RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 DPRXA6NFQ7 191 aa11.77□□□□□ -0.53
SF1-201ENST00000227503 PDE6DO43924 150 aa11.77□□□□□ -0.53
SF1-201ENST00000227503 ZNF253O75346 499 aa11.77□□□□□ -0.53
SF1-201ENST00000227503 ESDP10768 282 aa11.77□□□□□ -0.53
SF1-201ENST00000227503 CD99P14209 185 aa11.77□□□□□ -0.53
SF1-201ENST00000227503 SRIP30626 198 aa11.77□□□□□ -0.53
SF1-201ENST00000227503 ASPMQ8IZT6 3477 aa11.76□□□□□ -0.53
SF1-201ENST00000227503 C5orf49A4QMS7 147 aa11.76□□□□□ -0.53
SF1-201ENST00000227503 S1PR2O95136 353 aa11.76□□□□□ -0.53
SF1-201ENST00000227503 CTXN2P0C2S0 81 aa11.76□□□□□ -0.53
SF1-201ENST00000227503 SPINK14Q6IE38 97 aa11.76□□□□□ -0.53
SF1-201ENST00000227503 NIT1Q86X76 327 aa11.76□□□□□ -0.53
SF1-201ENST00000227503 MMD2Q8IY49 270 aa11.76□□□□□ -0.53
SF1-201ENST00000227503 CT55Q8WUE5 264 aa11.76□□□□□ -0.53
SF1-201ENST00000227503 GMPPAQ96IJ6 420 aaPredicted RBP11.76□□□□□ -0.53
SF1-201ENST00000227503 IL36BQ9NZH7 164 aa11.76□□□□□ -0.53
SF1-201ENST00000227503 GPR179Q6PRD1 2367 aa11.76□□□□□ -0.53
SF1-201ENST00000227503 K7EP13 123 aa11.76□□□□□ -0.53
SF1-201ENST00000227503 SS18L1O75177 396 aaPredicted RBP11.76□□□□□ -0.53
SF1-201ENST00000227503 LGALS4P56470 323 aa11.76□□□□□ -0.53
SF1-201ENST00000227503 RPL31P62899 125 aaKnown RBP11.76□□□□□ -0.53
SF1-201ENST00000227503 HTD2P86397 168 aa11.76□□□□□ -0.53
SF1-201ENST00000227503 SPATA31B1PQ5VZV4 182 aa11.76□□□□□ -0.53
SF1-201ENST00000227503 DOLPP1Q86YN1 238 aa11.76□□□□□ -0.53
SF1-201ENST00000227503 MKXQ8IYA7 352 aa11.76□□□□□ -0.53
SF1-201ENST00000227503 Q8N7P7 452 aa11.76□□□□□ -0.53
SF1-201ENST00000227503 RNASE7Q9H1E1 156 aaKnown RBP11.76□□□□□ -0.53
SF1-201ENST00000227503 TMEM265A0A087WTH1 108 aa11.75□□□□□ -0.53
SF1-201ENST00000227503 IGHV2OR16-5A0A0B4J2B6 119 aa11.75□□□□□ -0.53
SF1-201ENST00000227503 NGFP01138 241 aa11.75□□□□□ -0.53
SF1-201ENST00000227503 PSG1P11464 419 aa11.75□□□□□ -0.53
SF1-201ENST00000227503 Q56UQ5 140 aa11.75□□□□□ -0.53
SF1-201ENST00000227503 SSMEM1Q8WWF3 244 aa11.75□□□□□ -0.53
SF1-201ENST00000227503 PRR14LQ5THK1 2151 aa11.75□□□□□ -0.53
SF1-201ENST00000227503 TET2Q6N021 2002 aaPredicted RBP11.75□□□□□ -0.53
SF1-201ENST00000227503 SYNGR4O95473 234 aa11.75□□□□□ -0.53
SF1-201ENST00000227503 TOMM40O96008 361 aa11.75□□□□□ -0.53
SF1-201ENST00000227503 CELA3AP09093 270 aa11.75□□□□□ -0.53
SF1-201ENST00000227503 SRYQ05066 204 aa11.75□□□□□ -0.53
SF1-201ENST00000227503 DCAF12Q5T6F0 453 aa11.75□□□□□ -0.53
SF1-201ENST00000227503 MIC13Q5XKP0 118 aa11.75□□□□□ -0.53
SF1-201ENST00000227503 MRPL21Q7Z2W9 205 aaKnown RBP11.75□□□□□ -0.53
SF1-201ENST00000227503 TUSC5Q8IXB3 177 aa11.75□□□□□ -0.53
SF1-201ENST00000227503 KCNIP2Q9NS61 270 aa11.75□□□□□ -0.53
SF1-201ENST00000227503 DLL3Q9NYJ7 618 aa11.75□□□□□ -0.53
SF1-201ENST00000227503 DSPP15924 2871 aaKnown RBP11.75□□□□□ -0.53
SF1-201ENST00000227503 CER1O95813 267 aa11.74□□□□□ -0.53
SF1-201ENST00000227503 CA1P00915 261 aaPredicted RBP11.74□□□□□ -0.53
SF1-201ENST00000227503 CA2P00918 260 aa11.74□□□□□ -0.53
SF1-201ENST00000227503 C5orf30Q96GV9 206 aa11.74□□□□□ -0.53
SF1-201ENST00000227503 CLEC7AQ9BXN2 247 aa11.74□□□□□ -0.53
SF1-201ENST00000227503 LIN7CQ9NUP9 197 aaKnown RBP11.74□□□□□ -0.53
SF1-201ENST00000227503 BET1LQ9NYM9 111 aa11.74□□□□□ -0.53
SF1-201ENST00000227503 FOXH1O75593 365 aa11.74□□□□□ -0.53
SF1-201ENST00000227503 CLDN18P56856 261 aa11.74□□□□□ -0.53
SF1-201ENST00000227503 C6orf15Q6UXA7 325 aaPredicted RBP11.74□□□□□ -0.53
SF1-201ENST00000227503 KCNS1Q96KK3 526 aa11.74□□□□□ -0.53
SF1-201ENST00000227503 STRADBQ9C0K7 418 aa11.74□□□□□ -0.53
SF1-201ENST00000227503 PRO3102Q9H379 93 aa11.74□□□□□ -0.53
SF1-201ENST00000227503 GP6Q9HCN6 339 aa11.74□□□□□ -0.53
SF1-201ENST00000227503 HSPB7Q9UBY9 170 aa11.74□□□□□ -0.53
SF1-201ENST00000227503 TRAPPC2LQ9UL33 140 aa11.74□□□□□ -0.53
SF1-201ENST00000227503 BOKQ9UMX3 212 aaPredicted RBP11.74□□□□□ -0.53
SF1-201ENST00000227503 TNRC6AQ8NDV7 1962 aaKnown RBP11.74□□□□□ -0.53
SF1-201ENST00000227503 IGHV2-70DA0A0C4DH43 119 aa11.73□□□□□ -0.53
SF1-201ENST00000227503 C17orf98A8MV24 154 aa11.73□□□□□ -0.53
SF1-201ENST00000227503 TFF1P04155 84 aa11.73□□□□□ -0.53
SF1-201ENST00000227503 CEBPDP49716 269 aaPredicted RBP11.73□□□□□ -0.53
SF1-201ENST00000227503 Q0VG73 95 aa11.73□□□□□ -0.53
SF1-201ENST00000227503 TRIP6Q15654 476 aaKnown RBP11.73□□□□□ -0.53
SF1-201ENST00000227503 NEUROG1Q92886 237 aa11.73□□□□□ -0.53
SF1-201ENST00000227503 PLPPR2Q96GM1 343 aa11.73□□□□□ -0.53
SF1-201ENST00000227503 LRRC30A6NM36 301 aa11.73□□□□□ -0.53
SF1-201ENST00000227503 NEURL1O76050 574 aa11.73□□□□□ -0.53
SF1-201ENST00000227503 RPEL1Q2QD12 228 aa11.73□□□□□ -0.53
SF1-201ENST00000227503 ZNF324O75467 553 aaPredicted RBP11.73□□□□□ -0.53
SF1-201ENST00000227503 UBALD2Q8IYN6 164 aa11.73□□□□□ -0.53
SF1-201ENST00000227503 KIR3DL3Q8N743 410 aa11.73□□□□□ -0.53
SF1-201ENST00000227503 POM121L2Q96KW2 1035 aa11.73□□□□□ -0.53
SF1-201ENST00000227503 OR2D2Q9H210 308 aa11.73□□□□□ -0.53
SF1-201ENST00000227503 COL27A1Q8IZC6 1860 aaPredicted RBP11.72□□□□□ -0.53
SF1-201ENST00000227503 ZFHX4Q86UP3 3567 aa11.72□□□□□ -0.53
SF1-201ENST00000227503 TNFSF4P23510 183 aa11.72□□□□□ -0.53
SF1-201ENST00000227503 SPATA12Q7Z6I5 190 aa11.72□□□□□ -0.53
SF1-201ENST00000227503 TSKUQ8WUA8 353 aa11.72□□□□□ -0.53
SF1-201ENST00000227503 HES7Q9BYE0 225 aa11.72□□□□□ -0.53
SF1-201ENST00000227503 SLC35D1Q9NTN3 355 aa11.72□□□□□ -0.53
SF1-201ENST00000227503 LOXL2Q9Y4K0 774 aa11.72□□□□□ -0.53
SF1-201ENST00000227503 DCHS1Q96JQ0 3298 aa11.72□□□□□ -0.53
SF1-201ENST00000227503 TRBV6-6A0A0A6YYG2 114 aa11.72□□□□□ -0.53
SF1-201ENST00000227503 OR2T8A6NH00 312 aa11.72□□□□□ -0.53
SF1-201ENST00000227503 IGLL1P15814 213 aa11.72□□□□□ -0.53
SF1-201ENST00000227503 PRRX1P54821 245 aa11.72□□□□□ -0.53
SF1-201ENST00000227503 VASH2Q86V25 355 aa11.72□□□□□ -0.53
SF1-201ENST00000227503 NHLRC2Q8NBF2 726 aa11.72□□□□□ -0.53
SF1-201ENST00000227503 FAM173AQ9BQD7 235 aa11.72□□□□□ -0.53
SF1-201ENST00000227503 BMPR1BO00238 502 aa11.71□□□□□ -0.53
SF1-201ENST00000227503 DEGS1O15121 323 aa11.71□□□□□ -0.53
SF1-201ENST00000227503 MPV17L2Q567V2 206 aa11.71□□□□□ -0.53
SF1-201ENST00000227503 SPATA46Q5T0L3 261 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms