RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 PITPNC1Q9UKF7 332 aa1.81□□□□□ -2.12
SNHG1-224ENST00000545688 RPH3ALQ9UNE2 315 aa1.81□□□□□ -2.12
SNHG1-224ENST00000545688 POLDIP2Q9Y2S7 368 aa1.81□□□□□ -2.12
SNHG1-224ENST00000545688 KCNIP3Q9Y2W7 256 aa1.81□□□□□ -2.12
SNHG1-224ENST00000545688 GMEB1Q9Y692 573 aa1.81□□□□□ -2.12
SNHG1-224ENST00000545688 IGHV3OR15-7A0A075B7D8 119 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 C17orf98A8MV24 154 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 I3L521 148 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 SGCEO43556 437 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 NDUFB3O43676 98 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 TPST1O60507 370 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 GMDSO60547 372 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 PEX11AO75192 247 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 OR2F2O95006 317 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 CPSF4O95639 269 aaKnown RBP1.8□□□□□ -2.12
SNHG1-224ENST00000545688 ETS2P15036 469 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 MSR1P21757 451 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 OTX1P32242 354 aaPredicted RBP1.8□□□□□ -2.12
SNHG1-224ENST00000545688 GGT2P36268 569 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 CDKN2CP42773 168 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 PLTPP55058 493 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 PCBD1P61457 104 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 LSM6P62312 80 aaKnown RBP1.8□□□□□ -2.12
SNHG1-224ENST00000545688 MRPS25P82663 173 aaKnown RBP1.8□□□□□ -2.12
SNHG1-224ENST00000545688 HPCAP84074 193 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 RUNX1Q01196 453 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 CAV1Q03135 178 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 FMODQ06828 376 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 RPL18Q07020 188 aaKnown RBP1.8□□□□□ -2.12
SNHG1-224ENST00000545688 SCRN3Q0VDG4 424 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 OR1Q1Q15612 314 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 OR8B8Q15620 311 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 UAP1Q16222 522 aaPredicted RBP1.8□□□□□ -2.12
SNHG1-224ENST00000545688 MINOS1Q5TGZ0 78 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 ANXA8L1Q5VT79 327 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 HHATQ5VTY9 493 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 CEMP1Q6PRD7 247 aaPredicted RBP1.8□□□□□ -2.12
SNHG1-224ENST00000545688 SMARCD3Q6STE5 483 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 WDR82Q6UXN9 313 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 LINC00336Q6ZUF6 198 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 SLC36A1Q7Z2H8 476 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 LYPD6Q86Y78 171 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 CALHM1Q8IU99 346 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 SLC30A8Q8IWU4 369 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 LRRC34Q8IZ02 419 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 SLC35F6Q8N357 371 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 COMMD1Q8N668 190 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 LRRC75AQ8NAA5 344 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 OR9Q1Q8NGQ5 310 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 OR10Z1Q8NGY1 313 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 ACMSDQ8TDX5 336 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 TWIST2Q8WVJ9 160 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 APOBEC3DQ96AK3 386 aaPredicted RBP1.8□□□□□ -2.12
SNHG1-224ENST00000545688 RBM14Q96PK6 669 aaKnown RBP1.8□□□□□ -2.12
SNHG1-224ENST00000545688 NAPGQ99747 312 aaPredicted RBP1.8□□□□□ -2.12
SNHG1-224ENST00000545688 ZNF649Q9BS31 505 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 SLC22A4Q9H015 551 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 TXNIPQ9H3M7 391 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 CCNB1IP1Q9NPC3 277 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 PTTG3PQ9NZH4 202 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 ADA2Q9NZK5 511 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 CALML5Q9NZT1 146 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 STX18Q9P2W9 335 aaKnown RBP1.8□□□□□ -2.12
SNHG1-224ENST00000545688 TBL2Q9Y4P3 447 aaKnown RBP1.8□□□□□ -2.12
SNHG1-224ENST00000545688 MINOS1-NBL1R4GNA1 71 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 PKHD1L1Q86WI1 4243 aa1.8□□□□□ -2.12
SNHG1-224ENST00000545688 FLG2Q5D862 2391 aaPredicted RBP1.8□□□□□ -2.12
SNHG1-224ENST00000545688 LRP1Q07954 4544 aaKnown RBP1.8□□□□□ -2.12
SNHG1-224ENST00000545688 KIAA2026Q5HYC2 2103 aa1.79□□□□□ -2.12
SNHG1-224ENST00000545688 GMNCA6NCL1 334 aa1.79□□□□□ -2.12
SNHG1-224ENST00000545688 CD300LBA8K4G0 201 aa1.79□□□□□ -2.12
SNHG1-224ENST00000545688 LY6LH3BQJ8 138 aa1.79□□□□□ -2.12
SNHG1-224ENST00000545688 RNF13O43567 381 aa1.79□□□□□ -2.12
SNHG1-224ENST00000545688 CHP2O43745 196 aa1.79□□□□□ -2.12
SNHG1-224ENST00000545688 PLIN3O60664 434 aa1.79□□□□□ -2.12
SNHG1-224ENST00000545688 IGHG2P01859 326 aa1.79□□□□□ -2.12
SNHG1-224ENST00000545688 RBP4P02753 201 aa1.79□□□□□ -2.12
SNHG1-224ENST00000545688 TFF1P04155 84 aa1.79□□□□□ -2.12
SNHG1-224ENST00000545688 ACSM4P0C7M7 580 aa1.79□□□□□ -2.12
SNHG1-224ENST00000545688 CTLA4P16410 223 aa1.79□□□□□ -2.12
SNHG1-224ENST00000545688 LGALS3P17931 250 aaKnown RBP1.79□□□□□ -2.12
SNHG1-224ENST00000545688 TCP1P17987 556 aaKnown RBP1.79□□□□□ -2.12
SNHG1-224ENST00000545688 RPL13AP40429 203 aaKnown RBP1.79□□□□□ -2.12
SNHG1-224ENST00000545688 AQP2P41181 271 aa1.79□□□□□ -2.12
SNHG1-224ENST00000545688 IL15RAQ13261 267 aa1.79□□□□□ -2.12
SNHG1-224ENST00000545688 SSX2Q16385 188 aa1.79□□□□□ -2.12
SNHG1-224ENST00000545688 DEFB136Q30KP8 78 aa1.79□□□□□ -2.12
SNHG1-224ENST00000545688 UNQ9165/PRO28630Q6UXU0 137 aa1.79□□□□□ -2.12
SNHG1-224ENST00000545688 TCF23Q7RTU1 214 aa1.79□□□□□ -2.12
SNHG1-224ENST00000545688 HDDC2Q7Z4H3 204 aa1.79□□□□□ -2.12
SNHG1-224ENST00000545688 NAA40Q86UY6 237 aa1.79□□□□□ -2.12
SNHG1-224ENST00000545688 NUDCD3Q8IVD9 361 aa1.79□□□□□ -2.12
SNHG1-224ENST00000545688 C10orf107Q8IVU9 208 aa1.79□□□□□ -2.12
SNHG1-224ENST00000545688 CNPY4Q8N129 248 aa1.79□□□□□ -2.12
SNHG1-224ENST00000545688 DRAM1Q8N682 238 aa1.79□□□□□ -2.12
SNHG1-224ENST00000545688 CCNYL1Q8N7R7 359 aa1.79□□□□□ -2.12
SNHG1-224ENST00000545688 OR1M1Q8NGA1 313 aa1.79□□□□□ -2.12
SNHG1-224ENST00000545688 OR4D11Q8NGI4 311 aa1.79□□□□□ -2.12
SNHG1-224ENST00000545688 OR5L1Q8NGL2 311 aa1.79□□□□□ -2.12
SNHG1-224ENST00000545688 OR4A15Q8NGL6 344 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms