RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 IGHV3-35A0A0C4DH35 117 aa12.62□□□□□ -0.39
SPTLC2-201ENST00000216484 KLK13Q9UKR3 277 aa12.62□□□□□ -0.39
SPTLC2-201ENST00000216484 CYSLTR1Q9Y271 337 aa12.62□□□□□ -0.39
SPTLC2-201ENST00000216484 PARP14Q460N5 1801 aa12.62□□□□□ -0.39
SPTLC2-201ENST00000216484 P2RY4P51582 365 aa12.62□□□□□ -0.39
SPTLC2-201ENST00000216484 PEAR1Q5VY43 1037 aaPredicted RBP12.62□□□□□ -0.39
SPTLC2-201ENST00000216484 TET1Q8NFU7 2136 aa12.62□□□□□ -0.39
SPTLC2-201ENST00000216484 ORAOV1Q8WV07 137 aa12.62□□□□□ -0.39
SPTLC2-201ENST00000216484 H0YL77 283 aa12.62□□□□□ -0.39
SPTLC2-201ENST00000216484 CD69Q07108 199 aa12.62□□□□□ -0.39
SPTLC2-201ENST00000216484 CNOT1A5YKK6 2376 aaKnown RBP12.62□□□□□ -0.39
SPTLC2-201ENST00000216484 IGHV3-23P01764 117 aa12.62□□□□□ -0.39
SPTLC2-201ENST00000216484 TAF15Q92804 592 aaKnown RBP eCLIP12.62□□□□□ -0.39
SPTLC2-201ENST00000216484 CHST5Q9GZS9 411 aa12.62□□□□□ -0.39
SPTLC2-201ENST00000216484 DSCAML1Q8TD84 2053 aa12.62□□□□□ -0.39
SPTLC2-201ENST00000216484 SPTY2D1-AS1A0A0U1RR47 76 aa12.61□□□□□ -0.39
SPTLC2-201ENST00000216484 RICTORQ6R327 1708 aa12.61□□□□□ -0.39
SPTLC2-201ENST00000216484 IGHV3-49A0A0A0MS15 119 aa12.61□□□□□ -0.39
SPTLC2-201ENST00000216484 FOXA3P55318 350 aaPredicted RBP12.61□□□□□ -0.39
SPTLC2-201ENST00000216484 PGPEP1LA6NFU8 196 aa12.61□□□□□ -0.39
SPTLC2-201ENST00000216484 SLC17A3O00476 420 aa12.61□□□□□ -0.39
SPTLC2-201ENST00000216484 SHISA5Q8N114 240 aa12.61□□□□□ -0.39
SPTLC2-201ENST00000216484 TM4SF4P48230 202 aa12.61□□□□□ -0.39
SPTLC2-201ENST00000216484 J3QT63 122 aa12.61□□□□□ -0.39
SPTLC2-201ENST00000216484 INO80CQ6PI98 192 aaPredicted RBP12.61□□□□□ -0.39
SPTLC2-201ENST00000216484 CCL19Q99731 98 aa12.61□□□□□ -0.39
SPTLC2-201ENST00000216484 SCTP09683 121 aa12.61□□□□□ -0.39
SPTLC2-201ENST00000216484 SFTPCP11686 197 aa12.61□□□□□ -0.39
SPTLC2-201ENST00000216484 HOXD3P31249 432 aaPredicted RBP12.61□□□□□ -0.39
SPTLC2-201ENST00000216484 GATD1Q8NB37 220 aa12.61□□□□□ -0.39
SPTLC2-201ENST00000216484 TRAV2A0A0B4J234 112 aa12.6□□□□□ -0.39
SPTLC2-201ENST00000216484 LDLRAD1Q5T700 205 aa12.6□□□□□ -0.39
SPTLC2-201ENST00000216484 UCN2Q96RP3 112 aa12.6□□□□□ -0.39
SPTLC2-201ENST00000216484 LINC01587Q99440 93 aa12.6□□□□□ -0.39
SPTLC2-201ENST00000216484 V9GYH0 126 aa12.6□□□□□ -0.39
SPTLC2-201ENST00000216484 LIPT2A6NK58 231 aa12.6□□□□□ -0.39
SPTLC2-201ENST00000216484 GLIPR1P48060 266 aa12.6□□□□□ -0.39
SPTLC2-201ENST00000216484 OR10J3Q5JRS4 329 aa12.6□□□□□ -0.39
SPTLC2-201ENST00000216484 SSC4DQ8WTU2 575 aa12.6□□□□□ -0.39
SPTLC2-201ENST00000216484 MS4A6AQ9H2W1 248 aa12.6□□□□□ -0.39
SPTLC2-201ENST00000216484 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.6□□□□□ -0.39
SPTLC2-201ENST00000216484 SEMA5BQ9P283 1151 aa12.6□□□□□ -0.39
SPTLC2-201ENST00000216484 MED13Q9UHV7 2174 aa12.6□□□□□ -0.39
SPTLC2-201ENST00000216484 C8orf88P0DMB2 117 aa12.6□□□□□ -0.39
SPTLC2-201ENST00000216484 SDF2L1Q9HCN8 221 aa12.6□□□□□ -0.39
SPTLC2-201ENST00000216484 LEPP41159 167 aa12.6□□□□□ -0.39
SPTLC2-201ENST00000216484 LHX9Q9NQ69 397 aa12.6□□□□□ -0.39
SPTLC2-201ENST00000216484 WNK1Q9H4A3 2382 aa12.6□□□□□ -0.39
SPTLC2-201ENST00000216484 A0A1B0GTL3 188 aa12.6□□□□□ -0.39
SPTLC2-201ENST00000216484 A0A1W2PP11 408 aa12.6□□□□□ -0.39
SPTLC2-201ENST00000216484 C1orf185Q5T7R7 199 aa12.6□□□□□ -0.39
SPTLC2-201ENST00000216484 LHFPL4Q7Z7J7 247 aa12.6□□□□□ -0.39
SPTLC2-201ENST00000216484 GCM2O75603 506 aaPredicted RBP12.59□□□□□ -0.39
SPTLC2-201ENST00000216484 C1orf210Q8IVY1 113 aa12.59□□□□□ -0.39
SPTLC2-201ENST00000216484 CALYQ9NYX4 217 aa12.59□□□□□ -0.39
SPTLC2-201ENST00000216484 ASIPP42127 132 aa12.59□□□□□ -0.39
SPTLC2-201ENST00000216484 GAGE2EQ4V326 116 aa12.59□□□□□ -0.39
SPTLC2-201ENST00000216484 RASL10BQ96S79 203 aa12.59□□□□□ -0.39
SPTLC2-201ENST00000216484 GAGE2DQ9UEU5 116 aa12.59□□□□□ -0.39
SPTLC2-201ENST00000216484 TRAV8-1A0A0A6YYK1 113 aa12.59□□□□□ -0.39
SPTLC2-201ENST00000216484 H3BUT2 72 aa12.59□□□□□ -0.39
SPTLC2-201ENST00000216484 LINC01565O15544 149 aa12.59□□□□□ -0.39
SPTLC2-201ENST00000216484 TXNDC17Q9BRA2 123 aa12.59□□□□□ -0.39
SPTLC2-201ENST00000216484 KLF4O43474 513 aa12.59□□□□□ -0.39
SPTLC2-201ENST00000216484 CT62P0C5K7 136 aa12.59□□□□□ -0.39
SPTLC2-201ENST00000216484 NPC2P61916 151 aa12.59□□□□□ -0.39
SPTLC2-201ENST00000216484 OGG1O15527 345 aa12.59□□□□□ -0.39
SPTLC2-201ENST00000216484 CA11O75493 328 aa12.59□□□□□ -0.39
SPTLC2-201ENST00000216484 ZNF585BQ52M93 769 aa12.59□□□□□ -0.39
SPTLC2-201ENST00000216484 TRAV24A0A0B4J272 114 aa12.59□□□□□ -0.39
SPTLC2-201ENST00000216484 LEAP2Q969E1 77 aa12.59□□□□□ -0.39
SPTLC2-201ENST00000216484 CISD1Q9NZ45 108 aaKnown RBP12.59□□□□□ -0.39
SPTLC2-201ENST00000216484 LAMTOR3Q9UHA4 124 aa12.59□□□□□ -0.39
SPTLC2-201ENST00000216484 MMD2Q8IY49 270 aa12.58□□□□□ -0.39
SPTLC2-201ENST00000216484 TP53I13Q8NBR0 393 aaPredicted RBP12.58□□□□□ -0.39
SPTLC2-201ENST00000216484 NAPSAO96009 420 aa12.58□□□□□ -0.4
SPTLC2-201ENST00000216484 LGALS1P09382 135 aaKnown RBP12.58□□□□□ -0.4
SPTLC2-201ENST00000216484 PLNP26678 52 aa12.58□□□□□ -0.4
SPTLC2-201ENST00000216484 FAM19A2Q8N3H0 131 aa12.58□□□□□ -0.4
SPTLC2-201ENST00000216484 COQ2Q96H96 371 aa12.58□□□□□ -0.4
SPTLC2-201ENST00000216484 GPHA2Q96T91 129 aa12.58□□□□□ -0.4
SPTLC2-201ENST00000216484 NHP2Q9NX24 153 aaKnown RBP12.58□□□□□ -0.4
SPTLC2-201ENST00000216484 IGHV3-64A0A075B6Q5 118 aa12.58□□□□□ -0.4
SPTLC2-201ENST00000216484 IGHV3OR16-13A0A075B7E8 117 aa12.58□□□□□ -0.4
SPTLC2-201ENST00000216484 IGHV3-74A0A0B4J1X5 117 aa12.58□□□□□ -0.4
SPTLC2-201ENST00000216484 ICAM4Q14773 271 aa12.58□□□□□ -0.4
SPTLC2-201ENST00000216484 SF3B5Q9BWJ5 86 aaKnown RBP12.58□□□□□ -0.4
SPTLC2-201ENST00000216484 TMEM74BQ9NUR3 256 aa12.58□□□□□ -0.4
SPTLC2-201ENST00000216484 CXCL2P19875 107 aa12.58□□□□□ -0.4
SPTLC2-201ENST00000216484 DMKNQ6E0U4 476 aaPredicted RBP12.58□□□□□ -0.4
SPTLC2-201ENST00000216484 VKORC1Q9BQB6 163 aa12.58□□□□□ -0.4
SPTLC2-201ENST00000216484 TSPAN7P41732 249 aa12.58□□□□□ -0.4
SPTLC2-201ENST00000216484 UNC119Q13432 240 aa12.58□□□□□ -0.4
SPTLC2-201ENST00000216484 TMEM86BQ8N661 226 aa12.58□□□□□ -0.4
SPTLC2-201ENST00000216484 ROS1P08922 2347 aa12.58□□□□□ -0.4
SPTLC2-201ENST00000216484 IGHV3OR16-10A0A075B7F0 116 aa12.58□□□□□ -0.4
SPTLC2-201ENST00000216484 NTN1O95631 604 aa12.57□□□□□ -0.4
SPTLC2-201ENST00000216484 FBXW9Q5XUX1 488 aa12.57□□□□□ -0.4
SPTLC2-201ENST00000216484 CD300LDQ6UXZ3 194 aa12.57□□□□□ -0.4
SPTLC2-201ENST00000216484 Q6ZS52 159 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms