RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 RPS16P62249 146 aaKnown RBP10.03□□□□□ -0.8
PDPN-210ENST00000513143 HES1Q14469 280 aa10.03□□□□□ -0.8
PDPN-210ENST00000513143 POU2AF1Q16633 256 aa10.03□□□□□ -0.8
PDPN-210ENST00000513143 FBLN7Q53RD9 439 aa10.03□□□□□ -0.8
PDPN-210ENST00000513143 ZNF695Q8IW36 515 aa10.03□□□□□ -0.8
PDPN-210ENST00000513143 SIGLECL1Q8N7X8 197 aa10.03□□□□□ -0.8
PDPN-210ENST00000513143 COQ8AQ8NI60 647 aa10.03□□□□□ -0.8
PDPN-210ENST00000513143 RBPMSQ93062 196 aaKnown RBP10.03□□□□□ -0.8
PDPN-210ENST00000513143 PHB2Q99623 299 aa10.03□□□□□ -0.8
PDPN-210ENST00000513143 AIFM2Q9BRQ8 373 aa10.03□□□□□ -0.8
PDPN-210ENST00000513143 TCF19Q9Y242 345 aa10.03□□□□□ -0.8
PDPN-210ENST00000513143 ALG5Q9Y673 324 aa10.03□□□□□ -0.8
PDPN-210ENST00000513143 ZFHX3Q15911 3703 aa10.03□□□□□ -0.8
PDPN-210ENST00000513143 PIGBOS1A0A0B4J2F0 54 aa10.02□□□□□ -0.81
PDPN-210ENST00000513143 A6NDX4 124 aa10.02□□□□□ -0.81
PDPN-210ENST00000513143 ATG12O94817 140 aa10.02□□□□□ -0.81
PDPN-210ENST00000513143 IGLV2-23P01705 113 aa10.02□□□□□ -0.81
PDPN-210ENST00000513143 IGHV4-59P01825 116 aa10.02□□□□□ -0.81
PDPN-210ENST00000513143 FAM157CP0CG43 387 aa10.02□□□□□ -0.81
PDPN-210ENST00000513143 TMEM11P17152 192 aa10.02□□□□□ -0.81
PDPN-210ENST00000513143 HNF4GQ14541 408 aa10.02□□□□□ -0.81
PDPN-210ENST00000513143 TMEM268Q5VZI3 342 aa10.02□□□□□ -0.81
PDPN-210ENST00000513143 LIN54Q6MZP7 749 aa10.02□□□□□ -0.81
PDPN-210ENST00000513143 CADM3Q8N126 398 aa10.02□□□□□ -0.81
PDPN-210ENST00000513143 C12orf45Q8N5I9 185 aaPredicted RBP10.02□□□□□ -0.81
PDPN-210ENST00000513143 OR8H1Q8NGG4 311 aa10.02□□□□□ -0.81
PDPN-210ENST00000513143 OR5R1Q8NH85 324 aa10.02□□□□□ -0.81
PDPN-210ENST00000513143 SSMEM1Q8WWF3 244 aa10.02□□□□□ -0.81
PDPN-210ENST00000513143 R3HDM4Q96D70 268 aa10.02□□□□□ -0.81
PDPN-210ENST00000513143 SEC22AQ96IW7 307 aa10.02□□□□□ -0.81
PDPN-210ENST00000513143 HARBI1Q96MB7 349 aa10.02□□□□□ -0.81
PDPN-210ENST00000513143 TSNAXQ99598 290 aaKnown RBP10.02□□□□□ -0.81
PDPN-210ENST00000513143 PLSCR3Q9NRY6 295 aa10.02□□□□□ -0.81
PDPN-210ENST00000513143 TNCP24821 2201 aa10.01□□□□□ -0.81
PDPN-210ENST00000513143 DUXBA0A1W2PPF3 345 aa10.01□□□□□ -0.81
PDPN-210ENST00000513143 DBX1A6NMT0 343 aa10.01□□□□□ -0.81
PDPN-210ENST00000513143 MARCH11A6NNE9 402 aa10.01□□□□□ -0.81
PDPN-210ENST00000513143 SPDEFO95238 335 aa10.01□□□□□ -0.81
PDPN-210ENST00000513143 KRASP01116 189 aa10.01□□□□□ -0.81
PDPN-210ENST00000513143 CNTFRP26992 372 aa10.01□□□□□ -0.81
PDPN-210ENST00000513143 G6PCP35575 357 aa10.01□□□□□ -0.81
PDPN-210ENST00000513143 F2RL1P55085 397 aa10.01□□□□□ -0.81
PDPN-210ENST00000513143 UBE2KP61086 200 aa10.01□□□□□ -0.81
PDPN-210ENST00000513143 PSG5Q15238 335 aa10.01□□□□□ -0.81
PDPN-210ENST00000513143 RBMS3Q6XE24 437 aaKnown RBP10.01□□□□□ -0.81
PDPN-210ENST00000513143 VKORC1L1Q8N0U8 176 aa10.01□□□□□ -0.81
PDPN-210ENST00000513143 TMEM86BQ8N661 226 aa10.01□□□□□ -0.81
PDPN-210ENST00000513143 SLC35G3Q8N808 338 aa10.01□□□□□ -0.81
PDPN-210ENST00000513143 NPBQ8NG41 125 aa10.01□□□□□ -0.81
PDPN-210ENST00000513143 RHOVQ96L33 236 aa10.01□□□□□ -0.81
PDPN-210ENST00000513143 RBM14Q96PK6 669 aaKnown RBP10.01□□□□□ -0.81
PDPN-210ENST00000513143 OR51J1Q9H342 316 aa10.01□□□□□ -0.81
PDPN-210ENST00000513143 PITPNC1Q9UKF7 332 aa10.01□□□□□ -0.81
PDPN-210ENST00000513143 POMT1Q9Y6A1 747 aa10.01□□□□□ -0.81
PDPN-210ENST00000513143 BTBD17A6NE02 478 aa10□□□□□ -0.81
PDPN-210ENST00000513143 NBR2O15453 112 aa10□□□□□ -0.81
PDPN-210ENST00000513143 HOXA3O43365 443 aaPredicted RBP10□□□□□ -0.81
PDPN-210ENST00000513143 NDUFA3O95167 84 aa10□□□□□ -0.81
PDPN-210ENST00000513143 IGKV1-5P01602 117 aa10□□□□□ -0.81
PDPN-210ENST00000513143 CRYGBP07316 175 aa10□□□□□ -0.81
PDPN-210ENST00000513143 IL6RP08887 468 aaPredicted RBP10□□□□□ -0.81
PDPN-210ENST00000513143 P0C879 139 aa10□□□□□ -0.81
PDPN-210ENST00000513143 SAA1P0DJI8 122 aaPredicted RBP10□□□□□ -0.81
PDPN-210ENST00000513143 VDAC1P21796 283 aa10□□□□□ -0.81
PDPN-210ENST00000513143 ERVK-16P61578 105 aa10□□□□□ -0.81
PDPN-210ENST00000513143 PRR20EP86478 221 aa10□□□□□ -0.81
PDPN-210ENST00000513143 PRR20CP86479 221 aa10□□□□□ -0.81
PDPN-210ENST00000513143 PRR20DP86480 221 aa10□□□□□ -0.81
PDPN-210ENST00000513143 PRR20BP86481 221 aa10□□□□□ -0.81
PDPN-210ENST00000513143 PRR20AP86496 221 aa10□□□□□ -0.81
PDPN-210ENST00000513143 MMDQ15546 238 aa10□□□□□ -0.81
PDPN-210ENST00000513143 LY6EQ16553 131 aa10□□□□□ -0.81
PDPN-210ENST00000513143 VMA21Q3ZAQ7 101 aa10□□□□□ -0.81
PDPN-210ENST00000513143 LYZL2Q7Z4W2 148 aa10□□□□□ -0.81
PDPN-210ENST00000513143 PUSL1Q8N0Z8 303 aaKnown RBP10□□□□□ -0.81
PDPN-210ENST00000513143 DMBX1Q8NFW5 382 aa10□□□□□ -0.81
PDPN-210ENST00000513143 LSM10Q969L4 123 aaKnown RBP10□□□□□ -0.81
PDPN-210ENST00000513143 C1RLQ9NZP8 487 aa10□□□□□ -0.81
PDPN-210ENST00000513143 MMP24Q9Y5R2 645 aa10□□□□□ -0.81
PDPN-210ENST00000513143 PLXNB1O43157 2135 aa9.99□□□□□ -0.81
PDPN-210ENST00000513143 A0A0G2JRQ6 117 aa9.99□□□□□ -0.81
PDPN-210ENST00000513143 RRHO14718 337 aa9.99□□□□□ -0.81
PDPN-210ENST00000513143 SLC25A17O43808 307 aa9.99□□□□□ -0.81
PDPN-210ENST00000513143 OR2F2O95006 317 aa9.99□□□□□ -0.81
PDPN-210ENST00000513143 HOXB5P09067 269 aa9.99□□□□□ -0.81
PDPN-210ENST00000513143 HLA-GP17693 338 aa9.99□□□□□ -0.81
PDPN-210ENST00000513143 AKR1C2P52895 323 aa9.99□□□□□ -0.81
PDPN-210ENST00000513143 NMSQ5H8A3 153 aa9.99□□□□□ -0.81
PDPN-210ENST00000513143 OR4A47Q6IF82 309 aa9.99□□□□□ -0.81
PDPN-210ENST00000513143 SSX9Q7RTT3 188 aa9.99□□□□□ -0.81
PDPN-210ENST00000513143 C16orf82Q7Z2V1 217 aa9.99□□□□□ -0.81
PDPN-210ENST00000513143 TMEM219Q86XT9 240 aa9.99□□□□□ -0.81
PDPN-210ENST00000513143 FAM219AQ8IW50 185 aa9.99□□□□□ -0.81
PDPN-210ENST00000513143 Q8N9W7 124 aa9.99□□□□□ -0.81
PDPN-210ENST00000513143 TEX45Q8NA69 505 aa9.99□□□□□ -0.81
PDPN-210ENST00000513143 UXS1Q8NBZ7 420 aa9.99□□□□□ -0.81
PDPN-210ENST00000513143 VSTM2AQ8TAG5 236 aa9.99□□□□□ -0.81
PDPN-210ENST00000513143 ZNF418Q8TF45 676 aaPredicted RBP9.99□□□□□ -0.81
PDPN-210ENST00000513143 RRNAD1Q96FB5 475 aaKnown RBP9.99□□□□□ -0.81
PDPN-210ENST00000513143 SLC25A33Q9BSK2 321 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms