RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 MIDNQ504T8 468 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 LAMTOR1Q6IAA8 161 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 LYZL2Q7Z4W2 148 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 NUP37Q8NFH4 326 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 SPAG8Q99932 426 aaPredicted RBP5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 TLNRD1Q9H1K6 362 aa5.89□□□□□ -1.47
SRGAP1-206ENST00000543397 PCNX1Q96RV3 2341 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 DUXBA0A1W2PPF3 345 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 SCTP09683 121 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 DYNLT3P51808 116 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 RIPPLY3P57055 190 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 RPL30P62888 115 aaKnown RBP5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 FAM106AQ4KMX7 169 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 MYPOPQ86VE0 399 aaPredicted RBP5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 ZNRF1Q8ND25 227 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 ST6GALNAC3Q8NDV1 305 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 WSB1Q9Y6I7 421 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 C17orf100A8MU93 164 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 GLIPR1P48060 266 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 PSG5Q15238 335 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 CBLN4Q9NTU7 201 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 TCF20Q9UGU0 1960 aaKnown RBP5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 MED12Q93074 2177 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 hCG_38984A0A1B0GV85 526 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 TMEM218A2RU14 115 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 SS18L1O75177 396 aaPredicted RBP5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 EDN2P20800 178 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 LINC01590Q5TEZ4 76 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 EBLN2Q6P2I7 272 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 OR4P4Q8NGL7 312 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 NRIP2Q9BQI9 281 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 RCC1P18754 421 aaPredicted RBP5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 RAB5AP20339 215 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 GNLYP22749 145 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 SULT1A1P50225 295 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 TMEM50BP56557 158 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 SMAGPQ0VAQ4 97 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 KIAA0141Q14154 515 aaPredicted RBP5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 CXorf66Q5JRM2 361 aaPredicted RBP5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 HCP5Q6MZN7 132 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 ZNF645Q8N7E2 425 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 OR4C13Q8NGP0 309 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 OR2T10Q8NGZ9 312 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 OR5P3Q8WZ94 311 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 MARVELD1Q9BSK0 173 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 LMX1BO60663 402 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 ZNF737O75373 536 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 ERVS71-1P61550 626 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 ZNF154Q13106 437 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 JMJD8Q96S16 334 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 METTL26Q96S19 204 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 TP53RKQ96S44 253 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 OR51M1Q9H341 326 aa5.88□□□□□ -1.47
SRGAP1-206ENST00000543397 GREB1Q4ZG55 1949 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 UBE2V2Q15819 145 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 C1orf100Q5SVJ3 147 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 Q6ZN92 141 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 C16orf82Q7Z2V1 217 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 STPG3Q8N7X2 389 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 HYPMO75409 117 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 FCN3O75636 299 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 PPOXP50336 477 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 SERTAD4-AS1Q5TG53 156 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 FA2HQ7L5A8 372 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 FAM89BQ8N5H3 189 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 LEAP2Q969E1 77 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 G6PC2Q9NQR9 355 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 TMEM160Q9NX00 188 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 RCC2Q9P258 522 aaKnown RBP5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 DPM3Q9P2X0 92 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 HIGD1AQ9Y241 93 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 UFC1Q9Y3C8 167 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 AUP1Q9Y679 476 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 U3KQ87 197 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 ATRXP46100 2492 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 CREBBPQ92793 2442 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 TRIM77I1YAP6 450 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 SPNP16150 400 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 PSG7Q13046 419 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 ANKRD55Q3KP44 614 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 MS4A10Q96PG2 267 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 CEACAM18A8MTB9 384 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 ORM1P02763 201 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 TIMP3P35625 211 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 NPBWR2P48146 333 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 CRYBA2P53672 197 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 VAX1Q5SQQ9 334 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 SGK494Q96LW2 274 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 SPRR3Q9UBC9 169 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 CADP27708 2225 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 USF3Q68DE3 2245 aa5.87□□□□□ -1.47
SRGAP1-206ENST00000543397 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.86□□□□□ -1.471e-13■■■■■ 63.7
SRGAP1-206ENST00000543397 WNT9BO14905 357 aa5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 OR52E5Q8NH55 327 aa5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 AQP3Q92482 292 aa5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 MESP1Q9BRJ9 268 aa5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 NKX6-2Q9C056 277 aaPredicted RBP5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 WNK2Q9Y3S1 2297 aa5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 CHD5Q8TDI0 1954 aa5.86□□□□□ -1.47
SRGAP1-206ENST00000543397 ACACBO00763 2458 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms