RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 COA4Q9NYJ1 87 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 PEF1Q9UBV8 284 aaKnown RBP2.64□□□□□ -1.99
PTPRC-213ENST00000529828 KLK5Q9Y337 293 aaPredicted RBP2.64□□□□□ -1.99
PTPRC-213ENST00000529828 PEX16Q9Y5Y5 336 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 AQP12BA6NM10 295 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 PTGES3LE9PB15 166 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 J3QRE1 110 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 BMPR1BO00238 502 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 TUSC2O75896 110 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 FADS2O95864 444 aaKnown RBP2.64□□□□□ -1.99
PTPRC-213ENST00000529828 IGKV1-16P04430 117 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 FCGR1AP12314 374 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 ZNF93P35789 620 aaPredicted RBP2.64□□□□□ -1.99
PTPRC-213ENST00000529828 SCAND1P57086 179 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 SSBP2P81877 361 aaPredicted RBP2.64□□□□□ -1.99
PTPRC-213ENST00000529828 PJVKQ0ZLH3 352 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 FXYD3Q14802 87 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 TATDN3Q17R31 274 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 MPV17LQ2QL34 196 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 DEFB135Q30KP9 77 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 NHLRC3Q5JS37 347 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 KDM4DQ6B0I6 523 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 DMKNQ6E0U4 476 aaPredicted RBP2.64□□□□□ -1.99
PTPRC-213ENST00000529828 ZNF529Q6P280 563 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 ASCL4Q6XD76 172 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 AQP12AQ8IXF9 295 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 PACRGLQ8N7B6 248 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 BPIFCQ8NFQ6 507 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 OR4D10Q8NGI6 311 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 OR13C5Q8NGS8 318 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 OR5AK2Q8NH90 309 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 RNASE11Q8TAA1 199 aaKnown RBP2.64□□□□□ -1.99
PTPRC-213ENST00000529828 CPNE2Q96FN4 548 aaPredicted RBP2.64□□□□□ -1.99
PTPRC-213ENST00000529828 ALG8Q9BVK2 526 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 TPPP3Q9BW30 176 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 GGTLC1Q9BX51 225 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 S100A14Q9HCY8 104 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 TMEM140Q9NV12 185 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 RCC2Q9P258 522 aaKnown RBP2.64□□□□□ -1.99
PTPRC-213ENST00000529828 JPT1Q9UK76 154 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 RNF24Q9Y225 148 aa2.64□□□□□ -1.99
PTPRC-213ENST00000529828 MRPS7Q9Y2R9 242 aaKnown RBP2.64□□□□□ -1.99
PTPRC-213ENST00000529828 A0A0G2JLM5 398 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 TMEM212A6NML5 194 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 PPP5D1E7EU14 171 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 G3V2T6 193 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 XRCC3O43542 346 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 MRPS14O60783 128 aaKnown RBP2.63□□□□□ -1.99
PTPRC-213ENST00000529828 OR2A4O95047 310 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 CLEC3BP05452 202 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 GTF2F2P13984 249 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 S100PP25815 95 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 G0S2P27469 103 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 ALDH3B2P48448 385 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 TAS2R60P59551 318 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 RPS16P62249 146 aaKnown RBP2.63□□□□□ -1.99
PTPRC-213ENST00000529828 PPP3R1P63098 170 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 SLAQ13239 276 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 EXOSC2Q13868 293 aaKnown RBP2.63□□□□□ -1.99
PTPRC-213ENST00000529828 GPR176Q14439 515 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 DEFB114Q30KQ6 69 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 TMEM30BQ3MIR4 351 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 XAF1Q6GPH4 301 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 ZNF343Q6P1L6 599 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 ZNF562Q6V9R5 426 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 C19orf35Q6ZS72 473 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 AMIGO2Q86SJ2 522 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 LINC00596Q86U02 117 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 ACBD7Q8N6N7 88 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 OR8J1Q8NGP2 316 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 MRPL30Q8TCC3 161 aaKnown RBP2.63□□□□□ -1.99
PTPRC-213ENST00000529828 PHLDA1Q8WV24 401 aaPredicted RBP2.63□□□□□ -1.99
PTPRC-213ENST00000529828 FAM46BQ96A09 425 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 LGALS12Q96DT0 336 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 C12orf57Q99622 126 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 ZNF184Q99676 751 aaPredicted RBP2.63□□□□□ -1.99
PTPRC-213ENST00000529828 YTHDF1Q9BYJ9 559 aaKnown RBP2.63□□□□□ -1.99
PTPRC-213ENST00000529828 SELENOIQ9C0D9 397 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 TINAGL1Q9GZM7 467 aaPredicted RBP2.63□□□□□ -1.99
PTPRC-213ENST00000529828 RAB9BQ9NP90 201 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 IL36GQ9NZH8 169 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 KCNIP1Q9NZI2 227 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 PEMTQ9UBM1 199 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 CLEC2DQ9UHP7 191 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 DAPK2Q9UIK4 370 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 PRELID3BQ9Y3B1 194 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 WASHC3Q9Y3C0 194 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 MYCBP2O75592 4640 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 LOC102724200A0A096LPH7 203 aaPredicted RBP2.63□□□□□ -1.99
PTPRC-213ENST00000529828 A0A1W2PPK0 400 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 TCRBV3S1A0A5B6 114 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 OR5H14A6NHG9 310 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 C2orf70A6NJV1 201 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 SAC3D1A6NKF1 404 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 FAM90A23PA8MXZ1 464 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 YPEL1O60688 119 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 IGHV3-23P01764 117 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 CD3GP09693 182 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 T-ENOLP0DO92 83 aa2.63□□□□□ -1.99
PTPRC-213ENST00000529828 FOLR2P14207 255 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms