RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 NAT8BQ9UHF3 227 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 JPT1Q9UK76 154 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 PRNDQ9UKY0 176 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 TCF19Q9Y242 345 aa7.3□□□□□ -1.24
LIG4-204ENST00000611712 LRRC10Q5BKY1 277 aa7.29□□□□□ -1.24
LIG4-204ENST00000611712 WDR82Q6UXN9 313 aa7.29□□□□□ -1.24
LIG4-204ENST00000611712 Q6ZSR3 168 aa7.29□□□□□ -1.24
LIG4-204ENST00000611712 SIGLECL1Q8N7X8 197 aa7.29□□□□□ -1.24
LIG4-204ENST00000611712 FKBP11Q9NYL4 201 aa7.29□□□□□ -1.24
LIG4-204ENST00000611712 PCNX2A6NKB5 2137 aa7.29□□□□□ -1.24
LIG4-204ENST00000611712 FAM201AQ5SY85 155 aa7.29□□□□□ -1.24
LIG4-204ENST00000611712 ACSM6Q6P461 480 aa7.29□□□□□ -1.24
LIG4-204ENST00000611712 MBD3L1Q8WWY6 194 aa7.29□□□□□ -1.24
LIG4-204ENST00000611712 OR51B2Q9Y5P1 312 aa7.29□□□□□ -1.24
LIG4-204ENST00000611712 LAMA3Q16787 3333 aa7.29□□□□□ -1.24
LIG4-204ENST00000611712 IGHV2OR16-5A0A0B4J2B6 119 aa7.29□□□□□ -1.24
LIG4-204ENST00000611712 KIAA1324LA8MWY0 1029 aaPredicted RBP7.29□□□□□ -1.24
LIG4-204ENST00000611712 SS18L1O75177 396 aaPredicted RBP7.29□□□□□ -1.24
LIG4-204ENST00000611712 ARL14EPLP0DKL9 152 aa7.29□□□□□ -1.24
LIG4-204ENST00000611712 TPPP2P59282 170 aa7.29□□□□□ -1.24
LIG4-204ENST00000611712 BPIFB3P59826 476 aa7.29□□□□□ -1.24
LIG4-204ENST00000611712 ERVFRD-1P60508 538 aa7.29□□□□□ -1.24
LIG4-204ENST00000611712 RPL30P62888 115 aaKnown RBP7.29□□□□□ -1.24
LIG4-204ENST00000611712 ARL16Q0P5N6 197 aa7.29□□□□□ -1.24
LIG4-204ENST00000611712 GFRALQ6UXV0 394 aa7.29□□□□□ -1.24
LIG4-204ENST00000611712 MDS2Q8NDY4 140 aa7.29□□□□□ -1.24
LIG4-204ENST00000611712 BORCS7Q96B45 105 aa7.29□□□□□ -1.24
LIG4-204ENST00000611712 HARBI1Q96MB7 349 aa7.29□□□□□ -1.24
LIG4-204ENST00000611712 GUCD1Q96NT3 240 aa7.29□□□□□ -1.24
LIG4-204ENST00000611712 TECRQ9NZ01 308 aaKnown RBP7.29□□□□□ -1.24
LIG4-204ENST00000611712 APC2O95996 2303 aa7.29□□□□□ -1.24
LIG4-204ENST00000611712 HIST1H2BKO60814 126 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 CNIH1O95406 144 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 HIST1H2BJP06899 126 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 DEFA4P12838 97 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 HIST1H2BOP23527 126 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 HIST1H2BBP33778 126 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 REG1BP48304 166 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 CNN1P51911 297 aaKnown RBP7.28□□□□□ -1.24
LIG4-204ENST00000611712 TCL1AP56279 114 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 HIST1H2BDP58876 126 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 HIST1H2BCP62807 126 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 HIST2H2BEQ16778 126 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.28□□□□□ -1.24
LIG4-204ENST00000611712 TOMM20LQ6UXN7 152 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 SPNS3Q6ZMD2 512 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 OR1P1Q8NH06 330 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 HIST1H2BHQ93079 126 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 HIST1H2BNQ99877 126 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 HIST1H2BMQ99879 126 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 SRD5A3Q9H8P0 318 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 HES4Q9HCC6 221 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 TMEM167BQ9NRX6 74 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 EML5Q05BV3 1969 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 TRAV1-1A0A0B4J248 108 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 PAX9P55771 341 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 RNFT1Q5M7Z0 435 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 DBX2Q6ZNG2 339 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 RPP25LQ8N5L8 163 aaKnown RBP7.28□□□□□ -1.24
LIG4-204ENST00000611712 ZNF586Q9NXT0 402 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 HSPB7Q9UBY9 170 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 CT45A6P0DMU7 189 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 CT45A5P0DMU8 189 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 CT45A7P0DMV0 189 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 CRISP2P16562 243 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 KRTDAPP60985 99 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 HSPE1P61604 102 aaKnown RBP7.28□□□□□ -1.24
LIG4-204ENST00000611712 RPL31P62899 125 aaKnown RBP7.28□□□□□ -1.24
LIG4-204ENST00000611712 UBE2L3P68036 154 aaKnown RBP7.28□□□□□ -1.24
LIG4-204ENST00000611712 VMA21Q3ZAQ7 101 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 ZNF585BQ52M93 769 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 CT45A1Q5HYN5 189 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 CT45A3Q8NHU0 189 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 CMTM2Q8TAZ6 248 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 FAM216AQ8WUB2 273 aa7.28□□□□□ -1.24
LIG4-204ENST00000611712 HELTA6NFD8 242 aa7.27□□□□□ -1.24
LIG4-204ENST00000611712 OR10J4P0C629 311 aa7.27□□□□□ -1.24
LIG4-204ENST00000611712 SRP14P37108 136 aaKnown RBP7.27□□□□□ -1.24
LIG4-204ENST00000611712 PKIAP61925 76 aa7.27□□□□□ -1.24
LIG4-204ENST00000611712 CRIP3Q6Q6R5 217 aa7.27□□□□□ -1.24
LIG4-204ENST00000611712 MEGF10Q96KG7 1140 aa7.27□□□□□ -1.24
LIG4-204ENST00000611712 RNF115Q9Y4L5 304 aa7.27□□□□□ -1.24
LIG4-204ENST00000611712 DMRT1Q9Y5R6 373 aa7.27□□□□□ -1.24
LIG4-204ENST00000611712 LINC00205P59089 165 aa7.27□□□□□ -1.25
LIG4-204ENST00000611712 RPL23P62829 140 aaKnown RBP7.27□□□□□ -1.25
LIG4-204ENST00000611712 RPEL1Q2QD12 228 aa7.27□□□□□ -1.25
LIG4-204ENST00000611712 GCSAMQ8N6F7 178 aa7.27□□□□□ -1.25
LIG4-204ENST00000611712 C1orf162Q8NEQ5 155 aaPredicted RBP7.27□□□□□ -1.25
LIG4-204ENST00000611712 GATAD1Q8WUU5 269 aa7.27□□□□□ -1.25
LIG4-204ENST00000611712 SAP30LQ9HAJ7 183 aa7.27□□□□□ -1.25
LIG4-204ENST00000611712 CHD9Q3L8U1 2897 aa7.27□□□□□ -1.25
LIG4-204ENST00000611712 OR10J1P30954 320 aa7.27□□□□□ -1.25
LIG4-204ENST00000611712 CCKARP32238 428 aa7.27□□□□□ -1.25
LIG4-204ENST00000611712 IER3P46695 156 aa7.27□□□□□ -1.25
LIG4-204ENST00000611712 SUMO1P63165 101 aaKnown RBP7.27□□□□□ -1.25
LIG4-204ENST00000611712 FOXF2Q12947 444 aa7.27□□□□□ -1.25
LIG4-204ENST00000611712 OR51G1Q8NGK1 321 aa7.27□□□□□ -1.25
LIG4-204ENST00000611712 MISP3Q96FF7 219 aa7.27□□□□□ -1.25
LIG4-204ENST00000611712 FGF23Q9GZV9 251 aaPredicted RBP7.27□□□□□ -1.25
LIG4-204ENST00000611712 ZNF71Q9NQZ8 489 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms