3 2073 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 A0A1W2PR77 199 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 ZFP92A6NM28 416 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 SYS1-DBNDD2H3BUS1 97 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 STK17BO94768 372 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 P04436 131 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 SP9P0CG40 484 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 STC1P52823 247 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 HERVK_113P63121 156 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 TSPO2Q5TGU0 170 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 ZNF324BQ6AW86 544 aaPredicted RBP6.47□□□□□ -1.37
GPNMB-201ENST00000258733 ZNF695Q8IW36 515 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 RAB42Q8N4Z0 105 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 OR1L1Q8NH94 360 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 AJUBAQ96IF1 538 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 SLC25A39Q9BZJ4 359 aaPredicted RBP6.47□□□□□ -1.37
GPNMB-201ENST00000258733 PELI2Q9HAT8 420 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 SPANXCQ9NY87 97 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 C21orf62Q9NYP8 219 aa6.47□□□□□ -1.37
GPNMB-201ENST00000258733 TRAV5A0A0B4J249 113 aa6.46□□□□□ -1.38
GPNMB-201ENST00000258733 A0A0B4J2E0 115 aa6.46□□□□□ -1.38
GPNMB-201ENST00000258733 A0A1B0GX12 115 aa6.46□□□□□ -1.38
GPNMB-201ENST00000258733 NDUFA7O95182 113 aa6.46□□□□□ -1.38
GPNMB-201ENST00000258733 EWSR1Q01844 656 aaKnown RBP eCLIP6.46□□□□□ -1.38
GPNMB-201ENST00000258733 ZNF141Q15928 474 aa6.46□□□□□ -1.38
GPNMB-201ENST00000258733 RSPO2Q6UXX9 243 aaPredicted RBP6.46□□□□□ -1.38
GPNMB-201ENST00000258733 Q6ZT83 130 aa6.46□□□□□ -1.38
GPNMB-201ENST00000258733 C2orf91Q6ZV80 131 aa6.46□□□□□ -1.38
GPNMB-201ENST00000258733 TMEM150AQ86TG1 271 aa6.46□□□□□ -1.38
GPNMB-201ENST00000258733 CLDN23Q96B33 292 aa6.46□□□□□ -1.38
GPNMB-201ENST00000258733 PMCHL2Q9BQD1 86 aa6.46□□□□□ -1.38
GPNMB-201ENST00000258733 TMEM30AQ9NV96 361 aa6.46□□□□□ -1.38
GPNMB-201ENST00000258733 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.46□□□□□ -1.38
GPNMB-201ENST00000258733 GOLGA4Q13439 2230 aaKnown RBP6.46□□□□□ -1.38
GPNMB-201ENST00000258733 FAM236DA0A1B0GTK5 79 aa6.46□□□□□ -1.38
GPNMB-201ENST00000258733 A0A1B0GWB2 263 aa6.46□□□□□ -1.38
GPNMB-201ENST00000258733 J3QLW9 94 aa6.46□□□□□ -1.38
GPNMB-201ENST00000258733 IGHV3-7P01780 117 aa6.46□□□□□ -1.38
GPNMB-201ENST00000258733 FAM236CP0DP71 79 aa6.46□□□□□ -1.38
GPNMB-201ENST00000258733 CBLN1P23435 193 aa6.46□□□□□ -1.38
GPNMB-201ENST00000258733 LIM2P55344 173 aa6.46□□□□□ -1.38
GPNMB-201ENST00000258733 UBE2G1P62253 170 aa6.46□□□□□ -1.38
GPNMB-201ENST00000258733 FAM27E3Q08E93 113 aa6.46□□□□□ -1.38
GPNMB-201ENST00000258733 GAGE13Q4V321 117 aa6.46□□□□□ -1.38
GPNMB-201ENST00000258733 STHQ8IWL8 128 aa6.46□□□□□ -1.38
GPNMB-201ENST00000258733 FAM19A2Q8N3H0 131 aa6.46□□□□□ -1.38
GPNMB-201ENST00000258733 TMEM99Q8N816 258 aa6.46□□□□□ -1.38
GPNMB-201ENST00000258733 RPS4Y2Q8TD47 263 aa6.46□□□□□ -1.38
GPNMB-201ENST00000258733 BADQ92934 168 aa6.46□□□□□ -1.38
GPNMB-201ENST00000258733 RNF166Q96A37 237 aaPredicted RBP6.46□□□□□ -1.38
GPNMB-201ENST00000258733 ZBTB45Q96K62 511 aaPredicted RBP6.46□□□□□ -1.38
GPNMB-201ENST00000258733 PLA2G12AQ9BZM1 189 aa6.46□□□□□ -1.38
GPNMB-201ENST00000258733 SPRY4Q9C004 299 aa6.46□□□□□ -1.38
GPNMB-201ENST00000258733 CLDND1Q9NY35 253 aa6.46□□□□□ -1.38
GPNMB-201ENST00000258733 PAPPA2Q9BXP8 1791 aa6.45□□□□□ -1.38
GPNMB-201ENST00000258733 FAM90A8PA6NJQ4 464 aa6.45□□□□□ -1.38
GPNMB-201ENST00000258733 PGLYRP1O75594 196 aaPredicted RBP6.45□□□□□ -1.38
GPNMB-201ENST00000258733 SNCGO76070 127 aa6.45□□□□□ -1.38
GPNMB-201ENST00000258733 MT-ND6P03923 174 aa6.45□□□□□ -1.38
GPNMB-201ENST00000258733 FAM90A13PP0C7W8 464 aa6.45□□□□□ -1.38
GPNMB-201ENST00000258733 FAM90A24PP0C7X0 464 aa6.45□□□□□ -1.38
GPNMB-201ENST00000258733 PLA2G5P39877 138 aa6.45□□□□□ -1.38
GPNMB-201ENST00000258733 KIR2DS2P43631 304 aa6.45□□□□□ -1.38
GPNMB-201ENST00000258733 MRPS6P82932 125 aaKnown RBP6.45□□□□□ -1.38
GPNMB-201ENST00000258733 HES1Q14469 280 aa6.45□□□□□ -1.38
GPNMB-201ENST00000258733 AGERQ15109 404 aa6.45□□□□□ -1.38
GPNMB-201ENST00000258733 CEACAM16Q2WEN9 425 aa6.45□□□□□ -1.38
GPNMB-201ENST00000258733 OR8B3Q8NGG8 313 aa6.45□□□□□ -1.38
GPNMB-201ENST00000258733 LMX1AQ8TE12 382 aa6.45□□□□□ -1.38
GPNMB-201ENST00000258733 SLC25A44Q96H78 314 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms