RNA–Protein interactions for RNA: ENST00000231526.8

TRAPPC13-201, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRAPPC13, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-201ENST00000231526 PET100P0DJ07 73 aa4.47□□□□□ -1.69
TRAPPC13-201ENST00000231526 IGHV3-43DP0DP04 118 aa4.47□□□□□ -1.69
TRAPPC13-201ENST00000231526 BLOC1S1P78537 153 aa4.47□□□□□ -1.69
TRAPPC13-201ENST00000231526 SRSF4Q08170 494 aaKnown RBP4.47□□□□□ -1.69
TRAPPC13-201ENST00000231526 HMGN3Q15651 99 aa4.47□□□□□ -1.69
TRAPPC13-201ENST00000231526 FBXL19-AS1Q494R0 122 aa4.47□□□□□ -1.69
TRAPPC13-201ENST00000231526 FAM159AQ6UWV7 190 aa4.47□□□□□ -1.69
TRAPPC13-201ENST00000231526 ALKAL2Q6UX46 152 aa4.47□□□□□ -1.69
TRAPPC13-201ENST00000231526 TMUB2Q71RG4 321 aa4.47□□□□□ -1.69
TRAPPC13-201ENST00000231526 ZNF695Q8IW36 515 aa4.47□□□□□ -1.69
TRAPPC13-201ENST00000231526 SLC35G3Q8N808 338 aa4.47□□□□□ -1.69
TRAPPC13-201ENST00000231526 NECAP1Q8NC96 275 aa4.47□□□□□ -1.69
TRAPPC13-201ENST00000231526 OR13A1Q8NGR1 328 aa4.47□□□□□ -1.69
TRAPPC13-201ENST00000231526 DCUN1D4Q92564 292 aa4.47□□□□□ -1.69
TRAPPC13-201ENST00000231526 MSI2Q96DH6 328 aaKnown RBP4.47□□□□□ -1.69
TRAPPC13-201ENST00000231526 CXorf58Q96LI9 332 aa4.47□□□□□ -1.69
TRAPPC13-201ENST00000231526 DCTN5Q9BTE1 182 aa4.47□□□□□ -1.69
TRAPPC13-201ENST00000231526 PARP12Q9H0J9 701 aaKnown RBP4.47□□□□□ -1.69
TRAPPC13-201ENST00000231526 PSG11Q9UQ72 335 aa4.47□□□□□ -1.69
TRAPPC13-201ENST00000231526 GOLT1BQ9Y3E0 138 aa4.47□□□□□ -1.69
TRAPPC13-201ENST00000231526 USP24Q9UPU5 2620 aa4.47□□□□□ -1.69
TRAPPC13-201ENST00000231526 DSCAML1Q8TD84 2053 aa4.47□□□□□ -1.69
TRAPPC13-201ENST00000231526 DEFB108AA8MXU0 73 aa4.46□□□□□ -1.69
TRAPPC13-201ENST00000231526 K7N7A8 449 aa4.46□□□□□ -1.69
TRAPPC13-201ENST00000231526 MGST3O14880 152 aa4.46□□□□□ -1.69
TRAPPC13-201ENST00000231526 SPINT2O43291 252 aa4.46□□□□□ -1.69
TRAPPC13-201ENST00000231526 PGLYRP1O75594 196 aaPredicted RBP4.46□□□□□ -1.69
TRAPPC13-201ENST00000231526 GYPAP02724 150 aa4.46□□□□□ -1.69
TRAPPC13-201ENST00000231526 OMGP23515 440 aa4.46□□□□□ -1.69
TRAPPC13-201ENST00000231526 UQCRFS1P47985 274 aa4.46□□□□□ -1.69
TRAPPC13-201ENST00000231526 CRYBA4P53673 196 aa4.46□□□□□ -1.69
TRAPPC13-201ENST00000231526 MRPS11P82912 194 aaKnown RBP4.46□□□□□ -1.69
TRAPPC13-201ENST00000231526 FOXE3Q13461 319 aa4.46□□□□□ -1.69
TRAPPC13-201ENST00000231526 BSXQ3C1V8 233 aa4.46□□□□□ -1.69
TRAPPC13-201ENST00000231526 FAM53AQ6NSI3 398 aaPredicted RBP4.46□□□□□ -1.69
TRAPPC13-201ENST00000231526 ACOT7LQ6ZUV0 252 aa4.46□□□□□ -1.69
TRAPPC13-201ENST00000231526 LDLRAD3Q86YD5 345 aa4.46□□□□□ -1.69
TRAPPC13-201ENST00000231526 C11orf44Q8N8P7 122 aa4.46□□□□□ -1.69
TRAPPC13-201ENST00000231526 OR52L2PQ8NGH6 319 aa4.46□□□□□ -1.69
TRAPPC13-201ENST00000231526 PFDN5Q99471 154 aa4.46□□□□□ -1.69
TRAPPC13-201ENST00000231526 RSG1Q9BU20 258 aa4.46□□□□□ -1.69
TRAPPC13-201ENST00000231526 TMEM222Q9H0R3 208 aa4.46□□□□□ -1.69
TRAPPC13-201ENST00000231526 FLNCQ14315 2725 aa4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 TANC2Q9HCD6 1990 aa4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 HRNRQ86YZ3 2850 aaPredicted RBP4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 FAM208BQ5VWN6 2430 aa4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 CRYBG3Q68DQ2 2970 aa4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 A0A0D9SG52 128 aa4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 KANTRA0A1W2PQU2 76 aa4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 ODAMA1E959 279 aa4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 TMEM8BA6NDV4 472 aa4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 NPIPB11E5RHQ5 1161 aa4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 ZG16O60844 167 aa4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 OR2J3O76001 311 aa4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 IGHV3-7P01780 117 aa4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 RLN2P04090 185 aa4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 SLC25A4P12235 298 aa4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 GZMHP20718 246 aa4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 F2RP25116 425 aa4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 PPP1CCP36873 323 aaKnown RBP4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 SRPXP78539 464 aa4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 OR2F1Q13607 317 aa4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 ACSM6Q6P461 480 aa4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 MUC15Q8N387 334 aa4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 CCL13Q99616 98 aa4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 ATG101Q9BSB4 218 aa4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 REG4Q9BYZ8 158 aa4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 OR2D2Q9H210 308 aa4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 GAR1Q9NY12 217 aaKnown RBP4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 GNG12Q9UBI6 72 aa4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 TNFSF18Q9UNG2 199 aa4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 LSM5Q9Y4Y9 91 aaKnown RBP4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 MAP1AP78559 2803 aaPredicted RBP4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 SVEP1Q4LDE5 3571 aa4.46□□□□□ -1.7
TRAPPC13-201ENST00000231526 A0A1B0GW55 424 aa4.45□□□□□ -1.7
TRAPPC13-201ENST00000231526 RNF222A6NCQ9 220 aa4.45□□□□□ -1.7
TRAPPC13-201ENST00000231526 H0YIZ8 118 aa4.45□□□□□ -1.7
TRAPPC13-201ENST00000231526 M0QZ24 198 aa4.45□□□□□ -1.7
TRAPPC13-201ENST00000231526 SIGLEC5O15389 551 aa4.45□□□□□ -1.7
TRAPPC13-201ENST00000231526 GAPDHP04406 335 aaKnown RBP4.45□□□□□ -1.7
TRAPPC13-201ENST00000231526 DUX4L2P0CJ85 424 aa4.45□□□□□ -1.7
TRAPPC13-201ENST00000231526 DUX4L3P0CJ86 424 aa4.45□□□□□ -1.7
TRAPPC13-201ENST00000231526 DUX4L4P0CJ87 422 aa4.45□□□□□ -1.7
TRAPPC13-201ENST00000231526 DUX4L5P0CJ88 424 aa4.45□□□□□ -1.7
TRAPPC13-201ENST00000231526 DUX4L6P0CJ89 424 aa4.45□□□□□ -1.7
TRAPPC13-201ENST00000231526 DUX4L7P0CJ90 424 aa4.45□□□□□ -1.7
TRAPPC13-201ENST00000231526 MUC1P15941 1255 aaPredicted RBP4.45□□□□□ -1.7
TRAPPC13-201ENST00000231526 RPL15P61313 204 aaKnown RBP4.45□□□□□ -1.7
TRAPPC13-201ENST00000231526 RND3P61587 244 aa4.45□□□□□ -1.7
TRAPPC13-201ENST00000231526 SRSF1Q07955 248 aaKnown RBP eCLIP4.45□□□□□ -1.7
TRAPPC13-201ENST00000231526 GAGE1Q13065 139 aa4.45□□□□□ -1.7
TRAPPC13-201ENST00000231526 GNMTQ14749 295 aa4.45□□□□□ -1.7
TRAPPC13-201ENST00000231526 MST1LQ2TV78 715 aa4.45□□□□□ -1.7
TRAPPC13-201ENST00000231526 C6orf226Q5I0X4 101 aa4.45□□□□□ -1.7
TRAPPC13-201ENST00000231526 DUX4L9Q6RFH8 374 aaPredicted RBP4.45□□□□□ -1.7
TRAPPC13-201ENST00000231526 STPG2Q8N412 459 aa4.45□□□□□ -1.7
TRAPPC13-201ENST00000231526 ZNF808Q8N4W9 903 aaPredicted RBP4.45□□□□□ -1.7
TRAPPC13-201ENST00000231526 LRTM2Q8N967 370 aa4.45□□□□□ -1.7
TRAPPC13-201ENST00000231526 RNF126Q9BV68 326 aa4.45□□□□□ -1.7
TRAPPC13-201ENST00000231526 ZNF471Q9BX82 626 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms