RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 KBTBD11-OT1A0A1B0GTJ5 212 aa11.04□□□□□ -0.64
PCDHA4-202ENST00000512229 TM4SF5O14894 197 aa11.04□□□□□ -0.64
PCDHA4-202ENST00000512229 PTBP3O95758 552 aaKnown RBP11.04□□□□□ -0.64
PCDHA4-202ENST00000512229 GNG4P50150 75 aa11.04□□□□□ -0.64
PCDHA4-202ENST00000512229 QRFPP83859 136 aa11.04□□□□□ -0.64
PCDHA4-202ENST00000512229 MED13Q9UHV7 2174 aa11.04□□□□□ -0.64
PCDHA4-202ENST00000512229 F8VVB4 439 aa11.03□□□□□ -0.64
PCDHA4-202ENST00000512229 F8VWA3 439 aa11.03□□□□□ -0.64
PCDHA4-202ENST00000512229 LIPFP07098 398 aa11.03□□□□□ -0.64
PCDHA4-202ENST00000512229 SPP1P10451 314 aa11.03□□□□□ -0.64
PCDHA4-202ENST00000512229 LHFPL1Q86WI0 220 aa11.03□□□□□ -0.64
PCDHA4-202ENST00000512229 SIRT7Q9NRC8 400 aa11.03□□□□□ -0.64
PCDHA4-202ENST00000512229 COA4Q9NYJ1 87 aa11.03□□□□□ -0.64
PCDHA4-202ENST00000512229 TRAV14DV4A0A0A6YYC5 116 aa11.03□□□□□ -0.64
PCDHA4-202ENST00000512229 RNF222A6NCQ9 220 aa11.03□□□□□ -0.64
PCDHA4-202ENST00000512229 HSBP1L1C9JCN9 74 aa11.03□□□□□ -0.64
PCDHA4-202ENST00000512229 SCGB1D1O95968 90 aa11.03□□□□□ -0.64
PCDHA4-202ENST00000512229 USF1P22415 310 aaPredicted RBP11.03□□□□□ -0.64
PCDHA4-202ENST00000512229 ZNF497Q6ZNH5 498 aa11.03□□□□□ -0.64
PCDHA4-202ENST00000512229 PIP4P1Q86T03 277 aa11.03□□□□□ -0.64
PCDHA4-202ENST00000512229 NAT8Q9UHE5 227 aa11.03□□□□□ -0.64
PCDHA4-202ENST00000512229 SLC25A15Q9Y619 301 aa11.03□□□□□ -0.64
PCDHA4-202ENST00000512229 LRP11Q86VZ4 500 aa11.03□□□□□ -0.64
PCDHA4-202ENST00000512229 CBLN2Q8IUK8 224 aa11.03□□□□□ -0.64
PCDHA4-202ENST00000512229 XKRY2A2RUG3 117 aa11.02□□□□□ -0.64
PCDHA4-202ENST00000512229 C17orf98A8MV24 154 aa11.02□□□□□ -0.64
PCDHA4-202ENST00000512229 TSTD3H0UI37 97 aa11.02□□□□□ -0.64
PCDHA4-202ENST00000512229 ISOC2Q96AB3 205 aa11.02□□□□□ -0.64
PCDHA4-202ENST00000512229 BARX1Q9HBU1 254 aaPredicted RBP11.02□□□□□ -0.64
PCDHA4-202ENST00000512229 PXMP4Q9Y6I8 212 aa11.02□□□□□ -0.64
PCDHA4-202ENST00000512229 CHEK1O14757 476 aa11.02□□□□□ -0.65
PCDHA4-202ENST00000512229 CLEC7AQ9BXN2 247 aa11.02□□□□□ -0.65
PCDHA4-202ENST00000512229 TMEM56-RWDD3S4R434 201 aa11.02□□□□□ -0.65
PCDHA4-202ENST00000512229 H3BQ15 152 aa11.02□□□□□ -0.65
PCDHA4-202ENST00000512229 CLN5O75503 358 aa11.02□□□□□ -0.65
PCDHA4-202ENST00000512229 CXorf1O96002 111 aa11.02□□□□□ -0.65
PCDHA4-202ENST00000512229 OR10J1P30954 320 aa11.02□□□□□ -0.65
PCDHA4-202ENST00000512229 ARL16Q0P5N6 197 aa11.02□□□□□ -0.65
PCDHA4-202ENST00000512229 ZNF146Q15072 292 aa11.02□□□□□ -0.65
PCDHA4-202ENST00000512229 PDPNQ86YL7 162 aa11.02□□□□□ -0.65
PCDHA4-202ENST00000512229 C5orf42Q9H799 3197 aa11.02□□□□□ -0.65
PCDHA4-202ENST00000512229 PAX5Q02548 391 aa11.02□□□□□ -0.65
PCDHA4-202ENST00000512229 HCP5Q6MZN7 132 aa11.02□□□□□ -0.65
PCDHA4-202ENST00000512229 MYPOPQ86VE0 399 aaPredicted RBP11.02□□□□□ -0.65
PCDHA4-202ENST00000512229 STXBP6Q8NFX7 210 aa11.02□□□□□ -0.65
PCDHA4-202ENST00000512229 BSCL2Q96G97 398 aaPredicted RBP11.02□□□□□ -0.65
PCDHA4-202ENST00000512229 METTL1Q9UBP6 276 aaKnown RBP11.02□□□□□ -0.65
PCDHA4-202ENST00000512229 LOC105371242A0A075B767 164 aa11.01□□□□□ -0.65
PCDHA4-202ENST00000512229 CEACAM18A8MTB9 384 aa11.01□□□□□ -0.65
PCDHA4-202ENST00000512229 BCL2P10415 239 aa11.01□□□□□ -0.65
PCDHA4-202ENST00000512229 MEF2CQ06413 473 aaPredicted RBP11.01□□□□□ -0.65
PCDHA4-202ENST00000512229 Q8WTZ3 238 aa11.01□□□□□ -0.65
PCDHA4-202ENST00000512229 FAM122AQ96E09 287 aa11.01□□□□□ -0.65
PCDHA4-202ENST00000512229 FAM210BQ96KR6 192 aa11.01□□□□□ -0.65
PCDHA4-202ENST00000512229 IGHV3-21A0A0B4J1V1 117 aa11.01□□□□□ -0.65
PCDHA4-202ENST00000512229 SRRM5B3KS81 715 aa11.01□□□□□ -0.65
PCDHA4-202ENST00000512229 M0QZ24 198 aa11.01□□□□□ -0.65
PCDHA4-202ENST00000512229 LILRA1O75019 489 aa11.01□□□□□ -0.65
PCDHA4-202ENST00000512229 GALR1P47211 349 aa11.01□□□□□ -0.65
PCDHA4-202ENST00000512229 COLCA1Q6ZS62 124 aa11.01□□□□□ -0.65
PCDHA4-202ENST00000512229 ZNF439Q8NDP4 499 aa11.01□□□□□ -0.65
PCDHA4-202ENST00000512229 PTPRQQ9UMZ3 2332 aa11.01□□□□□ -0.65
PCDHA4-202ENST00000512229 IGSF23A1L1A6 192 aa11.01□□□□□ -0.65
PCDHA4-202ENST00000512229 DANCRP0C864 163 aa11.01□□□□□ -0.65
PCDHA4-202ENST00000512229 RAB4AP20338 218 aa11.01□□□□□ -0.65
PCDHA4-202ENST00000512229 DLK1P80370 383 aa11.01□□□□□ -0.65
PCDHA4-202ENST00000512229 C10orf113Q5VZT2 155 aa11.01□□□□□ -0.65
PCDHA4-202ENST00000512229 TMEM37Q8WXS4 190 aa11.01□□□□□ -0.65
PCDHA4-202ENST00000512229 RNF126Q9BV68 326 aa11.01□□□□□ -0.65
PCDHA4-202ENST00000512229 TOLLIPQ9H0E2 274 aa11.01□□□□□ -0.65
PCDHA4-202ENST00000512229 SH3BGRL3Q9H299 93 aa11.01□□□□□ -0.65
PCDHA4-202ENST00000512229 NOTCH3Q9UM47 2321 aa11□□□□□ -0.65
PCDHA4-202ENST00000512229 TFF1P04155 84 aa11□□□□□ -0.65
PCDHA4-202ENST00000512229 NAPSAO96009 420 aa11□□□□□ -0.65
PCDHA4-202ENST00000512229 F12P00748 615 aaPredicted RBP11□□□□□ -0.65
PCDHA4-202ENST00000512229 FAM157CP0CG43 387 aa11□□□□□ -0.65
PCDHA4-202ENST00000512229 CFPP27918 469 aa11□□□□□ -0.65
PCDHA4-202ENST00000512229 SELENOTP62341 195 aa11□□□□□ -0.65
PCDHA4-202ENST00000512229 LY6DQ14210 128 aa11□□□□□ -0.65
PCDHA4-202ENST00000512229 MBNL2Q5VZF2 373 aaKnown RBP11□□□□□ -0.65
PCDHA4-202ENST00000512229 LINC00312Q9Y6C7 94 aa11□□□□□ -0.65
PCDHA4-202ENST00000512229 MFSD2BA6NFX1 497 aa11□□□□□ -0.65
PCDHA4-202ENST00000512229 B4DEV8 164 aa11□□□□□ -0.65
PCDHA4-202ENST00000512229 IGHV1-46P01743 117 aa11□□□□□ -0.65
PCDHA4-202ENST00000512229 NTF4P34130 210 aa11□□□□□ -0.65
PCDHA4-202ENST00000512229 FHITP49789 147 aa11□□□□□ -0.65
PCDHA4-202ENST00000512229 FAM74A3Q4VXF1 159 aa11□□□□□ -0.65
PCDHA4-202ENST00000512229 OR8I2Q8N0Y5 310 aa11□□□□□ -0.65
PCDHA4-202ENST00000512229 PNKDQ8N490 385 aa11□□□□□ -0.65
PCDHA4-202ENST00000512229 CYB561D1Q8N8Q1 229 aa11□□□□□ -0.65
PCDHA4-202ENST00000512229 PERPQ96FX8 193 aa11□□□□□ -0.65
PCDHA4-202ENST00000512229 QTRT1Q9BXR0 403 aaKnown RBP11□□□□□ -0.65
PCDHA4-202ENST00000512229 NIT2Q9NQR4 276 aa11□□□□□ -0.65
PCDHA4-202ENST00000512229 H0YIZ8 118 aa10.99□□□□□ -0.65
PCDHA4-202ENST00000512229 CORTO00230 105 aa10.99□□□□□ -0.65
PCDHA4-202ENST00000512229 PDE6DO43924 150 aa10.99□□□□□ -0.65
PCDHA4-202ENST00000512229 PSPNO60542 156 aa10.99□□□□□ -0.65
PCDHA4-202ENST00000512229 OR5I1Q13606 314 aa10.99□□□□□ -0.65
PCDHA4-202ENST00000512229 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.99□□□□□ -0.65
PCDHA4-202ENST00000512229 RNF138Q8WVD3 245 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms