RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 ATP6V0CP27449 155 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 SLC16A13Q7RTY0 426 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 FGFBP3Q8TAT2 258 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 FBXL7Q9UJT9 491 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 PLXNA3P51805 1871 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 SPTBP11277 2137 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 PLXNA4Q9HCM2 1894 aa4.53□□□□□ -1.69
LRP6-203ENST00000538239 KBTBD11-OT1A0A1B0GTJ5 212 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 HMSDA8MTL9 139 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 C12orf77C9JDV5 145 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 HLA-DQB1P01920 261 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 TMEM30BQ3MIR4 351 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 UQCC3Q6UW78 93 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 TMEM18Q96B42 140 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 REPIN1Q9BWE0 567 aaKnown RBP4.52□□□□□ -1.69
LRP6-203ENST00000538239 SVILO95425 2214 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 CTXND1A0A1B0GTU2 59 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 PGPA6NDG6 321 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 ALX3O95076 343 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 PTBP3O95758 552 aaKnown RBP4.52□□□□□ -1.69
LRP6-203ENST00000538239 GPX1P07203 203 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 RPL7P18124 248 aaKnown RBP4.52□□□□□ -1.69
LRP6-203ENST00000538239 EMP1P54849 157 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 C17orf82Q86X59 251 aaPredicted RBP4.52□□□□□ -1.69
LRP6-203ENST00000538239 TOLLIPQ9H0E2 274 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 TGOLN2O43493 480 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 ADAM11O75078 769 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 EIF3GO75821 320 aaKnown RBP eCLIP4.52□□□□□ -1.69
LRP6-203ENST00000538239 AMY1AP04745 511 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 IL4P05112 153 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 MST1P26927 711 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 PSG9Q00887 426 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 DEFA6Q01524 100 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 NRN1LQ496H8 165 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 GTF3AQ92664 365 aaKnown RBP4.52□□□□□ -1.69
LRP6-203ENST00000538239 NPFFR1Q9GZQ6 430 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 IGHV1-46P01743 117 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 GPR183P32249 361 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 FOXG1P55316 489 aaPredicted RBP4.52□□□□□ -1.69
LRP6-203ENST00000538239 HIST1H1AQ02539 215 aaPredicted RBP4.52□□□□□ -1.69
LRP6-203ENST00000538239 TNFRSF9Q07011 255 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 CD69Q07108 199 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 ZNF146Q15072 292 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 GGNQ86UU5 652 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 BPIFA4PQ86YQ2 179 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 SLC25A38Q96DW6 304 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 CRIM1Q9NZV1 1036 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 FOXA2Q9Y261 457 aaPredicted RBP4.52□□□□□ -1.69
LRP6-203ENST00000538239 CLDN34H7C241 214 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 PLA2G10O15496 165 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 HTN3P15516 51 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 DSCR9P59020 149 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 BSXQ3C1V8 233 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 ZNF672Q499Z4 452 aaPredicted RBP4.52□□□□□ -1.69
LRP6-203ENST00000538239 AMMECR1LQ6DCA0 310 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 LINC00114Q6XXX2 140 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 NPIPB3Q92617 1050 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 NRIP2Q9BQI9 281 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 PRSS22Q9GZN4 317 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 RBM38Q9H0Z9 239 aaKnown RBP4.52□□□□□ -1.69
LRP6-203ENST00000538239 TCF19Q9Y242 345 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 CEP290O15078 2479 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 IGKV3OR2-268A0A0C4DH90 116 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 A0A0G2JK05 382 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 SCGB1C2P0DMR2 95 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 CX3CL1P78423 397 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 EIF4E3Q8N5X7 224 aaKnown RBP4.52□□□□□ -1.69
LRP6-203ENST00000538239 MDS2Q8NDY4 140 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 NEURL2Q9BR09 285 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 M0R2Z0 102 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 KBTBD11O94819 623 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 CA7P43166 264 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 KIR2DL2P43627 348 aaPredicted RBP4.52□□□□□ -1.69
LRP6-203ENST00000538239 TCTEX1D1Q8N7M0 179 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 BMPERQ8N8U9 685 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 LINC00312Q9Y6C7 94 aa4.52□□□□□ -1.69
LRP6-203ENST00000538239 IGLV3-32A0A0A0MS00 114 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 P2RY4P51582 365 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 FAM166AQ6J272 317 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 VMO1Q7Z5L0 202 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 FAM24BQ8N5W8 94 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 SGK494Q96LW2 274 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 PLSCR4Q9NRQ2 329 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 AP5S1Q9NUS5 200 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 WDR73Q6P4I2 378 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 ZNF880Q6PDB4 577 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 WDR82Q6UXN9 313 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 LYZL4Q96KX0 146 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 OPN4Q9UHM6 478 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 GPR132Q9UNW8 380 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 SELENOKQ9Y6D0 94 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 TEX50A0A1B0GTY4 177 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 IL18BPO95998 194 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 CA2P00918 260 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 HSPB1P04792 205 aaKnown RBP4.51□□□□□ -1.69
LRP6-203ENST00000538239 HKR1P10072 659 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 EFNA4P52798 201 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 DLK1P80370 383 aa4.51□□□□□ -1.69
LRP6-203ENST00000538239 MEF2CQ06413 473 aaPredicted RBP4.51□□□□□ -1.69
LRP6-203ENST00000538239 KLRD1Q13241 179 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms