RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 FHL2Q14192 279 aa8.33□□□□□ -1.08
SS18-221ENST00000582448 LTC4SQ16873 150 aa8.33□□□□□ -1.08
SS18-221ENST00000582448 LRRC37A5PQ49AS3 106 aa8.33□□□□□ -1.08
SS18-221ENST00000582448 GGNBP1Q5YKI7 109 aa8.33□□□□□ -1.08
SS18-221ENST00000582448 C5orf24Q7Z6I8 188 aa8.33□□□□□ -1.08
SS18-221ENST00000582448 TCTEX1D1Q8N7M0 179 aa8.33□□□□□ -1.08
SS18-221ENST00000582448 OR10A7Q8NGE5 316 aa8.33□□□□□ -1.08
SS18-221ENST00000582448 GLYATL2Q8WU03 294 aa8.33□□□□□ -1.08
SS18-221ENST00000582448 RBPMSQ93062 196 aaKnown RBP8.33□□□□□ -1.08
SS18-221ENST00000582448 TMEM56Q96MV1 263 aa8.33□□□□□ -1.08
SS18-221ENST00000582448 YPEL2Q96QA6 119 aa8.33□□□□□ -1.08
SS18-221ENST00000582448 MFFQ9GZY8 342 aa8.33□□□□□ -1.08
SS18-221ENST00000582448 DCAF16Q9NXF7 216 aa8.33□□□□□ -1.08
SS18-221ENST00000582448 KAAG1Q9UBP8 84 aa8.33□□□□□ -1.08
SS18-221ENST00000582448 CLN8Q9UBY8 286 aa8.33□□□□□ -1.08
SS18-221ENST00000582448 TMEM56-RWDD3S4R434 201 aa8.33□□□□□ -1.08
SS18-221ENST00000582448 IGHV3-43A0A0B4J1X8 118 aa8.32□□□□□ -1.08
SS18-221ENST00000582448 A0A0D9SG52 128 aa8.32□□□□□ -1.08
SS18-221ENST00000582448 DNAJC9-AS1A6NH13 148 aa8.32□□□□□ -1.08
SS18-221ENST00000582448 MPC2O95563 127 aa8.32□□□□□ -1.08
SS18-221ENST00000582448 CDS2O95674 445 aa8.32□□□□□ -1.08
SS18-221ENST00000582448 IGHV3-43DP0DP04 118 aa8.32□□□□□ -1.08
SS18-221ENST00000582448 RPA2P15927 270 aa8.32□□□□□ -1.08
SS18-221ENST00000582448 OMGP23515 440 aa8.32□□□□□ -1.08
SS18-221ENST00000582448 UCP1P25874 307 aa8.32□□□□□ -1.08
SS18-221ENST00000582448 S100A10P60903 97 aa8.32□□□□□ -1.08
SS18-221ENST00000582448 TMEM65Q6PI78 240 aa8.32□□□□□ -1.08
SS18-221ENST00000582448 ZNF66Q6ZN08 573 aa8.32□□□□□ -1.08
SS18-221ENST00000582448 OR11H4Q8NGC9 324 aa8.32□□□□□ -1.08
SS18-221ENST00000582448 OR52M1Q8NGK5 317 aa8.32□□□□□ -1.08
SS18-221ENST00000582448 OR51H1Q8NH63 302 aa8.32□□□□□ -1.08
SS18-221ENST00000582448 CD300LFQ8TDQ1 290 aa8.32□□□□□ -1.08
SS18-221ENST00000582448 ST8SIA2Q92186 375 aa8.32□□□□□ -1.08
SS18-221ENST00000582448 CORO2AQ92828 525 aa8.32□□□□□ -1.08
SS18-221ENST00000582448 RRNAD1Q96FB5 475 aaKnown RBP8.32□□□□□ -1.08
SS18-221ENST00000582448 TP53RKQ96S44 253 aa8.32□□□□□ -1.08
SS18-221ENST00000582448 HSD17B10Q99714 261 aaKnown RBP8.32□□□□□ -1.08
SS18-221ENST00000582448 DCTN5Q9BTE1 182 aa8.32□□□□□ -1.08
SS18-221ENST00000582448 ZC4H2Q9NQZ6 224 aa8.32□□□□□ -1.08
SS18-221ENST00000582448 IDI2-AS1Q9NZ38 188 aa8.32□□□□□ -1.08
SS18-221ENST00000582448 MIOXQ9UGB7 285 aa8.32□□□□□ -1.08
SS18-221ENST00000582448 RNF150Q9ULK6 438 aa8.32□□□□□ -1.08
SS18-221ENST00000582448 PSG11Q9UQ72 335 aa8.32□□□□□ -1.08
SS18-221ENST00000582448 IGHV3OR16-10A0A075B7F0 116 aa8.31□□□□□ -1.08
SS18-221ENST00000582448 DVL1O14640 695 aa8.31□□□□□ -1.08
SS18-221ENST00000582448 ITGB1BP1O14713 200 aa8.31□□□□□ -1.08
SS18-221ENST00000582448 OR2F2O95006 317 aa8.31□□□□□ -1.08
SS18-221ENST00000582448 SCGB1D2O95969 90 aa8.31□□□□□ -1.08
SS18-221ENST00000582448 SELLP14151 372 aa8.31□□□□□ -1.08
SS18-221ENST00000582448 PVALBP20472 110 aaPredicted RBP8.31□□□□□ -1.08
SS18-221ENST00000582448 MDKP21741 143 aaPredicted RBP8.31□□□□□ -1.08
SS18-221ENST00000582448 VDAC1P21796 283 aa8.31□□□□□ -1.08
SS18-221ENST00000582448 GATA3P23771 443 aa8.31□□□□□ -1.08
SS18-221ENST00000582448 NFYBP25208 207 aa8.31□□□□□ -1.08
SS18-221ENST00000582448 PTTG1IPP53801 180 aa8.31□□□□□ -1.08
SS18-221ENST00000582448 OR2F1Q13607 317 aa8.31□□□□□ -1.08
SS18-221ENST00000582448 GNMTQ14749 295 aa8.31□□□□□ -1.08
SS18-221ENST00000582448 MORN2Q502X0 79 aa8.31□□□□□ -1.08
SS18-221ENST00000582448 Q5BKY6 102 aa8.31□□□□□ -1.08
SS18-221ENST00000582448 PRSS54Q6PEW0 395 aa8.31□□□□□ -1.08
SS18-221ENST00000582448 LYZL2Q7Z4W2 148 aa8.31□□□□□ -1.08
SS18-221ENST00000582448 DRAM1Q8N682 238 aa8.31□□□□□ -1.08
SS18-221ENST00000582448 SLC35G3Q8N808 338 aa8.31□□□□□ -1.08
SS18-221ENST00000582448 OR8B3Q8NGG8 313 aa8.31□□□□□ -1.08
SS18-221ENST00000582448 TCTEX1D2Q8WW35 142 aa8.31□□□□□ -1.08
SS18-221ENST00000582448 DCUN1D4Q92564 292 aa8.31□□□□□ -1.08
SS18-221ENST00000582448 ZNF714Q96N38 554 aa8.31□□□□□ -1.08
SS18-221ENST00000582448 OR8B2Q96RD0 313 aa8.31□□□□□ -1.08
SS18-221ENST00000582448 MS4A7Q9GZW8 240 aaPredicted RBP8.31□□□□□ -1.08
SS18-221ENST00000582448 PLSCR3Q9NRY6 295 aa8.31□□□□□ -1.08
SS18-221ENST00000582448 NUP50Q9UKX7 468 aa8.31□□□□□ -1.08
SS18-221ENST00000582448 ARHGAP32A7KAX9 2087 aa8.31□□□□□ -1.08
SS18-221ENST00000582448 A0A1B0GW55 424 aa8.3□□□□□ -1.08
SS18-221ENST00000582448 hCG_1809904A0A1W2PP81 198 aa8.3□□□□□ -1.08
SS18-221ENST00000582448 A0A1W2PPE2 198 aa8.3□□□□□ -1.08
SS18-221ENST00000582448 KANTRA0A1W2PQU2 76 aa8.3□□□□□ -1.08
SS18-221ENST00000582448 A0A1W2PR64 198 aa8.3□□□□□ -1.08
SS18-221ENST00000582448 A0A1W2PRV1 198 aa8.3□□□□□ -1.08
SS18-221ENST00000582448 MEX3AA1L020 520 aaKnown RBP8.3□□□□□ -1.08
SS18-221ENST00000582448 DUX4L2P0CJ85 424 aa8.3□□□□□ -1.08
SS18-221ENST00000582448 DUX4L3P0CJ86 424 aa8.3□□□□□ -1.08
SS18-221ENST00000582448 DUX4L4P0CJ87 422 aa8.3□□□□□ -1.08
SS18-221ENST00000582448 DUX4L5P0CJ88 424 aa8.3□□□□□ -1.08
SS18-221ENST00000582448 DUX4L6P0CJ89 424 aa8.3□□□□□ -1.08
SS18-221ENST00000582448 DUX4L7P0CJ90 424 aa8.3□□□□□ -1.08
SS18-221ENST00000582448 S100A11P31949 105 aa8.3□□□□□ -1.08
SS18-221ENST00000582448 AKR1C2P52895 323 aa8.3□□□□□ -1.08
SS18-221ENST00000582448 AP2S1P53680 142 aaPredicted RBP8.3□□□□□ -1.08
SS18-221ENST00000582448 LGALS4P56470 323 aa8.3□□□□□ -1.08
SS18-221ENST00000582448 ZNF345Q14585 488 aa8.3□□□□□ -1.08
SS18-221ENST00000582448 OPCMLQ14982 345 aa8.3□□□□□ -1.08
SS18-221ENST00000582448 C17orf58Q2M2W7 97 aa8.3□□□□□ -1.08
SS18-221ENST00000582448 LGALSLQ3ZCW2 172 aaPredicted RBP8.3□□□□□ -1.08
SS18-221ENST00000582448 TMEM155Q4W5P6 130 aa8.3□□□□□ -1.08
SS18-221ENST00000582448 LAMTOR1Q6IAA8 161 aa8.3□□□□□ -1.08
SS18-221ENST00000582448 DUX4L9Q6RFH8 374 aaPredicted RBP8.3□□□□□ -1.08
SS18-221ENST00000582448 LYPD2Q6UXB3 125 aa8.3□□□□□ -1.08
SS18-221ENST00000582448 ACOT7LQ6ZUV0 252 aa8.3□□□□□ -1.08
SS18-221ENST00000582448 ZNF767PQ75MW2 155 aa8.3□□□□□ -1.08
SS18-221ENST00000582448 SELENOHQ8IZQ5 122 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms