RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 PMP2P02689 132 aa11.09□□□□□ -0.63
CAPN1-216ENST00000528739 EIF4EP06730 217 aaKnown RBP11.09□□□□□ -0.63
CAPN1-216ENST00000528739 CRYGBP07316 175 aa11.09□□□□□ -0.63
CAPN1-216ENST00000528739 SAA1P0DJI8 122 aaPredicted RBP11.09□□□□□ -0.63
CAPN1-216ENST00000528739 ECI1P42126 302 aa11.09□□□□□ -0.63
CAPN1-216ENST00000528739 DGCR2P98153 550 aa11.09□□□□□ -0.63
CAPN1-216ENST00000528739 PRSS8Q16651 343 aa11.09□□□□□ -0.63
CAPN1-216ENST00000528739 C19orf54Q5BKX5 351 aa11.09□□□□□ -0.63
CAPN1-216ENST00000528739 MZT2AQ6P582 158 aa11.09□□□□□ -0.63
CAPN1-216ENST00000528739 ZNF66Q6ZN08 573 aa11.09□□□□□ -0.63
CAPN1-216ENST00000528739 SSX9Q7RTT3 188 aa11.09□□□□□ -0.63
CAPN1-216ENST00000528739 SNX29P2Q8IUI4 249 aa11.09□□□□□ -0.63
CAPN1-216ENST00000528739 VKORC1L1Q8N0U8 176 aa11.09□□□□□ -0.63
CAPN1-216ENST00000528739 POC5Q8NA72 575 aa11.09□□□□□ -0.63
CAPN1-216ENST00000528739 OR5H2Q8NGV7 314 aa11.09□□□□□ -0.63
CAPN1-216ENST00000528739 MYOZ3Q8TDC0 251 aa11.09□□□□□ -0.63
CAPN1-216ENST00000528739 TMEM68Q96MH6 324 aa11.09□□□□□ -0.63
CAPN1-216ENST00000528739 MRPS26Q9BYN8 205 aaKnown RBP11.09□□□□□ -0.63
CAPN1-216ENST00000528739 WI2-2373I1.2A0A1W2PRP0 233 aa11.08□□□□□ -0.64
CAPN1-216ENST00000528739 OVOL1O14753 267 aa11.08□□□□□ -0.64
CAPN1-216ENST00000528739 HPGDSO60760 199 aa11.08□□□□□ -0.64
CAPN1-216ENST00000528739 LY86O95711 162 aa11.08□□□□□ -0.64
CAPN1-216ENST00000528739 LGALS1P09382 135 aaKnown RBP11.08□□□□□ -0.64
CAPN1-216ENST00000528739 SMIM18P0DKX4 95 aa11.08□□□□□ -0.64
CAPN1-216ENST00000528739 RFX2P48378 723 aa11.08□□□□□ -0.64
CAPN1-216ENST00000528739 SLURP1P55000 103 aa11.08□□□□□ -0.64
CAPN1-216ENST00000528739 RUNX1Q01196 453 aa11.08□□□□□ -0.64
CAPN1-216ENST00000528739 GPR141Q7Z602 305 aa11.08□□□□□ -0.64
CAPN1-216ENST00000528739 MMD2Q8IY49 270 aa11.08□□□□□ -0.64
CAPN1-216ENST00000528739 DCUN1D4Q92564 292 aa11.08□□□□□ -0.64
CAPN1-216ENST00000528739 SNAPC3Q92966 411 aa11.08□□□□□ -0.64
CAPN1-216ENST00000528739 ZNF2Q9BSG1 426 aaPredicted RBP11.08□□□□□ -0.64
CAPN1-216ENST00000528739 NAA50Q9GZZ1 169 aaKnown RBP11.08□□□□□ -0.64
CAPN1-216ENST00000528739 IGHV4OR15-8A0A075B7B6 117 aa11.07□□□□□ -0.64
CAPN1-216ENST00000528739 A0A087WW49 117 aa11.07□□□□□ -0.64
CAPN1-216ENST00000528739 A0A0G2JLM5 398 aa11.07□□□□□ -0.64
CAPN1-216ENST00000528739 ANKRD34BA5PLL1 514 aa11.07□□□□□ -0.64
CAPN1-216ENST00000528739 DPPA5A6NC42 116 aa11.07□□□□□ -0.64
CAPN1-216ENST00000528739 K7EIL1 84 aa11.07□□□□□ -0.64
CAPN1-216ENST00000528739 SULT1C2O00338 296 aa11.07□□□□□ -0.64
CAPN1-216ENST00000528739 OR2A4O95047 310 aa11.07□□□□□ -0.64
CAPN1-216ENST00000528739 HRASP01112 189 aa11.07□□□□□ -0.64
CAPN1-216ENST00000528739 IGLV2-14P01704 120 aa11.07□□□□□ -0.64
CAPN1-216ENST00000528739 HSPB1P04792 205 aaKnown RBP11.07□□□□□ -0.64
CAPN1-216ENST00000528739 HLA-DMAP28067 261 aa11.07□□□□□ -0.64
CAPN1-216ENST00000528739 KIR2DS2P43631 304 aa11.07□□□□□ -0.64
CAPN1-216ENST00000528739 TSPAN5P62079 268 aa11.07□□□□□ -0.64
CAPN1-216ENST00000528739 EGFEM1PQ0D2K5 195 aa11.07□□□□□ -0.64
CAPN1-216ENST00000528739 CATR1Q13166 79 aa11.07□□□□□ -0.64
CAPN1-216ENST00000528739 FHL3Q13643 280 aa11.07□□□□□ -0.64
CAPN1-216ENST00000528739 AADACL3Q5VUY0 350 aa11.07□□□□□ -0.64
CAPN1-216ENST00000528739 ANKRD13BQ86YJ7 626 aa11.07□□□□□ -0.64
CAPN1-216ENST00000528739 SPAG16Q8N0X2 631 aa11.07□□□□□ -0.64
CAPN1-216ENST00000528739 ZBTB34Q8NCN2 500 aa11.07□□□□□ -0.64
CAPN1-216ENST00000528739 VSTM2AQ8TAG5 236 aa11.07□□□□□ -0.64
CAPN1-216ENST00000528739 GIMAP1Q8WWP7 306 aa11.07□□□□□ -0.64
CAPN1-216ENST00000528739 SRSF12Q8WXF0 261 aaKnown RBP11.07□□□□□ -0.64
CAPN1-216ENST00000528739 AP3S1Q92572 193 aa11.07□□□□□ -0.64
CAPN1-216ENST00000528739 RHOVQ96L33 236 aa11.07□□□□□ -0.64
CAPN1-216ENST00000528739 OR2A7Q96R45 310 aa11.07□□□□□ -0.64
CAPN1-216ENST00000528739 ZNF430Q9H8G1 570 aaPredicted RBP11.07□□□□□ -0.64
CAPN1-216ENST00000528739 NOTCH3Q9UM47 2321 aa11.06□□□□□ -0.64
CAPN1-216ENST00000528739 H3BUA1 57 aa11.06□□□□□ -0.64
CAPN1-216ENST00000528739 RAMP3O60896 148 aa11.06□□□□□ -0.64
CAPN1-216ENST00000528739 SAP30O75446 220 aa11.06□□□□□ -0.64
CAPN1-216ENST00000528739 APOA1P02647 267 aa11.06□□□□□ -0.64
CAPN1-216ENST00000528739 TAS2R46P59540 309 aa11.06□□□□□ -0.64
CAPN1-216ENST00000528739 DEFA5Q01523 94 aa11.06□□□□□ -0.64
CAPN1-216ENST00000528739 RNASE12Q5GAN4 147 aaKnown RBP11.06□□□□□ -0.64
CAPN1-216ENST00000528739 OVCH2Q7RTZ1 564 aa11.06□□□□□ -0.64
CAPN1-216ENST00000528739 OR6F1Q8NGZ6 308 aa11.06□□□□□ -0.64
CAPN1-216ENST00000528739 OR51H1Q8NH63 302 aa11.06□□□□□ -0.64
CAPN1-216ENST00000528739 DLX4Q92988 240 aaPredicted RBP11.06□□□□□ -0.64
CAPN1-216ENST00000528739 FYTTD1Q96QD9 318 aaKnown RBP11.06□□□□□ -0.64
CAPN1-216ENST00000528739 SPIN2AQ99865 258 aa11.06□□□□□ -0.64
CAPN1-216ENST00000528739 SPIN2BQ9BPZ2 258 aa11.06□□□□□ -0.64
CAPN1-216ENST00000528739 HRASLSQ9HDD0 168 aa11.06□□□□□ -0.64
CAPN1-216ENST00000528739 OR9G9P0C7N8 305 aa11.05□□□□□ -0.64
CAPN1-216ENST00000528739 ZNF182P17025 639 aaPredicted RBP11.05□□□□□ -0.64
CAPN1-216ENST00000528739 ELK1P19419 428 aa11.05□□□□□ -0.64
CAPN1-216ENST00000528739 SSBP2P81877 361 aaPredicted RBP11.05□□□□□ -0.64
CAPN1-216ENST00000528739 C10orf55Q5SWW7 151 aa11.05□□□□□ -0.64
CAPN1-216ENST00000528739 ASPHD1Q5U4P2 390 aa11.05□□□□□ -0.64
CAPN1-216ENST00000528739 ZNF818PQ6ZRF7 136 aa11.05□□□□□ -0.64
CAPN1-216ENST00000528739 BORCS5Q969J3 196 aa11.05□□□□□ -0.64
CAPN1-216ENST00000528739 CMTM3Q96MX0 182 aa11.05□□□□□ -0.64
CAPN1-216ENST00000528739 PRR25Q96S07 402 aa11.05□□□□□ -0.64
CAPN1-216ENST00000528739 AIFM2Q9BRQ8 373 aa11.05□□□□□ -0.64
CAPN1-216ENST00000528739 RANGRFQ9HD47 186 aaPredicted RBP11.05□□□□□ -0.64
CAPN1-216ENST00000528739 NOTCH1P46531 2555 aa11.05□□□□□ -0.64
CAPN1-216ENST00000528739 HMX3A6NHT5 357 aa11.04□□□□□ -0.64
CAPN1-216ENST00000528739 KBTBD11O94819 623 aa11.04□□□□□ -0.64
CAPN1-216ENST00000528739 GABARAPO95166 117 aa11.04□□□□□ -0.64
CAPN1-216ENST00000528739 PRH1P02810 166 aa11.04□□□□□ -0.64
CAPN1-216ENST00000528739 RPA2P15927 270 aa11.04□□□□□ -0.64
CAPN1-216ENST00000528739 HRH1P35367 487 aa11.04□□□□□ -0.64
CAPN1-216ENST00000528739 RPL27AP46776 148 aaKnown RBP11.04□□□□□ -0.64
CAPN1-216ENST00000528739 DYRK1AQ13627 763 aa11.04□□□□□ -0.64
CAPN1-216ENST00000528739 MSMO1Q15800 293 aa11.04□□□□□ -0.64
CAPN1-216ENST00000528739 DMBX1Q8NFW5 382 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms