RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 SGSHP51688 502 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 RPS4XP62701 263 aaKnown RBP7.45□□□□□ -1.22
COMMD3-215ENST00000602574 Q56UQ5 140 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 MEIG1Q5JSS6 88 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 C1orf100Q5SVJ3 147 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 OR13A1Q8NGR1 328 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 GTSF1Q8WW33 167 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 OR5P2Q8WZ92 322 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 FLYWCH2Q96CP2 140 aaKnown RBP7.45□□□□□ -1.22
COMMD3-215ENST00000602574 ELOVL3Q9HB03 270 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 IL21Q9HBE4 155 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 GOLGA2P5Q9HBQ8 144 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 IL36BQ9NZH7 164 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 KLK14Q9P0G3 267 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 MRPS17Q9Y2R5 130 aaKnown RBP7.45□□□□□ -1.22
COMMD3-215ENST00000602574 SCN5AQ14524 2016 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 A0A0G2JLL6 359 aaPredicted RBP7.45□□□□□ -1.22
COMMD3-215ENST00000602574 A0A1W2PQH9 124 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 H3BMG7 143 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 HMGN4O00479 90 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 KLF7O75840 302 aaPredicted RBP7.45□□□□□ -1.22
COMMD3-215ENST00000602574 PRSS56P0CW18 603 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 G6PCP35575 357 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 SERF2P84101 59 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 PSG4Q00888 419 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 HHEXQ03014 270 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 WFDC2Q14508 124 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 SLC35E4Q6ICL7 350 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 EBLN2Q6P2I7 272 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 TMEM171Q8WVE6 324 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 SOCS4Q8WXH5 440 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 LHX4Q969G2 390 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 TMEM101Q96IK0 257 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 SGK494Q96LW2 274 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 PRO0461Q9UI25 63 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 CES1P1Q9UKY3 287 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 PTRH2Q9Y3E5 179 aaKnown RBP7.45□□□□□ -1.22
COMMD3-215ENST00000602574 LTBP3Q9NS15 1303 aa7.45□□□□□ -1.22
COMMD3-215ENST00000602574 PRSS29PA6NIE9 313 aa7.44□□□□□ -1.22
COMMD3-215ENST00000602574 CRYM-AS1A6NIL9 109 aa7.44□□□□□ -1.22
COMMD3-215ENST00000602574 C9JAW5 83 aa7.44□□□□□ -1.22
COMMD3-215ENST00000602574 SP1P08047 785 aa7.44□□□□□ -1.22
COMMD3-215ENST00000602574 H2BFMP0C1H6 154 aa7.44□□□□□ -1.22
COMMD3-215ENST00000602574 CCL23P55773 120 aa7.44□□□□□ -1.22
COMMD3-215ENST00000602574 OR1D5P58170 312 aa7.44□□□□□ -1.22
COMMD3-215ENST00000602574 MRPL23Q16540 153 aaKnown RBP7.44□□□□□ -1.22
COMMD3-215ENST00000602574 PRR31Q5SQ13 230 aa7.44□□□□□ -1.22
COMMD3-215ENST00000602574 NAA38Q9BRA0 125 aaKnown RBP7.44□□□□□ -1.22
COMMD3-215ENST00000602574 WDR76Q9H967 626 aa7.44□□□□□ -1.22
COMMD3-215ENST00000602574 HIGD1AQ9Y241 93 aa7.44□□□□□ -1.22
COMMD3-215ENST00000602574 OR2W1Q9Y3N9 320 aa7.44□□□□□ -1.22
COMMD3-215ENST00000602574 SCN2AQ99250 2005 aa7.44□□□□□ -1.22
COMMD3-215ENST00000602574 MDFIC2A0A1B0GVS7 189 aa7.44□□□□□ -1.22
COMMD3-215ENST00000602574 SHISA7A6NL88 538 aa7.44□□□□□ -1.22
COMMD3-215ENST00000602574 J3QLI3 93 aa7.44□□□□□ -1.22
COMMD3-215ENST00000602574 IGFBP4P22692 258 aa7.44□□□□□ -1.22
COMMD3-215ENST00000602574 ETDBQ3ZM63 59 aa7.44□□□□□ -1.22
COMMD3-215ENST00000602574 LCN10Q6JVE6 187 aa7.44□□□□□ -1.22
COMMD3-215ENST00000602574 TMEM219Q86XT9 240 aa7.44□□□□□ -1.22
COMMD3-215ENST00000602574 SCGB1C1Q8TD33 95 aa7.44□□□□□ -1.22
COMMD3-215ENST00000602574 IRF7Q92985 503 aa7.44□□□□□ -1.22
COMMD3-215ENST00000602574 LINC01587Q99440 93 aa7.44□□□□□ -1.22
COMMD3-215ENST00000602574 SPANXDQ9BXN6 97 aa7.44□□□□□ -1.22
COMMD3-215ENST00000602574 EMC9Q9Y3B6 208 aa7.44□□□□□ -1.22
COMMD3-215ENST00000602574 VWA8A3KMH1 1905 aa7.44□□□□□ -1.22
COMMD3-215ENST00000602574 SPRY1O43609 319 aaPredicted RBP7.43□□□□□ -1.22
COMMD3-215ENST00000602574 PLXNA2O75051 1894 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 DHRS3O75911 302 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 HLA-DQA1P01909 254 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 GAGE2BQ13066 116 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 KLF5Q13887 457 aaPredicted RBP7.43□□□□□ -1.22
COMMD3-215ENST00000602574 MS4A18Q3C1V0 323 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 GAGE2EQ4V326 116 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 TTC32Q5I0X7 151 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 FAM69BQ5VUD6 431 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 TEPPQ6URK8 271 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 MEX3DQ86XN8 651 aaKnown RBP7.43□□□□□ -1.22
COMMD3-215ENST00000602574 ZDHHC23Q8IYP9 409 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 NUP210Q8TEM1 1887 aaPredicted RBP7.43□□□□□ -1.22
COMMD3-215ENST00000602574 NUDT22Q9BRQ3 303 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 SSBP3Q9BWW4 388 aaPredicted RBP7.43□□□□□ -1.22
COMMD3-215ENST00000602574 PRR13Q9NZ81 148 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 GAGE2DQ9UEU5 116 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 PIGLQ9Y2B2 252 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 IGLV3-16A0A075B6K0 115 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 A0A1W2PPI3 338 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 SNURFLB1AK76 121 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 H3BML4 177 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 APOMO95445 188 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 MPIG6BO95866 241 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 CA3P07451 260 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 PIRTP0C851 137 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 SMIM13P0DJ93 91 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 CD38P28907 300 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 KIR2DS2P43631 304 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 MYBPHQ13203 477 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 ZNF141Q15928 474 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 TMEM64Q6YI46 380 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 ASCL5Q7RTU5 278 aa7.43□□□□□ -1.22
COMMD3-215ENST00000602574 GVQW1Q8N7I0 195 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms