RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 WBP4O75554 376 aaKnown RBP9.41□□□□□ -0.9
SS18-219ENST00000581570 CRYZL1O95825 349 aa9.41□□□□□ -0.9
SS18-219ENST00000581570 C8orf88P0DMB2 117 aa9.41□□□□□ -0.9
SS18-219ENST00000581570 CTRB1P17538 263 aa9.41□□□□□ -0.9
SS18-219ENST00000581570 RPL35AP18077 110 aaKnown RBP9.41□□□□□ -0.9
SS18-219ENST00000581570 SRMP19623 302 aa9.41□□□□□ -0.9
SS18-219ENST00000581570 SERPINB10P48595 397 aa9.41□□□□□ -0.9
SS18-219ENST00000581570 TCTAP57738 103 aa9.41□□□□□ -0.9
SS18-219ENST00000581570 MED21Q13503 144 aa9.41□□□□□ -0.9
SS18-219ENST00000581570 ZNF585BQ52M93 769 aa9.41□□□□□ -0.9
SS18-219ENST00000581570 C1orf100Q5SVJ3 147 aa9.41□□□□□ -0.9
SS18-219ENST00000581570 C10orf55Q5SWW7 151 aa9.41□□□□□ -0.9
SS18-219ENST00000581570 CTRB2Q6GPI1 263 aa9.41□□□□□ -0.9
SS18-219ENST00000581570 C11orf45Q8TAV5 145 aa9.41□□□□□ -0.9
SS18-219ENST00000581570 MARC2Q969Z3 335 aa9.41□□□□□ -0.9
SS18-219ENST00000581570 C5orf30Q96GV9 206 aa9.41□□□□□ -0.9
SS18-219ENST00000581570 CCDC140Q96MF4 163 aa9.41□□□□□ -0.9
SS18-219ENST00000581570 KCNK15Q9H427 330 aa9.41□□□□□ -0.9
SS18-219ENST00000581570 ZNF257Q9Y2Q1 563 aa9.41□□□□□ -0.9
SS18-219ENST00000581570 DYNC1H1Q14204 4646 aaKnown RBP9.4□□□□□ -0.9
SS18-219ENST00000581570 A0A1B0GVY2 172 aa9.4□□□□□ -0.9
SS18-219ENST00000581570 HMX3A6NHT5 357 aa9.4□□□□□ -0.9
SS18-219ENST00000581570 TMEM14DPA8MWL7 114 aa9.4□□□□□ -0.9
SS18-219ENST00000581570 XRCC3O43542 346 aa9.4□□□□□ -0.9
SS18-219ENST00000581570 CREBL2O60519 120 aaPredicted RBP9.4□□□□□ -0.9
SS18-219ENST00000581570 CD3GP09693 182 aa9.4□□□□□ -0.9
SS18-219ENST00000581570 MAPK3P27361 379 aaPredicted RBP9.4□□□□□ -0.9
SS18-219ENST00000581570 FCGR2BP31994 310 aaPredicted RBP9.4□□□□□ -0.9
SS18-219ENST00000581570 CDK10Q15131 360 aa9.4□□□□□ -0.9
SS18-219ENST00000581570 C19orf35Q6ZS72 473 aa9.4□□□□□ -0.9
SS18-219ENST00000581570 MMD2Q8IY49 270 aa9.4□□□□□ -0.9
SS18-219ENST00000581570 ZNF485Q8NCK3 441 aa9.4□□□□□ -0.9
SS18-219ENST00000581570 OSR1Q8TAX0 266 aaPredicted RBP9.4□□□□□ -0.9
SS18-219ENST00000581570 EEF1AKMT3Q96AZ1 226 aa9.4□□□□□ -0.9
SS18-219ENST00000581570 SPAG8Q99932 426 aaPredicted RBP9.4□□□□□ -0.9
SS18-219ENST00000581570 CMSS1Q9BQ75 279 aaKnown RBP9.4□□□□□ -0.9
SS18-219ENST00000581570 MAP6D1Q9H9H5 199 aa9.4□□□□□ -0.9
SS18-219ENST00000581570 C12orf4Q9NQ89 552 aa9.4□□□□□ -0.9
SS18-219ENST00000581570 MRPL27Q9P0M9 148 aaKnown RBP9.4□□□□□ -0.9
SS18-219ENST00000581570 ABCA13Q86UQ4 5058 aa9.4□□□□□ -0.91
SS18-219ENST00000581570 DPPA5A6NC42 116 aa9.39□□□□□ -0.91
SS18-219ENST00000581570 BET1O15155 118 aa9.39□□□□□ -0.91
SS18-219ENST00000581570 SAA1P0DJI8 122 aaPredicted RBP9.39□□□□□ -0.91
SS18-219ENST00000581570 CELP19835 753 aa9.39□□□□□ -0.91
SS18-219ENST00000581570 TAS2R43P59537 309 aa9.39□□□□□ -0.91
SS18-219ENST00000581570 QRFPP83859 136 aa9.39□□□□□ -0.91
SS18-219ENST00000581570 MED22Q15528 200 aa9.39□□□□□ -0.91
SS18-219ENST00000581570 TTC23Q5W5X9 447 aa9.39□□□□□ -0.91
SS18-219ENST00000581570 UNQ9165/PRO28630Q6UXU0 137 aa9.39□□□□□ -0.91
SS18-219ENST00000581570 CEACAM19Q7Z692 300 aa9.39□□□□□ -0.91
SS18-219ENST00000581570 OR4A4PQ8NGN8 299 aa9.39□□□□□ -0.91
SS18-219ENST00000581570 GALNT14Q96FL9 552 aa9.39□□□□□ -0.91
SS18-219ENST00000581570 TMEM80Q96HE8 168 aa9.39□□□□□ -0.91
SS18-219ENST00000581570 ADTRPQ96IZ2 230 aa9.39□□□□□ -0.91
SS18-219ENST00000581570 FANCD2OSQ96PS1 177 aa9.39□□□□□ -0.91
SS18-219ENST00000581570 RARRES2Q99969 163 aa9.39□□□□□ -0.91
SS18-219ENST00000581570 URM1Q9BTM9 101 aaKnown RBP9.39□□□□□ -0.91
SS18-219ENST00000581570 LPAR5Q9H1C0 372 aa9.39□□□□□ -0.91
SS18-219ENST00000581570 C5orf66Q9H5L9 145 aa9.39□□□□□ -0.91
SS18-219ENST00000581570 HSF4Q9ULV5 492 aa9.39□□□□□ -0.91
SS18-219ENST00000581570 APLNQ9ULZ1 77 aa9.39□□□□□ -0.91
SS18-219ENST00000581570 RBM7Q9Y580 266 aaKnown RBP9.39□□□□□ -0.91
SS18-219ENST00000581570 FAT2Q9NYQ8 4349 aa9.39□□□□□ -0.91
SS18-219ENST00000581570 NPIPB5A8MRT5 1133 aa9.38□□□□□ -0.91
SS18-219ENST00000581570 IGLL5B9A064 214 aa9.38□□□□□ -0.91
SS18-219ENST00000581570 TEX22C9J3V5 150 aa9.38□□□□□ -0.91
SS18-219ENST00000581570 FABP7O15540 132 aa9.38□□□□□ -0.91
SS18-219ENST00000581570 CIB2O75838 187 aa9.38□□□□□ -0.91
SS18-219ENST00000581570 BPNT1O95861 308 aa9.38□□□□□ -0.91
SS18-219ENST00000581570 CLEC3BP05452 202 aa9.38□□□□□ -0.91
SS18-219ENST00000581570 CD1AP06126 327 aa9.38□□□□□ -0.91
SS18-219ENST00000581570 GSTT2P0CG29 244 aa9.38□□□□□ -0.91
SS18-219ENST00000581570 GSTT2BP0CG30 244 aa9.38□□□□□ -0.91
SS18-219ENST00000581570 GALP22466 123 aa9.38□□□□□ -0.91
SS18-219ENST00000581570 DUTP33316 252 aaKnown RBP9.38□□□□□ -0.91
SS18-219ENST00000581570 TMEM50BP56557 158 aa9.38□□□□□ -0.91
SS18-219ENST00000581570 ODF3L2Q3SX64 289 aa9.38□□□□□ -0.91
SS18-219ENST00000581570 LRRTM1Q86UE6 522 aa9.38□□□□□ -0.91
SS18-219ENST00000581570 FAM89BQ8N5H3 189 aa9.38□□□□□ -0.91
SS18-219ENST00000581570 GVQW1Q8N7I0 195 aa9.38□□□□□ -0.91
SS18-219ENST00000581570 OR10J5Q8NHC4 309 aa9.38□□□□□ -0.91
SS18-219ENST00000581570 DCUN1D5Q9BTE7 237 aa9.38□□□□□ -0.91
SS18-219ENST00000581570 UFC1Q9Y3C8 167 aa9.38□□□□□ -0.91
SS18-219ENST00000581570 DNAH2Q9P225 4427 aa9.38□□□□□ -0.91
SS18-219ENST00000581570 PKHD1P08F94 4074 aa9.37□□□□□ -0.91
SS18-219ENST00000581570 LINC00473A8K010 186 aa9.37□□□□□ -0.91
SS18-219ENST00000581570 TSPAN4O14817 238 aa9.37□□□□□ -0.91
SS18-219ENST00000581570 IL6RP08887 468 aaPredicted RBP9.37□□□□□ -0.91
SS18-219ENST00000581570 RASSF2P50749 326 aa9.37□□□□□ -0.91
SS18-219ENST00000581570 ELLP55199 621 aaPredicted RBP9.37□□□□□ -0.91
SS18-219ENST00000581570 INSL4Q14641 139 aa9.37□□□□□ -0.91
SS18-219ENST00000581570 IGSF11Q5DX21 431 aa9.37□□□□□ -0.91
SS18-219ENST00000581570 RBM48Q5RL73 367 aaKnown RBP9.37□□□□□ -0.91
SS18-219ENST00000581570 OR5B3Q8NH48 314 aa9.37□□□□□ -0.91
SS18-219ENST00000581570 ARHGAP5-AS1Q96IT6 56 aa9.37□□□□□ -0.91
SS18-219ENST00000581570 FYTTD1Q96QD9 318 aaKnown RBP9.37□□□□□ -0.91
SS18-219ENST00000581570 C9orf16Q9BUW7 83 aa9.37□□□□□ -0.91
SS18-219ENST00000581570 PECRQ9BY49 303 aa9.37□□□□□ -0.91
SS18-219ENST00000581570 KRTAP4-5Q9BYR2 181 aa9.37□□□□□ -0.91
SS18-219ENST00000581570 CSTL1Q9H114 145 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms