RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 SNURFQ9Y675 71 aa0.57□□□□□ -2.32
CHD9-207ENST00000562806 TMEM94Q12767 1356 aa0.57□□□□□ -2.32
CHD9-207ENST00000562806 TRAV38-1A0A0B4J264 116 aa0.56□□□□□ -2.32
CHD9-207ENST00000562806 IGKV1-9A0A0C4DH69 117 aa0.56□□□□□ -2.32
CHD9-207ENST00000562806 MEIS3P1A6NDR6 274 aa0.56□□□□□ -2.32
CHD9-207ENST00000562806 OR51F1A6NGY5 319 aa0.56□□□□□ -2.32
CHD9-207ENST00000562806 FTCDNL1E5RQL4 147 aa0.56□□□□□ -2.32
CHD9-207ENST00000562806 HCRTO43612 131 aa0.56□□□□□ -2.32
CHD9-207ENST00000562806 NPPAP01160 153 aa0.56□□□□□ -2.32
CHD9-207ENST00000562806 MSMBP08118 114 aa0.56□□□□□ -2.32
CHD9-207ENST00000562806 LGALS1P09382 135 aaKnown RBP0.56□□□□□ -2.32
CHD9-207ENST00000562806 SLCO1A2P46721 670 aa0.56□□□□□ -2.32
CHD9-207ENST00000562806 HAAOP46952 286 aa0.56□□□□□ -2.32
CHD9-207ENST00000562806 REG1BP48304 166 aa0.56□□□□□ -2.32
CHD9-207ENST00000562806 RPS24P62847 133 aaKnown RBP0.56□□□□□ -2.32
CHD9-207ENST00000562806 SMAGPQ0VAQ4 97 aa0.56□□□□□ -2.32
CHD9-207ENST00000562806 ANGPT1Q15389 498 aa0.56□□□□□ -2.32
CHD9-207ENST00000562806 MOGQ16653 247 aa0.56□□□□□ -2.32
CHD9-207ENST00000562806 HLA-DRB5Q30154 266 aa0.56□□□□□ -2.32
CHD9-207ENST00000562806 JOSD2Q8TAC2 188 aa0.56□□□□□ -2.32
CHD9-207ENST00000562806 IMMP2LQ96T52 175 aa0.56□□□□□ -2.32
CHD9-207ENST00000562806 TIPINQ9BVW5 301 aa0.56□□□□□ -2.32
CHD9-207ENST00000562806 CD300AQ9UGN4 299 aa0.56□□□□□ -2.32
CHD9-207ENST00000562806 SMARCA4P51532 1647 aa0.56□□□□□ -2.32
CHD9-207ENST00000562806 FLT4P35916 1363 aa0.56□□□□□ -2.32
CHD9-207ENST00000562806 AHNAK2Q8IVF2 5795 aa0.55□□□□□ -2.32
CHD9-207ENST00000562806 SCAF11Q99590 1463 aaKnown RBP0.55□□□□□ -2.32
CHD9-207ENST00000562806 CHD2O14647 1828 aaKnown RBP0.55□□□□□ -2.32
CHD9-207ENST00000562806 EIF4G1Q04637 1599 aaKnown RBP0.55□□□□□ -2.32
CHD9-207ENST00000562806 A0A0D9SEW6 157 aa0.55□□□□□ -2.32
CHD9-207ENST00000562806 ORC5O43913 435 aa0.55□□□□□ -2.32
CHD9-207ENST00000562806 APOMO95445 188 aa0.55□□□□□ -2.32
CHD9-207ENST00000562806 ORM1P02763 201 aa0.55□□□□□ -2.32
CHD9-207ENST00000562806 CD40LGP29965 261 aa0.55□□□□□ -2.32
CHD9-207ENST00000562806 CDK9P50750 372 aaKnown RBP0.55□□□□□ -2.32
CHD9-207ENST00000562806 HADHBP55084 474 aaKnown RBP0.55□□□□□ -2.32
CHD9-207ENST00000562806 RAB14P61106 215 aa0.55□□□□□ -2.32
CHD9-207ENST00000562806 HLA-DRB3P79483 266 aa0.55□□□□□ -2.32
CHD9-207ENST00000562806 ACSM3Q53FZ2 586 aa0.55□□□□□ -2.32
CHD9-207ENST00000562806 C12orf29Q8N999 325 aa0.55□□□□□ -2.32
CHD9-207ENST00000562806 ANKRD36BP1Q96IX9 119 aa0.55□□□□□ -2.32
CHD9-207ENST00000562806 PACRGQ96M98 296 aaPredicted RBP0.55□□□□□ -2.32
CHD9-207ENST00000562806 SLC22A4Q9H015 551 aa0.55□□□□□ -2.32
CHD9-207ENST00000562806 TP53TG1Q9Y2A0 90 aa0.55□□□□□ -2.32
CHD9-207ENST00000562806 DSCAMO60469 2012 aa0.55□□□□□ -2.32
CHD9-207ENST00000562806 ABCC12Q96J65 1359 aa0.55□□□□□ -2.32
CHD9-207ENST00000562806 BRI3O95415 125 aa0.54□□□□□ -2.32
CHD9-207ENST00000562806 ATP6V1G2O95670 118 aa0.54□□□□□ -2.32
CHD9-207ENST00000562806 IL6P05231 212 aa0.54□□□□□ -2.32
CHD9-207ENST00000562806 NFYAP23511 347 aaPredicted RBP0.54□□□□□ -2.32
CHD9-207ENST00000562806 MSNP26038 577 aaKnown RBP0.54□□□□□ -2.32
CHD9-207ENST00000562806 AQP4P55087 323 aa0.54□□□□□ -2.32
CHD9-207ENST00000562806 EMX1Q04741 257 aaPredicted RBP0.54□□□□□ -2.32
CHD9-207ENST00000562806 CDK10Q15131 360 aa0.54□□□□□ -2.32
CHD9-207ENST00000562806 SURF2Q15527 256 aaPredicted RBP0.54□□□□□ -2.32
CHD9-207ENST00000562806 GPHB5Q86YW7 130 aa0.54□□□□□ -2.32
CHD9-207ENST00000562806 Q8N2B8 174 aa0.54□□□□□ -2.32
CHD9-207ENST00000562806 UMODL1-AS1Q8N2C9 162 aa0.54□□□□□ -2.32
CHD9-207ENST00000562806 RNASE6Q93091 150 aaKnown RBP0.54□□□□□ -2.32
CHD9-207ENST00000562806 ZNF514Q96K75 400 aaPredicted RBP0.54□□□□□ -2.32
CHD9-207ENST00000562806 CCL13Q99616 98 aa0.54□□□□□ -2.32
CHD9-207ENST00000562806 TMEM109Q9BVC6 243 aa0.54□□□□□ -2.32
CHD9-207ENST00000562806 TTTY13Q9BZ97 58 aa0.54□□□□□ -2.32
CHD9-207ENST00000562806 NSRP1Q9H0G5 558 aaKnown RBP0.54□□□□□ -2.32
CHD9-207ENST00000562806 SPACA1Q9HBV2 294 aa0.54□□□□□ -2.32
CHD9-207ENST00000562806 TREM1Q9NP99 234 aa0.54□□□□□ -2.32
CHD9-207ENST00000562806 RSL24D1Q9UHA3 163 aaKnown RBP0.54□□□□□ -2.32
CHD9-207ENST00000562806 RBM7Q9Y580 266 aaKnown RBP0.54□□□□□ -2.32
CHD9-207ENST00000562806 WDR90Q96KV7 1748 aa0.53□□□□□ -2.32
CHD9-207ENST00000562806 SDCBPO00560 298 aaPredicted RBP0.53□□□□□ -2.32
CHD9-207ENST00000562806 METTL15P1P0C7V9 234 aa0.53□□□□□ -2.32
CHD9-207ENST00000562806 TRGC1P0CF51 173 aa0.53□□□□□ -2.32
CHD9-207ENST00000562806 PET100P0DJ07 73 aa0.53□□□□□ -2.32
CHD9-207ENST00000562806 PRB4P10163 310 aaPredicted RBP0.53□□□□□ -2.32
CHD9-207ENST00000562806 HIST1H1CP16403 213 aaKnown RBP0.53□□□□□ -2.32
CHD9-207ENST00000562806 RPL28P46779 137 aaKnown RBP0.53□□□□□ -2.32
CHD9-207ENST00000562806 POLR2GP62487 172 aaKnown RBP eCLIP0.53□□□□□ -2.32
CHD9-207ENST00000562806 CTAG1AP78358 180 aa0.53□□□□□ -2.32
CHD9-207ENST00000562806 C4orf26Q17RF5 130 aa0.53□□□□□ -2.32
CHD9-207ENST00000562806 SDHAF4Q5VUM1 108 aa0.53□□□□□ -2.32
CHD9-207ENST00000562806 DNM1P34Q6PK57 102 aa0.53□□□□□ -2.32
CHD9-207ENST00000562806 RASSF6Q6ZTQ3 369 aa0.53□□□□□ -2.32
CHD9-207ENST00000562806 SYCE1Q8N0S2 351 aa0.53□□□□□ -2.32
CHD9-207ENST00000562806 RAB2BQ8WUD1 216 aa0.53□□□□□ -2.32
CHD9-207ENST00000562806 ASB13Q8WXK3 278 aa0.53□□□□□ -2.32
CHD9-207ENST00000562806 DHRS9Q9BPW9 319 aa0.53□□□□□ -2.32
CHD9-207ENST00000562806 CHMP4BQ9H444 224 aaKnown RBP0.53□□□□□ -2.32
CHD9-207ENST00000562806 AK3Q9UIJ7 227 aa0.53□□□□□ -2.32
CHD9-207ENST00000562806 NUMA1Q14980 2115 aa0.52□□□□□ -2.33
CHD9-207ENST00000562806 HSBP1L1C9JCN9 74 aa0.52□□□□□ -2.33
CHD9-207ENST00000562806 H3BT86 120 aa0.52□□□□□ -2.33
CHD9-207ENST00000562806 GEMIN2O14893 280 aaKnown RBP0.52□□□□□ -2.33
CHD9-207ENST00000562806 AZIN1O14977 448 aa0.52□□□□□ -2.33
CHD9-207ENST00000562806 GRPRP30550 384 aa0.52□□□□□ -2.33
CHD9-207ENST00000562806 C10orf55Q5SWW7 151 aa0.52□□□□□ -2.33
CHD9-207ENST00000562806 FAM173BQ6P4H8 233 aa0.52□□□□□ -2.33
CHD9-207ENST00000562806 C5orf46Q6UWT4 87 aa0.52□□□□□ -2.33
CHD9-207ENST00000562806 FAM19A5Q7Z5A7 132 aaPredicted RBP0.52□□□□□ -2.33
CHD9-207ENST00000562806 TBC1D19Q8N5T2 526 aa0.52□□□□□ -2.33
CHD9-207ENST00000562806 UBL4BQ8N7F7 174 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms