RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 IBA57Q5T440 356 aaKnown RBP9.78□□□□□ -0.84
NOD1-201ENST00000222823 DYNLRB2Q8TF09 96 aa9.78□□□□□ -0.84
NOD1-201ENST00000222823 LOC102723996A0A087X1L8 192 aa9.78□□□□□ -0.84
NOD1-201ENST00000222823 MT-ND6P03923 174 aa9.78□□□□□ -0.84
NOD1-201ENST00000222823 TRGC2P03986 189 aa9.78□□□□□ -0.84
NOD1-201ENST00000222823 DANCRP0C864 163 aa9.78□□□□□ -0.84
NOD1-201ENST00000222823 GALNT14Q96FL9 552 aa9.78□□□□□ -0.84
NOD1-201ENST00000222823 MEGF10Q96KG7 1140 aa9.78□□□□□ -0.84
NOD1-201ENST00000222823 SH3BGRL3Q9H299 93 aa9.78□□□□□ -0.84
NOD1-201ENST00000222823 PI4KAP42356 2102 aa9.77□□□□□ -0.84
NOD1-201ENST00000222823 CLPSP04118 112 aa9.77□□□□□ -0.85
NOD1-201ENST00000222823 PSG7Q13046 419 aa9.77□□□□□ -0.85
NOD1-201ENST00000222823 TMEM78Q5T7P6 136 aa9.77□□□□□ -0.85
NOD1-201ENST00000222823 EIF4E3Q8N5X7 224 aaKnown RBP9.77□□□□□ -0.85
NOD1-201ENST00000222823 RBM14Q96PK6 669 aaKnown RBP9.77□□□□□ -0.85
NOD1-201ENST00000222823 C1QTNF5Q9BXJ0 243 aa9.77□□□□□ -0.85
NOD1-201ENST00000222823 TRBV23-1A0A0A0MS06 115 aa9.77□□□□□ -0.85
NOD1-201ENST00000222823 B9A039 149 aa9.77□□□□□ -0.85
NOD1-201ENST00000222823 SCGB1D4Q6XE38 83 aa9.77□□□□□ -0.85
NOD1-201ENST00000222823 C17orf82Q86X59 251 aaPredicted RBP9.77□□□□□ -0.85
NOD1-201ENST00000222823 MRPL37Q9BZE1 423 aaKnown RBP9.77□□□□□ -0.85
NOD1-201ENST00000222823 LRRK1Q38SD2 2015 aa9.77□□□□□ -0.85
NOD1-201ENST00000222823 LIPFP07098 398 aa9.77□□□□□ -0.85
NOD1-201ENST00000222823 MGPP08493 103 aa9.77□□□□□ -0.85
NOD1-201ENST00000222823 ID1P41134 155 aa9.77□□□□□ -0.85
NOD1-201ENST00000222823 C2orf68Q2NKX9 166 aa9.77□□□□□ -0.85
NOD1-201ENST00000222823 OR51G1Q8NGK1 321 aa9.77□□□□□ -0.85
NOD1-201ENST00000222823 EAF1Q96JC9 268 aaPredicted RBP9.77□□□□□ -0.85
NOD1-201ENST00000222823 CLEC7AQ9BXN2 247 aa9.77□□□□□ -0.85
NOD1-201ENST00000222823 RALYQ9UKM9 306 aaKnown RBP9.77□□□□□ -0.85
NOD1-201ENST00000222823 USF3Q68DE3 2245 aa9.77□□□□□ -0.85
NOD1-201ENST00000222823 ZNF98A6NK75 572 aa9.76□□□□□ -0.85
NOD1-201ENST00000222823 CEACAM1P13688 526 aa9.76□□□□□ -0.85
NOD1-201ENST00000222823 MFAP4P55083 255 aa9.76□□□□□ -0.85
NOD1-201ENST00000222823 VN1R17PQ8TDU5 208 aa9.76□□□□□ -0.85
NOD1-201ENST00000222823 SLC25A28Q96A46 364 aa9.76□□□□□ -0.85
NOD1-201ENST00000222823 RPRMQ9NS64 109 aa9.76□□□□□ -0.85
NOD1-201ENST00000222823 PAM16Q9Y3D7 125 aa9.76□□□□□ -0.85
NOD1-201ENST00000222823 FCGR2BP31994 310 aaPredicted RBP9.76□□□□□ -0.85
NOD1-201ENST00000222823 LINC01560Q8TB33 94 aa9.76□□□□□ -0.85
NOD1-201ENST00000222823 NPIPB3Q92617 1050 aa9.76□□□□□ -0.85
NOD1-201ENST00000222823 HSPB8Q9UJY1 196 aa9.76□□□□□ -0.85
NOD1-201ENST00000222823 LTBP2Q14767 1821 aa9.76□□□□□ -0.85
NOD1-201ENST00000222823 MSGN1A6NI15 193 aa9.76□□□□□ -0.85
NOD1-201ENST00000222823 CBY3A6NI87 242 aa9.76□□□□□ -0.85
NOD1-201ENST00000222823 IGHV3-48P01763 117 aa9.76□□□□□ -0.85
NOD1-201ENST00000222823 UCP1P25874 307 aa9.76□□□□□ -0.85
NOD1-201ENST00000222823 PPOXP50336 477 aa9.76□□□□□ -0.85
NOD1-201ENST00000222823 DHRS11Q6UWP2 260 aa9.76□□□□□ -0.85
NOD1-201ENST00000222823 ACP7Q6ZNF0 438 aa9.76□□□□□ -0.85
NOD1-201ENST00000222823 C1orf162Q8NEQ5 155 aaPredicted RBP9.76□□□□□ -0.85
NOD1-201ENST00000222823 OR8A1Q8NGG7 326 aa9.76□□□□□ -0.85
NOD1-201ENST00000222823 RARRES2Q99969 163 aa9.76□□□□□ -0.85
NOD1-201ENST00000222823 ELOVL5Q9NYP7 299 aa9.76□□□□□ -0.85
NOD1-201ENST00000222823 HSPB7Q9UBY9 170 aa9.76□□□□□ -0.85
NOD1-201ENST00000222823 DOCK7Q96N67 2140 aa9.76□□□□□ -0.85
NOD1-201ENST00000222823 ACSF3Q4G176 576 aaPredicted RBP9.76□□□□□ -0.85
NOD1-201ENST00000222823 STPG3Q8N7X2 389 aa9.76□□□□□ -0.85
NOD1-201ENST00000222823 LOC105371242A0A075B767 164 aa9.75□□□□□ -0.85
NOD1-201ENST00000222823 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.75□□□□□ -0.85
NOD1-201ENST00000222823 ZCCHC14Q8WYQ9 949 aaKnown RBP9.75□□□□□ -0.85
NOD1-201ENST00000222823 MRPS18CQ9Y3D5 142 aaKnown RBP9.75□□□□□ -0.85
NOD1-201ENST00000222823 PROB1E7EW31 1015 aa9.75□□□□□ -0.85
NOD1-201ENST00000222823 COX6B1P14854 86 aa9.75□□□□□ -0.85
NOD1-201ENST00000222823 NUBP1P53384 320 aa9.75□□□□□ -0.85
NOD1-201ENST00000222823 PNKDQ8N490 385 aa9.75□□□□□ -0.85
NOD1-201ENST00000222823 GATAD1Q8WUU5 269 aa9.75□□□□□ -0.85
NOD1-201ENST00000222823 C16orf92Q96LL3 132 aa9.75□□□□□ -0.85
NOD1-201ENST00000222823 METTL26Q96S19 204 aa9.75□□□□□ -0.85
NOD1-201ENST00000222823 NABP2Q9BQ15 211 aa9.75□□□□□ -0.85
NOD1-201ENST00000222823 MESP1Q9BRJ9 268 aa9.75□□□□□ -0.85
NOD1-201ENST00000222823 SHANK1Q9Y566 2161 aa9.75□□□□□ -0.85
NOD1-201ENST00000222823 A0A1W2PS18 150 aa9.75□□□□□ -0.85
NOD1-201ENST00000222823 TMEM189A5PLL7 270 aa9.75□□□□□ -0.85
NOD1-201ENST00000222823 C9orf172C9J069 976 aa9.75□□□□□ -0.85
NOD1-201ENST00000222823 REG1AP05451 166 aa9.75□□□□□ -0.85
NOD1-201ENST00000222823 ARL14EPLP0DKL9 152 aa9.75□□□□□ -0.85
NOD1-201ENST00000222823 APOBEC3AP31941 199 aaPredicted RBP9.75□□□□□ -0.85
NOD1-201ENST00000222823 TFPI2P48307 235 aa9.75□□□□□ -0.85
NOD1-201ENST00000222823 ATP5J2P56134 94 aa9.75□□□□□ -0.85
NOD1-201ENST00000222823 GFRA1P56159 465 aa9.75□□□□□ -0.85
NOD1-201ENST00000222823 ATP5IP56385 69 aaPredicted RBP9.75□□□□□ -0.85
NOD1-201ENST00000222823 CFHR1Q03591 330 aa9.75□□□□□ -0.85
NOD1-201ENST00000222823 KLRB1Q12918 225 aa9.75□□□□□ -0.85
NOD1-201ENST00000222823 RPL39P5Q59GN2 51 aa9.75□□□□□ -0.85
NOD1-201ENST00000222823 TMEM105Q8N8V8 129 aa9.75□□□□□ -0.85
NOD1-201ENST00000222823 ZNF383Q8NA42 475 aa9.75□□□□□ -0.85
NOD1-201ENST00000222823 SPSB4Q96A44 273 aa9.75□□□□□ -0.85
NOD1-201ENST00000222823 CLDN16Q9Y5I7 305 aa9.75□□□□□ -0.85
NOD1-201ENST00000222823 CRYBB3P26998 211 aa9.74□□□□□ -0.85
NOD1-201ENST00000222823 FAM201AQ5SY85 155 aa9.74□□□□□ -0.85
NOD1-201ENST00000222823 MYOZ3Q8TDC0 251 aa9.74□□□□□ -0.85
NOD1-201ENST00000222823 ABHD17AQ96GS6 310 aa9.74□□□□□ -0.85
NOD1-201ENST00000222823 PLSCR2Q9NRY7 297 aa9.74□□□□□ -0.85
NOD1-201ENST00000222823 HEATR5AQ86XA9 2040 aa9.74□□□□□ -0.85
NOD1-201ENST00000222823 KIR2DL2P43627 348 aaPredicted RBP9.74□□□□□ -0.85
NOD1-201ENST00000222823 HERVK_113P61574 105 aa9.74□□□□□ -0.85
NOD1-201ENST00000222823 ZFP36L1Q07352 338 aaKnown RBP9.74□□□□□ -0.85
NOD1-201ENST00000222823 ZNF146Q15072 292 aa9.74□□□□□ -0.85
NOD1-201ENST00000222823 SMUG1Q53HV7 270 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms