RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 C1orf100Q5SVJ3 147 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 UTF1Q5T230 341 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 DCAF12Q5T6F0 453 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 FNDC7Q5VTL7 733 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 PARM1Q6UWI2 310 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.64□□□□□ -1.83
SNHG1-219ENST00000542112 Q6ZS49 121 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 Q6ZVH6 145 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 TMEM25Q86YD3 366 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 DEFB106AQ8N104 65 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 METTL27Q8N6F8 245 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-219ENST00000542112 NPWQ8N729 165 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 RBMXL3Q8N7X1 1067 aaKnown RBP3.64□□□□□ -1.83
SNHG1-219ENST00000542112 ZNF611Q8N823 705 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 B3GALNT2Q8NCR0 500 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 OR5D13Q8NGL4 314 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 OR10J6PQ8NGY7 276 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 OR10G6Q8NH81 332 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 RTN4IP1Q8WWV3 396 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-219ENST00000542112 COQ2Q96H96 371 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 DUX3Q96PT4 197 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 OR2A5Q96R48 311 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 SPAG8Q99932 426 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-219ENST00000542112 RBM24Q9BX46 236 aaKnown RBP3.64□□□□□ -1.83
SNHG1-219ENST00000542112 CHRNA10Q9GZZ6 450 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 PARP12Q9H0J9 701 aaKnown RBP3.64□□□□□ -1.83
SNHG1-219ENST00000542112 C5orf66Q9H5L9 145 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 CALHM2Q9HA72 323 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 SH2D2AQ9NP31 389 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 BPIFA1Q9NP55 256 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 ENY2Q9NPA8 101 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 PRTFDC1Q9NRG1 225 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 TAAR3PQ9P1P4 343 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 MDFICQ9P1T7 246 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 GNG13Q9P2W3 67 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 CLCF1Q9UBD9 225 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 RARRES3Q9UL19 164 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 TP53TG3Q9ULZ0 132 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 MRPS17Q9Y2R5 130 aaKnown RBP3.64□□□□□ -1.83
SNHG1-219ENST00000542112 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-219ENST00000542112 LOXL2Q9Y4K0 774 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 TIMM9Q9Y5J7 89 aa3.64□□□□□ -1.83
SNHG1-219ENST00000542112 MYO18AQ92614 2054 aaKnown RBP3.64□□□□□ -1.83
SNHG1-219ENST00000542112 HELZP42694 1942 aaKnown RBP3.64□□□□□ -1.83
SNHG1-219ENST00000542112 SCN8AQ9UQD0 1980 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 CHD3Q12873 2000 aaKnown RBP3.63□□□□□ -1.83
SNHG1-219ENST00000542112 TRGV10A0A0A0MS01 117 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 MDFIC2A0A1B0GVS7 189 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 A0A1W2PS18 150 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 NPIPB5A8MRT5 1133 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 PATE3B3GLJ2 98 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 ANKRD66B4E2M5 251 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 FAM90A26D6RGX4 464 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 SYS1-DBNDD2H3BUS1 97 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 H3BUT2 72 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-219ENST00000542112 SOCS1O15524 211 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 HCRTO43612 131 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 LDB3O75112 727 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 ZNF737O75373 536 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 CXorf1O96002 111 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 CRYAAP02489 173 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 ATP5G1P05496 136 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 SMIM13P0DJ93 91 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 CST5P28325 142 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-219ENST00000542112 HRH1P35367 487 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 G6PCP35575 357 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 ATP5G3P48201 142 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 LOXL3P58215 753 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 SUPT4H1P63272 117 aaKnown RBP3.63□□□□□ -1.83
SNHG1-219ENST00000542112 CX3CL1P78423 397 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 SP4Q02446 784 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 ATP5G2Q06055 141 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 GAGE2BQ13066 116 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 CATR1Q13166 79 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 FOXE3Q13461 319 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 HES1Q14469 280 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 NFATC4Q14934 902 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 CCL15Q16663 113 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 GAGE2EQ4V326 116 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 ZNF684Q5T5D7 378 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 LYRM7Q5U5X0 104 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 MORN3Q6PF18 240 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-219ENST00000542112 TMEM64Q6YI46 380 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 H1FNTQ75WM6 255 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-219ENST00000542112 ZNF627Q7L945 461 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 SPATA12Q7Z6I5 190 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 TRAPPC6BQ86SZ2 158 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 SPEM1Q8N4L4 309 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 BCORP1Q8N888 145 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 C8orf31Q8N9H6 132 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 ZFP62Q8NB50 900 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-219ENST00000542112 OR51H1Q8NH63 302 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 MAFAQ8NHW3 353 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-219ENST00000542112 NEU4Q8WWR8 484 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-219ENST00000542112 UBE2E3Q969T4 207 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 TMEM230Q96A57 120 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 RPEQ96AT9 228 aa3.63□□□□□ -1.83
SNHG1-219ENST00000542112 CHCHD1Q96BP2 118 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms