RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 NPCDR1Q9BY65 106 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 PARD6GQ9BYG4 376 aaPredicted RBP4.28□□□□□ -1.72
HMG20A-204ENST00000558288 BET1LQ9NYM9 111 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 CEP192Q8TEP8 1941 aa4.28□□□□□ -1.72
HMG20A-204ENST00000558288 ZNF407Q9C0G0 2248 aa4.28□□□□□ -1.73
HMG20A-204ENST00000558288 LOC102724200A0A096LPH7 203 aaPredicted RBP4.27□□□□□ -1.73
HMG20A-204ENST00000558288 A8MXE2 369 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 HYPMO75409 117 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 SYNGR4O95473 234 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 IGHEP01854 428 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 CCL2P13500 99 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 G6PCP35575 357 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 PTGDSP41222 190 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 SLC35B1P78383 322 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 C9orf135Q5VTT2 229 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 PLXDC1Q8IUK5 500 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 C1orf174Q8IYL3 243 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 FGFRL1Q8N441 504 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 KLHDC1Q8N7A1 406 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 ORAOV1Q8WV07 137 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 OR5P3Q8WZ94 311 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 APOBEC3DQ96AK3 386 aaPredicted RBP4.27□□□□□ -1.73
HMG20A-204ENST00000558288 BORCS7Q96B45 105 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 NRN1Q9NPD7 142 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 SLC45A2Q9UMX9 530 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 SSUH2Q9Y2M2 353 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 RNF114Q9Y508 228 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 LRP4O75096 1905 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 ATMQ13315 3056 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 SCO2A0A1W2PP80 73 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 OR6C6A6NF89 314 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 ITGB1BP1O14713 200 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 ZG16O60844 167 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 IGLV3-19P01714 112 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 LINC00310P59036 64 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 YPEL3P61236 119 aaPredicted RBP4.27□□□□□ -1.73
HMG20A-204ENST00000558288 FGF12P61328 243 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 UBE2V1Q13404 147 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 DEFB109BQ30KR1 87 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 KRTCAP3Q53RY4 240 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 TMEM42Q69YG0 159 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 ZNF324BQ6AW86 544 aaPredicted RBP4.27□□□□□ -1.73
HMG20A-204ENST00000558288 Q6ZSR3 168 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 MRPL21Q7Z2W9 205 aaKnown RBP4.27□□□□□ -1.73
HMG20A-204ENST00000558288 KMT5CQ86Y97 462 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 ZNF808Q8N4W9 903 aaPredicted RBP4.27□□□□□ -1.73
HMG20A-204ENST00000558288 TCTEX1D1Q8N7M0 179 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 OR1L1Q8NH94 360 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 OCC1Q8TAD7 63 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 ZDHHC16Q969W1 377 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 SPACA9Q96E40 222 aaPredicted RBP4.27□□□□□ -1.73
HMG20A-204ENST00000558288 TRAPPC2LQ9UL33 140 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 ADAMTS20P59510 1910 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 M0QZ24 198 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 SYNGR1O43759 233 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 DUX1O43812 170 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 ZNF253O75346 499 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 AGFG2O95081 481 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 VAMP5O95183 116 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 FRMD6-AS1P0C7T7 363 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 ACP1P24666 158 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 TIMP3P35625 211 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 CDKN1BP46527 198 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 TCL1AP56279 114 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 RPEL1Q2QD12 228 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 CEACAM16Q2WEN9 425 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 PCSK4Q6UW60 755 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 AAED1Q7RTV5 226 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 OR8I2Q8N0Y5 310 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 LYG1Q8N1E2 194 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 FAM19A2Q8N3H0 131 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 NFAM1Q8NET5 270 aaPredicted RBP4.27□□□□□ -1.73
HMG20A-204ENST00000558288 REPIN1Q9BWE0 567 aaKnown RBP4.27□□□□□ -1.73
HMG20A-204ENST00000558288 QTRT1Q9BXR0 403 aaKnown RBP4.27□□□□□ -1.73
HMG20A-204ENST00000558288 OR2H1Q9GZK4 316 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 GNB4Q9HAV0 340 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 KCNIP2Q9NS61 270 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 SLC35D1Q9NTN3 355 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 TMEM38BQ9NVV0 291 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 MTCH1Q9NZJ7 389 aa4.27□□□□□ -1.73
HMG20A-204ENST00000558288 ESPL1Q14674 2120 aa4.26□□□□□ -1.73
HMG20A-204ENST00000558288 LRP5LA4QPB2 252 aa4.26□□□□□ -1.73
HMG20A-204ENST00000558288 DPRXA6NFQ7 191 aa4.26□□□□□ -1.73
HMG20A-204ENST00000558288 GPX1P07203 203 aa4.26□□□□□ -1.73
HMG20A-204ENST00000558288 IGLC2P0DOY2 106 aa4.26□□□□□ -1.73
HMG20A-204ENST00000558288 IGLC3P0DOY3 106 aa4.26□□□□□ -1.73
HMG20A-204ENST00000558288 CCL4P13236 92 aa4.26□□□□□ -1.73
HMG20A-204ENST00000558288 OTX2P32243 289 aa4.26□□□□□ -1.73
HMG20A-204ENST00000558288 COMPP49747 757 aaPredicted RBP4.26□□□□□ -1.73
HMG20A-204ENST00000558288 DAZAP2Q15038 168 aaPredicted RBP4.26□□□□□ -1.73
HMG20A-204ENST00000558288 RNPS1Q15287 305 aaKnown RBP4.26□□□□□ -1.73
HMG20A-204ENST00000558288 IGFBP7Q16270 282 aa4.26□□□□□ -1.73
HMG20A-204ENST00000558288 FBLN7Q53RD9 439 aa4.26□□□□□ -1.73
HMG20A-204ENST00000558288 TMEM14EPQ6UXP3 125 aa4.26□□□□□ -1.73
HMG20A-204ENST00000558288 Q6ZS49 121 aa4.26□□□□□ -1.73
HMG20A-204ENST00000558288 SMIM15Q7Z3B0 74 aa4.26□□□□□ -1.73
HMG20A-204ENST00000558288 AGBL5Q8NDL9 886 aa4.26□□□□□ -1.73
HMG20A-204ENST00000558288 OR5A2Q8NGI9 324 aa4.26□□□□□ -1.73
HMG20A-204ENST00000558288 FGFBP3Q8TAT2 258 aa4.26□□□□□ -1.73
HMG20A-204ENST00000558288 UHRF2Q96PU4 802 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms