RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 ZNF137PP52743 207 aa7.53□□□□□ -1.2
HDAC9-229ENST00000622668 C3orf36Q3SXR2 165 aa7.53□□□□□ -1.2
HDAC9-229ENST00000622668 PNRC2Q9NPJ4 139 aaKnown RBP7.53□□□□□ -1.2
HDAC9-229ENST00000622668 FBXL7Q9UJT9 491 aa7.53□□□□□ -1.2
HDAC9-229ENST00000622668 MOB4Q9Y3A3 225 aa7.53□□□□□ -1.2
HDAC9-229ENST00000622668 TRAV24A0A0B4J272 114 aa7.53□□□□□ -1.2
HDAC9-229ENST00000622668 UNC119Q13432 240 aa7.53□□□□□ -1.2
HDAC9-229ENST00000622668 CLEC18BQ6UXF7 455 aa7.53□□□□□ -1.2
HDAC9-229ENST00000622668 SLC24A4Q8NFF2 622 aa7.53□□□□□ -1.2
HDAC9-229ENST00000622668 YIPF5Q969M3 257 aa7.53□□□□□ -1.2
HDAC9-229ENST00000622668 IGKV1-12A0A0C4DH73 117 aa7.53□□□□□ -1.2
HDAC9-229ENST00000622668 C10orf142B7Z368 130 aa7.53□□□□□ -1.2
HDAC9-229ENST00000622668 M0R1W7 72 aa7.53□□□□□ -1.2
HDAC9-229ENST00000622668 S1PR2O95136 353 aa7.53□□□□□ -1.2
HDAC9-229ENST00000622668 DUS4LO95620 317 aaKnown RBP7.53□□□□□ -1.2
HDAC9-229ENST00000622668 IGKV1D-12P01611 117 aa7.53□□□□□ -1.2
HDAC9-229ENST00000622668 RND2P52198 227 aa7.53□□□□□ -1.2
HDAC9-229ENST00000622668 BLOC1S1P78537 153 aa7.53□□□□□ -1.2
HDAC9-229ENST00000622668 FLI1Q01543 452 aaPredicted RBP7.53□□□□□ -1.2
HDAC9-229ENST00000622668 EXOSC2Q13868 293 aaKnown RBP7.53□□□□□ -1.2
HDAC9-229ENST00000622668 TMEM182Q6ZP80 229 aaPredicted RBP7.53□□□□□ -1.2
HDAC9-229ENST00000622668 FGFRL1Q8N441 504 aa7.53□□□□□ -1.2
HDAC9-229ENST00000622668 C17orf50Q8WW18 174 aa7.53□□□□□ -1.2
HDAC9-229ENST00000622668 SPSB4Q96A44 273 aa7.53□□□□□ -1.2
HDAC9-229ENST00000622668 GAFA1Q96PS6 74 aa7.53□□□□□ -1.2
HDAC9-229ENST00000622668 CENPEQ02224 2701 aa7.53□□□□□ -1.2
HDAC9-229ENST00000622668 PPT1P50897 306 aa7.52□□□□□ -1.2
HDAC9-229ENST00000622668 SLC16A13Q7RTY0 426 aa7.52□□□□□ -1.2
HDAC9-229ENST00000622668 OR52M1Q8NGK5 317 aa7.52□□□□□ -1.2
HDAC9-229ENST00000622668 OR4X1Q8NH49 305 aa7.52□□□□□ -1.2
HDAC9-229ENST00000622668 BSCL2Q96G97 398 aaPredicted RBP7.52□□□□□ -1.2
HDAC9-229ENST00000622668 PLEKHA2Q9HB19 425 aa7.52□□□□□ -1.2
HDAC9-229ENST00000622668 MED12LQ86YW9 2145 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 IGLV3-9A0A075B6K5 115 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 IGKV1D-17A0A075B6S4 117 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 IGHV1-69DA0A0B4J2H0 117 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 A0A0D9SG52 128 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 J3QLI3 93 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 GSTZ1O43708 216 aaPredicted RBP7.52□□□□□ -1.21
HDAC9-229ENST00000622668 IGHV1-69P01742 117 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 SLC25A4P12235 298 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 GPR183P32249 361 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 ID1P41134 155 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 ASAH1Q13510 395 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 IZUMO4Q1ZYL8 232 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 SSX7Q7RTT5 188 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 PDPNQ86YL7 162 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 SIGLECL1Q8N7X8 197 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 OSR1Q8TAX0 266 aaPredicted RBP7.52□□□□□ -1.21
HDAC9-229ENST00000622668 MALSU1Q96EH3 234 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 ACTR3CQ9C0K3 210 aaPredicted RBP7.52□□□□□ -1.21
HDAC9-229ENST00000622668 C5orf42Q9H799 3197 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 SAA2-SAA4A0A096LPE2 208 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 ANKRD20A5PA0PJZ0 165 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 C9orf170A2RU37 121 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 HBE1P02100 147 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 SAA2P0DJI9 122 aaPredicted RBP7.52□□□□□ -1.21
HDAC9-229ENST00000622668 MINOS1Q5TGZ0 78 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 EBLN2Q6P2I7 272 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 BIVMQ86UB2 503 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 OR5C1Q8NGR4 320 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 LSM10Q969L4 123 aaKnown RBP7.52□□□□□ -1.21
HDAC9-229ENST00000622668 ARPC5LQ9BPX5 153 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 RANGRFQ9HD47 186 aaPredicted RBP7.52□□□□□ -1.21
HDAC9-229ENST00000622668 UBQLN2Q9UHD9 624 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 MINOS1-NBL1R4GNA1 71 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 IGHV2-70DA0A0C4DH43 119 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 CORTO00230 105 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 PGLYRP1O75594 196 aaPredicted RBP7.52□□□□□ -1.21
HDAC9-229ENST00000622668 CCL1P22362 96 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 UBE2G2P60604 165 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 HSPE1P61604 102 aaKnown RBP7.52□□□□□ -1.21
HDAC9-229ENST00000622668 OR5I1Q13606 314 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 GBGT1Q8N5D6 347 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 C10orf105Q8TEF2 133 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 MITD1Q8WV92 249 aa7.52□□□□□ -1.21
HDAC9-229ENST00000622668 ZNF436Q9C0F3 470 aaPredicted RBP7.52□□□□□ -1.21
HDAC9-229ENST00000622668 SAP30O75446 220 aa7.51□□□□□ -1.21
HDAC9-229ENST00000622668 IGKV3-20P01619 116 aa7.51□□□□□ -1.21
HDAC9-229ENST00000622668 SPP1P10451 314 aa7.51□□□□□ -1.21
HDAC9-229ENST00000622668 S100PP25815 95 aa7.51□□□□□ -1.21
HDAC9-229ENST00000622668 OTX1P32242 354 aaPredicted RBP7.51□□□□□ -1.21
HDAC9-229ENST00000622668 GALR1P47211 349 aa7.51□□□□□ -1.21
HDAC9-229ENST00000622668 RAB32Q13637 225 aa7.51□□□□□ -1.21
HDAC9-229ENST00000622668 TM4SF20Q53R12 229 aa7.51□□□□□ -1.21
HDAC9-229ENST00000622668 PRR27Q6MZM9 219 aa7.51□□□□□ -1.21
HDAC9-229ENST00000622668 KLHL30-AS1Q8NEE0 82 aa7.51□□□□□ -1.21
HDAC9-229ENST00000622668 OR1L4Q8NGR5 311 aa7.51□□□□□ -1.21
HDAC9-229ENST00000622668 GNPNAT1Q96EK6 184 aaPredicted RBP7.51□□□□□ -1.21
HDAC9-229ENST00000622668 PSMB3P49720 205 aa7.51□□□□□ -1.21
HDAC9-229ENST00000622668 PXDC1Q5TGL8 231 aa7.51□□□□□ -1.21
HDAC9-229ENST00000622668 CLEC19AQ6UXS0 136 aa7.51□□□□□ -1.21
HDAC9-229ENST00000622668 OR2C3Q8N628 320 aa7.51□□□□□ -1.21
HDAC9-229ENST00000622668 MFNGO00587 321 aa7.51□□□□□ -1.21
HDAC9-229ENST00000622668 ZNF146Q15072 292 aa7.51□□□□□ -1.21
HDAC9-229ENST00000622668 MORN2Q502X0 79 aa7.51□□□□□ -1.21
HDAC9-229ENST00000622668 FOXL2NBQ6ZUU3 175 aa7.51□□□□□ -1.21
HDAC9-229ENST00000622668 MRPL30Q8TCC3 161 aaKnown RBP7.51□□□□□ -1.21
HDAC9-229ENST00000622668 POM121CA8CG34 1229 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 SMLR1H3BR10 107 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms