RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 SGK494Q96LW2 274 aa12.23□□□□□ -0.45
RETREG3-208ENST00000589797 PLXNB1O43157 2135 aa12.23□□□□□ -0.45
RETREG3-208ENST00000589797 H0Y8G0 127 aa12.23□□□□□ -0.45
RETREG3-208ENST00000589797 ZNF474Q6S9Z5 364 aaPredicted RBP12.23□□□□□ -0.45
RETREG3-208ENST00000589797 ZBTB34Q8NCN2 500 aa12.23□□□□□ -0.45
RETREG3-208ENST00000589797 PLSCR2Q9NRY7 297 aa12.23□□□□□ -0.45
RETREG3-208ENST00000589797 CSRP1P21291 193 aaKnown RBP12.22□□□□□ -0.45
RETREG3-208ENST00000589797 SLC35B1P78383 322 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 BSXQ3C1V8 233 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 SLC35E4Q6ICL7 350 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 FOXL2NBQ6ZUU3 175 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 FAM210BQ96KR6 192 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 DCAF16Q9NXF7 216 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 IGKV1-6A0A0C4DH72 117 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 H3BTX0 84 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 LY6HO94772 140 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 CT45A6P0DMU7 189 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 CT45A5P0DMU8 189 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 CT45A7P0DMV0 189 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 CT45A1Q5HYN5 189 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 PEAR1Q5VY43 1037 aaPredicted RBP12.22□□□□□ -0.45
RETREG3-208ENST00000589797 WDR25Q64LD2 544 aaPredicted RBP12.22□□□□□ -0.45
RETREG3-208ENST00000589797 ZNF343Q6P1L6 599 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 CT45A3Q8NHU0 189 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 CORO2AQ92828 525 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 RAB1CQ92928 201 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 DMRTA2Q96SC8 542 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 RAB1BQ9H0U4 201 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 IGHV3-35A0A0C4DH35 117 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 A0A0G2JRQ6 117 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 NAPSAO96009 420 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 GATA2P23769 480 aaPredicted RBP12.22□□□□□ -0.45
RETREG3-208ENST00000589797 TAS2R45P59539 299 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 RPL30P62888 115 aaKnown RBP12.22□□□□□ -0.45
RETREG3-208ENST00000589797 OR1B1Q8NGR6 318 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 FAM57AQ8TBR7 257 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 ASCL3Q9NQ33 180 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 TUBD1Q9UJT1 453 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 WNK1Q9H4A3 2382 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 CD24P25063 80 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 MMDQ15546 238 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 SLC24A4Q8NFF2 622 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 FAM117AQ9C073 453 aa12.22□□□□□ -0.45
RETREG3-208ENST00000589797 TMEM131Q92545 1883 aa12.21□□□□□ -0.45
RETREG3-208ENST00000589797 USP9XQ93008 2570 aaPredicted RBP12.21□□□□□ -0.45
RETREG3-208ENST00000589797 ZNF497Q6ZNH5 498 aa12.21□□□□□ -0.45
RETREG3-208ENST00000589797 MUC15Q8N387 334 aa12.21□□□□□ -0.45
RETREG3-208ENST00000589797 VAX2Q9UIW0 290 aa12.21□□□□□ -0.45
RETREG3-208ENST00000589797 TCF19Q9Y242 345 aa12.21□□□□□ -0.45
RETREG3-208ENST00000589797 DUXBA0A1W2PPF3 345 aa12.21□□□□□ -0.45
RETREG3-208ENST00000589797 THBS3P49746 956 aa12.21□□□□□ -0.45
RETREG3-208ENST00000589797 ZNF324BQ6AW86 544 aaPredicted RBP12.21□□□□□ -0.45
RETREG3-208ENST00000589797 Q6ZRM9 215 aa12.21□□□□□ -0.45
RETREG3-208ENST00000589797 NEIL1Q96FI4 390 aaPredicted RBP12.21□□□□□ -0.45
RETREG3-208ENST00000589797 C18orf12Q96KH6 178 aa12.21□□□□□ -0.45
RETREG3-208ENST00000589797 CYTL1Q9NRR1 136 aa12.21□□□□□ -0.45
RETREG3-208ENST00000589797 CLCF1Q9UBD9 225 aa12.21□□□□□ -0.45
RETREG3-208ENST00000589797 NDUFB4O95168 129 aa12.21□□□□□ -0.46
RETREG3-208ENST00000589797 FABP4P15090 132 aa12.21□□□□□ -0.46
RETREG3-208ENST00000589797 NTF3P20783 257 aa12.21□□□□□ -0.46
RETREG3-208ENST00000589797 SUMO1P63165 101 aaKnown RBP12.21□□□□□ -0.46
RETREG3-208ENST00000589797 ZNRD1Q9P1U0 126 aa12.21□□□□□ -0.46
RETREG3-208ENST00000589797 MUC22E2RYF6 1773 aaPredicted RBP12.2□□□□□ -0.46
RETREG3-208ENST00000589797 OR10J1P30954 320 aa12.2□□□□□ -0.46
RETREG3-208ENST00000589797 TFF3Q07654 80 aa12.2□□□□□ -0.46
RETREG3-208ENST00000589797 ATP6V1FQ16864 119 aa12.2□□□□□ -0.46
RETREG3-208ENST00000589797 OR10D4PQ8NGN7 298 aa12.2□□□□□ -0.46
RETREG3-208ENST00000589797 PXMP4Q9Y6I8 212 aa12.2□□□□□ -0.46
RETREG3-208ENST00000589797 S4R3C0 116 aa12.2□□□□□ -0.46
RETREG3-208ENST00000589797 GALR1P47211 349 aa12.2□□□□□ -0.46
RETREG3-208ENST00000589797 LYZP61626 148 aa12.2□□□□□ -0.46
RETREG3-208ENST00000589797 RHOBP62745 196 aa12.2□□□□□ -0.46
RETREG3-208ENST00000589797 PRRX1P54821 245 aa12.2□□□□□ -0.46
RETREG3-208ENST00000589797 TEPPQ6URK8 271 aa12.2□□□□□ -0.46
RETREG3-208ENST00000589797 ASCL5Q7RTU5 278 aa12.2□□□□□ -0.46
RETREG3-208ENST00000589797 WDR31Q8NA23 367 aa12.2□□□□□ -0.46
RETREG3-208ENST00000589797 ADTRPQ96IZ2 230 aa12.2□□□□□ -0.46
RETREG3-208ENST00000589797 FAM103A1Q9BTL3 118 aaKnown RBP12.2□□□□□ -0.46
RETREG3-208ENST00000589797 PLSCR4Q9NRQ2 329 aa12.2□□□□□ -0.46
RETREG3-208ENST00000589797 ZDHHC8Q9ULC8 765 aa12.2□□□□□ -0.46
RETREG3-208ENST00000589797 FAM157CP0CG43 387 aa12.19□□□□□ -0.46
RETREG3-208ENST00000589797 BCL2P10415 239 aa12.19□□□□□ -0.46
RETREG3-208ENST00000589797 RAB5AP20339 215 aa12.19□□□□□ -0.46
RETREG3-208ENST00000589797 UBE2L3P68036 154 aaKnown RBP12.19□□□□□ -0.46
RETREG3-208ENST00000589797 COLCA1Q6ZS62 124 aa12.19□□□□□ -0.46
RETREG3-208ENST00000589797 NEUROG1Q92886 237 aa12.19□□□□□ -0.46
RETREG3-208ENST00000589797 FAM122AQ96E09 287 aa12.19□□□□□ -0.46
RETREG3-208ENST00000589797 RCC1LQ96I51 464 aaKnown RBP12.19□□□□□ -0.46
RETREG3-208ENST00000589797 MRGPRGQ86SM5 289 aa12.19□□□□□ -0.46
RETREG3-208ENST00000589797 DOLPP1Q86YN1 238 aa12.19□□□□□ -0.46
RETREG3-208ENST00000589797 VSIRQ9H7M9 311 aa12.19□□□□□ -0.46
RETREG3-208ENST00000589797 FRYLO94915 3013 aa12.19□□□□□ -0.46
RETREG3-208ENST00000589797 DLX1P56177 255 aa12.19□□□□□ -0.46
RETREG3-208ENST00000589797 TMPRSS3P57727 454 aa12.19□□□□□ -0.46
RETREG3-208ENST00000589797 CD177Q8N6Q3 437 aa12.19□□□□□ -0.46
RETREG3-208ENST00000589797 TMEM56-RWDD3S4R434 201 aa12.19□□□□□ -0.46
RETREG3-208ENST00000589797 IGKV3-7A0A075B6H7 116 aa12.18□□□□□ -0.46
RETREG3-208ENST00000589797 FAM3BP58499 235 aaPredicted RBP12.18□□□□□ -0.46
RETREG3-208ENST00000589797 IDI2-AS1Q9NZ38 188 aa12.18□□□□□ -0.46
RETREG3-208ENST00000589797 CTXND1A0A1B0GTU2 59 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms