RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 CNIH1O95406 144 aa10.54□□□□□ -0.72
SPCS3-204ENST00000513139 APOA1P02647 267 aa10.54□□□□□ -0.72
SPCS3-204ENST00000513139 CSN3P07498 182 aa10.54□□□□□ -0.72
SPCS3-204ENST00000513139 CD3GP09693 182 aa10.54□□□□□ -0.72
SPCS3-204ENST00000513139 MECP2P51608 486 aaKnown RBP10.54□□□□□ -0.72
SPCS3-204ENST00000513139 HTD2P86397 168 aa10.54□□□□□ -0.72
SPCS3-204ENST00000513139 PLGLAQ15195 96 aa10.54□□□□□ -0.72
SPCS3-204ENST00000513139 TATDN3Q17R31 274 aa10.54□□□□□ -0.72
SPCS3-204ENST00000513139 FAM71F2Q6NXP2 309 aa10.54□□□□□ -0.72
SPCS3-204ENST00000513139 ZNF562Q6V9R5 426 aa10.54□□□□□ -0.72
SPCS3-204ENST00000513139 PLEKHA3Q9HB20 300 aa10.54□□□□□ -0.72
SPCS3-204ENST00000513139 TAF9BQ9HBM6 251 aa10.54□□□□□ -0.72
SPCS3-204ENST00000513139 ZNF230Q9UIE0 474 aaPredicted RBP10.54□□□□□ -0.72
SPCS3-204ENST00000513139 IZUMO1RA6ND01 250 aa10.53□□□□□ -0.72
SPCS3-204ENST00000513139 NUPR2A6NF83 97 aa10.53□□□□□ -0.72
SPCS3-204ENST00000513139 FAM25AB3EWG3 89 aa10.53□□□□□ -0.72
SPCS3-204ENST00000513139 FAM25CB3EWG5 89 aa10.53□□□□□ -0.72
SPCS3-204ENST00000513139 FAM25GB3EWG6 89 aa10.53□□□□□ -0.72
SPCS3-204ENST00000513139 SSX5O60225 188 aa10.53□□□□□ -0.72
SPCS3-204ENST00000513139 YPEL1O60688 119 aa10.53□□□□□ -0.72
SPCS3-204ENST00000513139 RBBP9O75884 186 aa10.53□□□□□ -0.72
SPCS3-204ENST00000513139 SCGNO76038 276 aa10.53□□□□□ -0.72
SPCS3-204ENST00000513139 BRI3O95415 125 aa10.53□□□□□ -0.72
SPCS3-204ENST00000513139 GSTP1P09211 210 aaKnown RBP10.53□□□□□ -0.72
SPCS3-204ENST00000513139 SYNJ2BPP57105 145 aa10.53□□□□□ -0.72
SPCS3-204ENST00000513139 CD81P60033 236 aa10.53□□□□□ -0.72
SPCS3-204ENST00000513139 ARFRP1Q13795 201 aa10.53□□□□□ -0.72
SPCS3-204ENST00000513139 HACD4Q5VWC8 232 aa10.53□□□□□ -0.72
SPCS3-204ENST00000513139 ZNF880Q6PDB4 577 aa10.53□□□□□ -0.72
SPCS3-204ENST00000513139 MCFD2Q8NI22 146 aa10.53□□□□□ -0.72
SPCS3-204ENST00000513139 NUDCD2Q8WVJ2 157 aa10.53□□□□□ -0.72
SPCS3-204ENST00000513139 MAFIPQ8WZ33 124 aa10.53□□□□□ -0.72
SPCS3-204ENST00000513139 CMTM3Q96MX0 182 aa10.53□□□□□ -0.72
SPCS3-204ENST00000513139 YPEL2Q96QA6 119 aa10.53□□□□□ -0.72
SPCS3-204ENST00000513139 RNF5Q99942 180 aa10.53□□□□□ -0.72
SPCS3-204ENST00000513139 FAM103A1Q9BTL3 118 aaKnown RBP10.53□□□□□ -0.72
SPCS3-204ENST00000513139 C6orf62Q9GZU0 229 aaPredicted RBP10.53□□□□□ -0.72
SPCS3-204ENST00000513139 NXF2Q9GZY0 626 aaKnown RBP10.53□□□□□ -0.72
SPCS3-204ENST00000513139 RIMS4Q9H426 269 aaPredicted RBP10.53□□□□□ -0.72
SPCS3-204ENST00000513139 AUNIPQ9H7T9 357 aa10.53□□□□□ -0.72
SPCS3-204ENST00000513139 C12orf4Q9NQ89 552 aa10.53□□□□□ -0.72
SPCS3-204ENST00000513139 MBNL3Q9NUK0 354 aaKnown RBP10.53□□□□□ -0.72
SPCS3-204ENST00000513139 SLC2A8Q9NY64 477 aa10.53□□□□□ -0.72
SPCS3-204ENST00000513139 GAB2Q9UQC2 676 aa10.53□□□□□ -0.72
SPCS3-204ENST00000513139 MRPS7Q9Y2R9 242 aaKnown RBP10.53□□□□□ -0.72
SPCS3-204ENST00000513139 RYR1P21817 5038 aa10.52□□□□□ -0.72
SPCS3-204ENST00000513139 DNAH10Q8IVF4 4471 aa10.52□□□□□ -0.73
SPCS3-204ENST00000513139 SAA2-SAA4A0A096LPE2 208 aa10.52□□□□□ -0.73
SPCS3-204ENST00000513139 TRBV6-6A0A0A6YYG2 114 aa10.52□□□□□ -0.73
SPCS3-204ENST00000513139 A0A0A6YYH2 397 aa10.52□□□□□ -0.73
SPCS3-204ENST00000513139 OR5H14A6NHG9 310 aa10.52□□□□□ -0.73
SPCS3-204ENST00000513139 A6NJ64 397 aa10.52□□□□□ -0.73
SPCS3-204ENST00000513139 SAA2P0DJI9 122 aaPredicted RBP10.52□□□□□ -0.73
SPCS3-204ENST00000513139 MC5RP33032 325 aa10.52□□□□□ -0.73
SPCS3-204ENST00000513139 PPP1CCP36873 323 aaKnown RBP10.52□□□□□ -0.73
SPCS3-204ENST00000513139 TALDO1P37837 337 aa10.52□□□□□ -0.73
SPCS3-204ENST00000513139 OR3A3P47888 321 aa10.52□□□□□ -0.73
SPCS3-204ENST00000513139 TAS2R20P59543 309 aa10.52□□□□□ -0.73
SPCS3-204ENST00000513139 MRPS15P82914 257 aaKnown RBP10.52□□□□□ -0.73
SPCS3-204ENST00000513139 GNMTQ14749 295 aa10.52□□□□□ -0.73
SPCS3-204ENST00000513139 TMEM69Q5SWH9 247 aa10.52□□□□□ -0.73
SPCS3-204ENST00000513139 FAM131AQ6UXB0 335 aa10.52□□□□□ -0.73
SPCS3-204ENST00000513139 POC5Q8NA72 575 aa10.52□□□□□ -0.73
SPCS3-204ENST00000513139 OR52L2PQ8NGH6 319 aa10.52□□□□□ -0.73
SPCS3-204ENST00000513139 NEURL2Q9BR09 285 aa10.52□□□□□ -0.73
SPCS3-204ENST00000513139 Q9N2K0 584 aa10.52□□□□□ -0.73
SPCS3-204ENST00000513139 KCNIP1Q9NZI2 227 aa10.52□□□□□ -0.73
SPCS3-204ENST00000513139 ANKRD34BA5PLL1 514 aa10.51□□□□□ -0.73
SPCS3-204ENST00000513139 OR2A4O95047 310 aa10.51□□□□□ -0.73
SPCS3-204ENST00000513139 HLA-DQB1P01920 261 aa10.51□□□□□ -0.73
SPCS3-204ENST00000513139 FCER2P06734 321 aa10.51□□□□□ -0.73
SPCS3-204ENST00000513139 FCGR3AP08637 254 aa10.51□□□□□ -0.73
SPCS3-204ENST00000513139 SCTP09683 121 aa10.51□□□□□ -0.73
SPCS3-204ENST00000513139 AADACP22760 399 aa10.51□□□□□ -0.73
SPCS3-204ENST00000513139 GNG2P59768 71 aa10.51□□□□□ -0.73
SPCS3-204ENST00000513139 ARL6IP1Q15041 203 aa10.51□□□□□ -0.73
SPCS3-204ENST00000513139 CNIH2Q6PI25 160 aa10.51□□□□□ -0.73
SPCS3-204ENST00000513139 OR2AK2Q8NG84 335 aa10.51□□□□□ -0.73
SPCS3-204ENST00000513139 ZNF355PQ9NSJ1 428 aa10.51□□□□□ -0.73
SPCS3-204ENST00000513139 PIPOXQ9P0Z9 390 aa10.51□□□□□ -0.73
SPCS3-204ENST00000513139 EXTL2Q9UBQ6 330 aa10.51□□□□□ -0.73
SPCS3-204ENST00000513139 PEF1Q9UBV8 284 aaKnown RBP10.51□□□□□ -0.73
SPCS3-204ENST00000513139 IGKV1D-8A0A087WSZ0 117 aa10.5□□□□□ -0.73
SPCS3-204ENST00000513139 MEIS3P1A6NDR6 274 aa10.5□□□□□ -0.73
SPCS3-204ENST00000513139 CXorf65A6NEN9 183 aa10.5□□□□□ -0.73
SPCS3-204ENST00000513139 TNFSF8P32971 234 aa10.5□□□□□ -0.73
SPCS3-204ENST00000513139 HMGN3Q15651 99 aa10.5□□□□□ -0.73
SPCS3-204ENST00000513139 ZNF343Q6P1L6 599 aa10.5□□□□□ -0.73
SPCS3-204ENST00000513139 SNX29P2Q8IUI4 249 aa10.5□□□□□ -0.73
SPCS3-204ENST00000513139 RPP25LQ8N5L8 163 aaKnown RBP10.5□□□□□ -0.73
SPCS3-204ENST00000513139 DEFB125Q8N687 156 aa10.5□□□□□ -0.73
SPCS3-204ENST00000513139 GVQW1Q8N7I0 195 aa10.5□□□□□ -0.73
SPCS3-204ENST00000513139 GALMQ96C23 342 aa10.5□□□□□ -0.73
SPCS3-204ENST00000513139 IFI27L2Q9H2X8 130 aa10.5□□□□□ -0.73
SPCS3-204ENST00000513139 PEMTQ9UBM1 199 aa10.5□□□□□ -0.73
SPCS3-204ENST00000513139 METTL1Q9UBP6 276 aaKnown RBP10.5□□□□□ -0.73
SPCS3-204ENST00000513139 SLC23A1Q9UHI7 598 aa10.5□□□□□ -0.73
SPCS3-204ENST00000513139 WASHC3Q9Y3C0 194 aa10.5□□□□□ -0.73
SPCS3-204ENST00000513139 IGKV1-6A0A0C4DH72 117 aa10.49□□□□□ -0.73
SPCS3-204ENST00000513139 ZNF785A8K8V0 405 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms