RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 C2CD4DB7Z1M9 353 aa11.86□□□□□ -0.51
TARDBP-201ENST00000240185 CISD3P0C7P0 127 aa11.86□□□□□ -0.51
TARDBP-201ENST00000240185 ICAM4Q14773 271 aa11.86□□□□□ -0.51
TARDBP-201ENST00000240185 LINC00305Q7Z4B0 112 aa11.86□□□□□ -0.51
TARDBP-201ENST00000240185 C9orf40Q8IXQ3 194 aa11.86□□□□□ -0.51
TARDBP-201ENST00000240185 DPH3Q96FX2 82 aa11.86□□□□□ -0.51
TARDBP-201ENST00000240185 RAX2Q96IS3 184 aa11.86□□□□□ -0.51
TARDBP-201ENST00000240185 MUC21A0A0G2JKD1 596 aa11.85□□□□□ -0.51
TARDBP-201ENST00000240185 MUC21A0A140T8X8 626 aa11.85□□□□□ -0.51
TARDBP-201ENST00000240185 SCO2A0A1W2PP80 73 aa11.85□□□□□ -0.51
TARDBP-201ENST00000240185 C9JCJ5 164 aa11.85□□□□□ -0.51
TARDBP-201ENST00000240185 CGAP01215 116 aa11.85□□□□□ -0.51
TARDBP-201ENST00000240185 IL6RP08887 468 aaPredicted RBP11.85□□□□□ -0.51
TARDBP-201ENST00000240185 DRD3P35462 400 aa11.85□□□□□ -0.51
TARDBP-201ENST00000240185 MUC21Q5SSG8 566 aa11.85□□□□□ -0.51
TARDBP-201ENST00000240185 TMEM170AQ8WVE7 144 aa11.85□□□□□ -0.51
TARDBP-201ENST00000240185 NPCDR1Q9BY65 106 aa11.85□□□□□ -0.51
TARDBP-201ENST00000240185 GLI3P10071 1580 aa11.85□□□□□ -0.51
TARDBP-201ENST00000240185 TRAV9-1A0A075B6T8 112 aa11.85□□□□□ -0.51
TARDBP-201ENST00000240185 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.85□□□□□ -0.51
TARDBP-201ENST00000240185 ZNF826PQ6ZT77 177 aa11.85□□□□□ -0.51
TARDBP-201ENST00000240185 TBX6O95947 436 aaPredicted RBP11.85□□□□□ -0.51
TARDBP-201ENST00000240185 FAM106CPP0CH98 169 aa11.85□□□□□ -0.51
TARDBP-201ENST00000240185 IL11P20809 199 aa11.85□□□□□ -0.51
TARDBP-201ENST00000240185 UCP3P55916 312 aa11.85□□□□□ -0.51
TARDBP-201ENST00000240185 VKORC1L1Q8N0U8 176 aa11.85□□□□□ -0.51
TARDBP-201ENST00000240185 CT55Q8WUE5 264 aa11.85□□□□□ -0.51
TARDBP-201ENST00000240185 ORAOV1Q8WV07 137 aa11.85□□□□□ -0.51
TARDBP-201ENST00000240185 COL16A1Q07092 1604 aaPredicted RBP11.85□□□□□ -0.51
TARDBP-201ENST00000240185 FAM186AA6NE01 2351 aa11.85□□□□□ -0.51
TARDBP-201ENST00000240185 ODAMA1E959 279 aa11.85□□□□□ -0.51
TARDBP-201ENST00000240185 A8MWV9 139 aa11.85□□□□□ -0.51
TARDBP-201ENST00000240185 TSPOP30536 169 aa11.85□□□□□ -0.51
TARDBP-201ENST00000240185 ZNF585BQ52M93 769 aa11.85□□□□□ -0.51
TARDBP-201ENST00000240185 WDR82Q6UXN9 313 aa11.85□□□□□ -0.51
TARDBP-201ENST00000240185 LINC01565O15544 149 aa11.84□□□□□ -0.51
TARDBP-201ENST00000240185 UCP2P55851 309 aa11.84□□□□□ -0.51
TARDBP-201ENST00000240185 ZFAND6Q6FIF0 208 aa11.84□□□□□ -0.51
TARDBP-201ENST00000240185 CALYQ9NYX4 217 aa11.84□□□□□ -0.51
TARDBP-201ENST00000240185 CYSLTR1Q9Y271 337 aa11.84□□□□□ -0.51
TARDBP-201ENST00000240185 MOSP00540 346 aa11.84□□□□□ -0.51
TARDBP-201ENST00000240185 IGKV1D-16P01601 117 aa11.84□□□□□ -0.51
TARDBP-201ENST00000240185 FTH1P19P0C7X4 201 aa11.84□□□□□ -0.51
TARDBP-201ENST00000240185 UNQ9370/PRO34162Q6UXP9 181 aa11.84□□□□□ -0.51
TARDBP-201ENST00000240185 TRAV21A0A0B4J279 112 aa11.84□□□□□ -0.51
TARDBP-201ENST00000240185 PEX7O00628 323 aa11.84□□□□□ -0.51
TARDBP-201ENST00000240185 FOXC1Q12948 553 aa11.84□□□□□ -0.51
TARDBP-201ENST00000240185 SRSF6Q13247 344 aaKnown RBP11.84□□□□□ -0.51
TARDBP-201ENST00000240185 ORMDL3Q8N138 153 aa11.84□□□□□ -0.51
TARDBP-201ENST00000240185 ZNF71Q9NQZ8 489 aaPredicted RBP11.84□□□□□ -0.51
TARDBP-201ENST00000240185 RBMY1BA6NDE4 496 aaKnown RBP11.84□□□□□ -0.51
TARDBP-201ENST00000240185 RBMY1EA6NEQ0 496 aaKnown RBP11.84□□□□□ -0.51
TARDBP-201ENST00000240185 H3BRM9 83 aa11.84□□□□□ -0.51
TARDBP-201ENST00000240185 UBE2CO00762 179 aa11.84□□□□□ -0.51
TARDBP-201ENST00000240185 SYNGR3O43761 229 aa11.84□□□□□ -0.51
TARDBP-201ENST00000240185 CEACAM4O75871 244 aa11.84□□□□□ -0.51
TARDBP-201ENST00000240185 NBEAP1P0C6P0 100 aa11.84□□□□□ -0.51
TARDBP-201ENST00000240185 RBMY1DP0C7P1 496 aaKnown RBP11.84□□□□□ -0.51
TARDBP-201ENST00000240185 RBMY1A1P0DJD3 496 aaKnown RBP11.84□□□□□ -0.51
TARDBP-201ENST00000240185 RBMY1CP0DJD4 496 aa11.84□□□□□ -0.51
TARDBP-201ENST00000240185 TMEM52Q8NDY8 209 aa11.84□□□□□ -0.51
TARDBP-201ENST00000240185 Q96M66 194 aa11.84□□□□□ -0.51
TARDBP-201ENST00000240185 A0A0J9YW62 118 aa11.83□□□□□ -0.51
TARDBP-201ENST00000240185 A0A1W2PPV9 198 aa11.83□□□□□ -0.51
TARDBP-201ENST00000240185 HIST1H2BKO60814 126 aa11.83□□□□□ -0.51
TARDBP-201ENST00000240185 HIST1H2BJP06899 126 aa11.83□□□□□ -0.51
TARDBP-201ENST00000240185 HIST1H2BOP23527 126 aa11.83□□□□□ -0.51
TARDBP-201ENST00000240185 HIST1H2BBP33778 126 aa11.83□□□□□ -0.51
TARDBP-201ENST00000240185 ATP5G3P48201 142 aa11.83□□□□□ -0.51
TARDBP-201ENST00000240185 HIST1H2BDP58876 126 aa11.83□□□□□ -0.51
TARDBP-201ENST00000240185 HIST1H2BCP62807 126 aa11.83□□□□□ -0.51
TARDBP-201ENST00000240185 HIST2H2BEQ16778 126 aa11.83□□□□□ -0.51
TARDBP-201ENST00000240185 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.83□□□□□ -0.51
TARDBP-201ENST00000240185 CLDND2Q8NHS1 167 aa11.83□□□□□ -0.51
TARDBP-201ENST00000240185 HIST1H2BHQ93079 126 aa11.83□□□□□ -0.51
TARDBP-201ENST00000240185 ZNF479Q96JC4 524 aa11.83□□□□□ -0.51
TARDBP-201ENST00000240185 HIST1H2BNQ99877 126 aa11.83□□□□□ -0.51
TARDBP-201ENST00000240185 HIST1H2BMQ99879 126 aa11.83□□□□□ -0.51
TARDBP-201ENST00000240185 TOMM7Q9P0U1 55 aa11.83□□□□□ -0.51
TARDBP-201ENST00000240185 COL22A1Q8NFW1 1626 aaPredicted RBP11.83□□□□□ -0.52
TARDBP-201ENST00000240185 CNTFRP26992 372 aa11.83□□□□□ -0.52
TARDBP-201ENST00000240185 C2orf88Q9BSF0 95 aa11.83□□□□□ -0.52
TARDBP-201ENST00000240185 RPP21Q9H633 154 aaKnown RBP11.83□□□□□ -0.52
TARDBP-201ENST00000240185 ZNHIT1O43257 154 aa11.83□□□□□ -0.52
TARDBP-201ENST00000240185 GAGE13Q4V321 117 aa11.83□□□□□ -0.52
TARDBP-201ENST00000240185 TNFRSF18Q9Y5U5 241 aa11.83□□□□□ -0.52
TARDBP-201ENST00000240185 ARAP2Q8WZ64 1704 aa11.83□□□□□ -0.52
TARDBP-201ENST00000240185 IZUMO1RA6ND01 250 aa11.83□□□□□ -0.52
TARDBP-201ENST00000240185 HOXA3O43365 443 aaPredicted RBP11.83□□□□□ -0.52
TARDBP-201ENST00000240185 ZNF146Q15072 292 aa11.83□□□□□ -0.52
TARDBP-201ENST00000240185 VKORC1Q9BQB6 163 aa11.83□□□□□ -0.52
TARDBP-201ENST00000240185 IGLV1-36A0A0B4J1U3 117 aa11.82□□□□□ -0.52
TARDBP-201ENST00000240185 LOC390937A0A1W2PQ73 354 aa11.82□□□□□ -0.52
TARDBP-201ENST00000240185 C16orf97H3BN30 126 aa11.82□□□□□ -0.52
TARDBP-201ENST00000240185 H7C1H1 209 aa11.82□□□□□ -0.52
TARDBP-201ENST00000240185 DLEU1O43261 78 aa11.82□□□□□ -0.52
TARDBP-201ENST00000240185 PEAR1Q5VY43 1037 aaPredicted RBP11.82□□□□□ -0.52
TARDBP-201ENST00000240185 DRAM1Q8N682 238 aa11.82□□□□□ -0.52
TARDBP-201ENST00000240185 IGHV3-35A0A0C4DH35 117 aa11.82□□□□□ -0.52
TARDBP-201ENST00000240185 NPPCP23582 126 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms