RNA–Protein interactions for RNA: ENST00000560607.5

SNX22-204, Transcript of sorting nexin 22, humanhuman

TSL 2

Gene SNX22, Length 1,182 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-204ENST00000560607 SLC25A42Q86VD7 318 aa13.2□□□□□ -0.3
SNX22-204ENST00000560607 TCTEX1D1Q8N7M0 179 aa13.2□□□□□ -0.3
SNX22-204ENST00000560607 OR2T10Q8NGZ9 312 aa13.2□□□□□ -0.3
SNX22-204ENST00000560607 TMEM230Q96A57 120 aa13.2□□□□□ -0.3
SNX22-204ENST00000560607 FAM181BA6NEQ2 426 aa13.19□□□□□ -0.3
SNX22-204ENST00000560607 H0Y980 276 aa13.19□□□□□ -0.3
SNX22-204ENST00000560607 HOXA3O43365 443 aaPredicted RBP13.19□□□□□ -0.3
SNX22-204ENST00000560607 PEX14O75381 377 aa13.19□□□□□ -0.3
SNX22-204ENST00000560607 MOSP00540 346 aa13.19□□□□□ -0.3
SNX22-204ENST00000560607 IGHV4-59P01825 116 aa13.19□□□□□ -0.3
SNX22-204ENST00000560607 IER3P46695 156 aa13.19□□□□□ -0.3
SNX22-204ENST00000560607 UBE2MP61081 183 aaKnown RBP13.19□□□□□ -0.3
SNX22-204ENST00000560607 RPS16P62249 146 aaKnown RBP13.19□□□□□ -0.3
SNX22-204ENST00000560607 C2orf68Q2NKX9 166 aa13.19□□□□□ -0.3
SNX22-204ENST00000560607 SP6Q3SY56 376 aa13.19□□□□□ -0.3
SNX22-204ENST00000560607 DHRS7BQ6IAN0 325 aaPredicted RBP13.19□□□□□ -0.3
SNX22-204ENST00000560607 THNSL2Q86YJ6 484 aa13.19□□□□□ -0.3
SNX22-204ENST00000560607 OR5R1Q8NH85 324 aa13.19□□□□□ -0.3
SNX22-204ENST00000560607 CD300LFQ8TDQ1 290 aa13.19□□□□□ -0.3
SNX22-204ENST00000560607 SSMEM1Q8WWF3 244 aa13.19□□□□□ -0.3
SNX22-204ENST00000560607 FLYWCH2Q96CP2 140 aaKnown RBP13.19□□□□□ -0.3
SNX22-204ENST00000560607 RBMXL1Q96E39 390 aaKnown RBP13.19□□□□□ -0.3
SNX22-204ENST00000560607 PRDM13Q9H4Q3 707 aa13.19□□□□□ -0.3
SNX22-204ENST00000560607 INMT-MINDY4F8WBC2 141 aa13.18□□□□□ -0.3
SNX22-204ENST00000560607 SHOXO15266 292 aa13.18□□□□□ -0.3
SNX22-204ENST00000560607 RAMP3O60896 148 aa13.18□□□□□ -0.3
SNX22-204ENST00000560607 B3GALNT1O75752 331 aa13.18□□□□□ -0.3
SNX22-204ENST00000560607 HLA-AP01891 365 aaKnown RBP13.18□□□□□ -0.3
SNX22-204ENST00000560607 SERPINE2P07093 398 aa13.18□□□□□ -0.3
SNX22-204ENST00000560607 OR5AC1P0C628 307 aa13.18□□□□□ -0.3
SNX22-204ENST00000560607 OR4E1P0C645 316 aa13.18□□□□□ -0.3
SNX22-204ENST00000560607 LPAR6P43657 344 aa13.18□□□□□ -0.3
SNX22-204ENST00000560607 PPP1R1AQ13522 171 aa13.18□□□□□ -0.3
SNX22-204ENST00000560607 OR4C13Q8NGP0 309 aa13.18□□□□□ -0.3
SNX22-204ENST00000560607 EAF1Q96JC9 268 aaPredicted RBP13.18□□□□□ -0.3
SNX22-204ENST00000560607 HARBI1Q96MB7 349 aa13.18□□□□□ -0.3
SNX22-204ENST00000560607 TP53RKQ96S44 253 aa13.18□□□□□ -0.3
SNX22-204ENST00000560607 PITPNC1Q9UKF7 332 aa13.18□□□□□ -0.3
SNX22-204ENST00000560607 TCF19Q9Y242 345 aa13.18□□□□□ -0.3
SNX22-204ENST00000560607 TET2Q6N021 2002 aaPredicted RBP13.17□□□□□ -0.3
SNX22-204ENST00000560607 FAM90A9PA6NNJ1 464 aa13.17□□□□□ -0.3
SNX22-204ENST00000560607 RBFOX2O43251 390 aaKnown RBP eCLIP13.17□□□□□ -0.3
SNX22-204ENST00000560607 DHFRP00374 187 aa13.17□□□□□ -0.3
SNX22-204ENST00000560607 HPRT1P00492 218 aa13.17□□□□□ -0.3
SNX22-204ENST00000560607 IGKV1-16P04430 117 aa13.17□□□□□ -0.3
SNX22-204ENST00000560607 DHODHQ02127 395 aa13.17□□□□□ -0.3
SNX22-204ENST00000560607 TMEM219Q86XT9 240 aa13.17□□□□□ -0.3
SNX22-204ENST00000560607 OSR1Q8TAX0 266 aaPredicted RBP13.17□□□□□ -0.3
SNX22-204ENST00000560607 CASTOR1Q8WTX7 329 aa13.17□□□□□ -0.3
SNX22-204ENST00000560607 TMEM222Q9H0R3 208 aa13.17□□□□□ -0.3
SNX22-204ENST00000560607 RNF114Q9Y508 228 aa13.17□□□□□ -0.3
SNX22-204ENST00000560607 NDUFA7O95182 113 aa13.16□□□□□ -0.3
SNX22-204ENST00000560607 SFT2D2O95562 160 aa13.16□□□□□ -0.3
SNX22-204ENST00000560607 VSIG10L2P0DP72 767 aa13.16□□□□□ -0.3
SNX22-204ENST00000560607 BRWD1-AS2P59051 145 aa13.16□□□□□ -0.3
SNX22-204ENST00000560607 SUPT4H1P63272 117 aaKnown RBP13.16□□□□□ -0.3
SNX22-204ENST00000560607 RELBQ01201 579 aa13.16□□□□□ -0.3
SNX22-204ENST00000560607 EBI3Q14213 229 aa13.16□□□□□ -0.3
SNX22-204ENST00000560607 TMEM177Q53S58 311 aa13.16□□□□□ -0.3
SNX22-204ENST00000560607 LYG2Q86SG7 212 aa13.16□□□□□ -0.3
SNX22-204ENST00000560607 MINDY2Q8NBR6 621 aa13.16□□□□□ -0.3
SNX22-204ENST00000560607 PIFOQ8TCI5 191 aa13.16□□□□□ -0.3
SNX22-204ENST00000560607 GALNT14Q96FL9 552 aa13.16□□□□□ -0.3
SNX22-204ENST00000560607 TSNAXQ99598 290 aaKnown RBP13.16□□□□□ -0.3
SNX22-204ENST00000560607 MARVELD1Q9BSK0 173 aa13.16□□□□□ -0.3
SNX22-204ENST00000560607 SLC25A33Q9BSK2 321 aa13.16□□□□□ -0.3
SNX22-204ENST00000560607 ALX4Q9H161 411 aaPredicted RBP13.16□□□□□ -0.3
SNX22-204ENST00000560607 GPN1Q9HCN4 374 aaPredicted RBP13.16□□□□□ -0.3
SNX22-204ENST00000560607 FAM212BQ9NTI7 297 aaPredicted RBP13.16□□□□□ -0.3
SNX22-204ENST00000560607 C1RLQ9NZP8 487 aa13.16□□□□□ -0.3
SNX22-204ENST00000560607 KIAA1456Q9P272 454 aa13.16□□□□□ -0.3
SNX22-204ENST00000560607 VPREB3Q9UKI3 123 aa13.16□□□□□ -0.3
SNX22-204ENST00000560607 POMT1Q9Y6A1 747 aa13.16□□□□□ -0.3
SNX22-204ENST00000560607 COL7A1Q02388 2944 aa13.16□□□□□ -0.3
SNX22-204ENST00000560607 PLXNB1O43157 2135 aa13.15□□□□□ -0.3
SNX22-204ENST00000560607 C9orf170A2RU37 121 aa13.15□□□□□ -0.3
SNX22-204ENST00000560607 A6NDX4 124 aa13.15□□□□□ -0.3
SNX22-204ENST00000560607 NCBP2LA6PVI3 153 aaKnown RBP13.15□□□□□ -0.3
SNX22-204ENST00000560607 S1PR2O95136 353 aa13.15□□□□□ -0.3
SNX22-204ENST00000560607 HRASP01112 189 aa13.15□□□□□ -0.3
SNX22-204ENST00000560607 RPA2P15927 270 aa13.15□□□□□ -0.3
SNX22-204ENST00000560607 UCP1P25874 307 aa13.15□□□□□ -0.3
SNX22-204ENST00000560607 ERVK-16P61578 105 aa13.15□□□□□ -0.3
SNX22-204ENST00000560607 DHRS2Q13268 280 aa13.15□□□□□ -0.3
SNX22-204ENST00000560607 MMDQ15546 238 aa13.15□□□□□ -0.3
SNX22-204ENST00000560607 ZNF695Q8IW36 515 aa13.15□□□□□ -0.3
SNX22-204ENST00000560607 TMEM86BQ8N661 226 aa13.15□□□□□ -0.3
SNX22-204ENST00000560607 RNASE11Q8TAA1 199 aaKnown RBP13.15□□□□□ -0.3
SNX22-204ENST00000560607 R3HDM4Q96D70 268 aa13.15□□□□□ -0.3
SNX22-204ENST00000560607 RNF5Q99942 180 aa13.15□□□□□ -0.3
SNX22-204ENST00000560607 AIFM2Q9BRQ8 373 aa13.15□□□□□ -0.3
SNX22-204ENST00000560607 PLEKHA2Q9HB19 425 aa13.15□□□□□ -0.3
SNX22-204ENST00000560607 AURKAIP1Q9NWT8 199 aaPredicted RBP13.15□□□□□ -0.3
SNX22-204ENST00000560607 PRR13Q9NZ81 148 aa13.15□□□□□ -0.3
SNX22-204ENST00000560607 COMMD9Q9P000 198 aa13.15□□□□□ -0.3
SNX22-204ENST00000560607 NBR2O15453 112 aa13.14□□□□□ -0.31
SNX22-204ENST00000560607 PRAF2O60831 178 aa13.14□□□□□ -0.31
SNX22-204ENST00000560607 ATG12O94817 140 aa13.14□□□□□ -0.31
SNX22-204ENST00000560607 CNTFRP26992 372 aa13.14□□□□□ -0.31
SNX22-204ENST00000560607 LGALS7P47929 136 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms