RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 THOC3Q96J01 351 aaKnown RBP2.36□□□□□ -2.03
NEDD4-204ENST00000503468 METTL7AQ9H8H3 244 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 C20orf141Q9NUB4 165 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 LRP12Q9Y561 859 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 RYR2Q92736 4967 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 SERTM2A0A1B0GWG4 89 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 ANKRD30BLA7E2S9 258 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 SMAD9O15198 467 aaKnown RBP2.36□□□□□ -2.03
NEDD4-204ENST00000503468 YPEL1O60688 119 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 ZNF737O75373 536 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 FCGR2AP12318 317 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 FCGR2BP31994 310 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-204ENST00000503468 CATR1Q13166 79 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 MMDQ15546 238 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 FAM69BQ5VUD6 431 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 LCN15Q6UWW0 184 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 PQLC2Q6ZP29 291 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 BPIFA4PQ86YQ2 179 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 OR2AE1Q8NHA4 323 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 ZNRF2Q8NHG8 242 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 C11orf52Q96A22 123 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 YPEL2Q96QA6 119 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 EDA2RQ9HAV5 297 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 PLEKHJ1Q9NW61 149 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 TMEM160Q9NX00 188 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 TAS2R4Q9NYW5 299 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 ABCA7Q8IZY2 2146 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 SPTBN1Q01082 2364 aaKnown RBP2.36□□□□□ -2.03
NEDD4-204ENST00000503468 A0A0G2JN53 185 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 ISLRO14498 428 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 XRCC2O43543 280 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 SLC16A7O60669 478 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 ZNF121P58317 390 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-204ENST00000503468 RAC3P60763 192 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 RPS15P62841 145 aaKnown RBP2.36□□□□□ -2.03
NEDD4-204ENST00000503468 VWC2Q2TAL6 325 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 C16orf82Q7Z2V1 217 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 PRR22Q8IZ63 422 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 LILRA3Q8N6C8 439 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-204ENST00000503468 OR1L6Q8NGR2 347 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 OR2AJ1Q8NGZ0 328 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 ST8SIA1Q92185 356 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 TMEM167BQ9NRX6 74 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 MRPL16Q9NX20 251 aaKnown RBP2.36□□□□□ -2.03
NEDD4-204ENST00000503468 CGGBP1Q9UFW8 167 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-204ENST00000503468 CYSLTR1Q9Y271 337 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 FCF1Q9Y324 198 aaKnown RBP2.36□□□□□ -2.03
NEDD4-204ENST00000503468 LAMA1P25391 3075 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 hADV38S2A0JD32 116 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 IGLC7A0M8Q6 106 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 SIVA1O15304 175 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 OR1D2P34982 312 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 DYNLT3P51808 116 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 SSBP2P81877 361 aaPredicted RBP2.35□□□□□ -2.03
NEDD4-204ENST00000503468 RUNX1Q01196 453 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 TMEM187Q14656 261 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 DUX4L9Q6RFH8 374 aaPredicted RBP2.35□□□□□ -2.03
NEDD4-204ENST00000503468 UNQ5815/PRO19632Q6UWF5 114 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 Q6ZPA2 131 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 HSD11B1LQ7Z5J1 315 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 TAF15Q92804 592 aaKnown RBP eCLIP2.35□□□□□ -2.03
NEDD4-204ENST00000503468 CENPMQ9NSP4 180 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 DEPPQ9NTK1 212 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 IL36BQ9NZH7 164 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 ZNF257Q9Y2Q1 563 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 FREM3P0C091 2139 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 CNOT1A5YKK6 2376 aaKnown RBP2.35□□□□□ -2.03
NEDD4-204ENST00000503468 LOC105371242A0A075B767 164 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 A0A0G2JMM0 328 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 A0A1B0GVT2 93 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 A0A1W2PPB8 328 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 ZC3H12DA2A288 527 aaKnown RBP2.35□□□□□ -2.03
NEDD4-204ENST00000503468 KIR3DP1A8MWS1 328 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 FNDC10F2Z333 226 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 C3orf80F5H4A9 247 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 EFNA2O43921 213 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 KLK2P20151 261 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 FUT3P21217 361 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 G6PCP35575 357 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 MALLQ13021 153 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 LRRC75BQ2VPJ9 315 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 ATP5L2Q7Z4Y8 100 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 SPRED2Q7Z698 418 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 LHFPL4Q7Z7J7 247 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 BOD1L2Q8IYS8 172 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 ST6GALNAC3Q8NDV1 305 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 RERGQ96A58 199 aaPredicted RBP2.35□□□□□ -2.03
NEDD4-204ENST00000503468 MSI2Q96DH6 328 aaKnown RBP2.35□□□□□ -2.03
NEDD4-204ENST00000503468 ZNF479Q96JC4 524 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 FER1L6-AS2Q96M78 137 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 RNF208Q9H0X6 261 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 DOPEY2Q9Y3R5 2298 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 TEX15Q9BXT5 2789 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 SHISA9B4DS77 424 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 H0Y980 276 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 CDX4O14627 284 aaPredicted RBP2.35□□□□□ -2.03
NEDD4-204ENST00000503468 SMPD2O60906 423 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 RHBDL1O75783 438 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 TTRP02766 147 aa2.35□□□□□ -2.03
NEDD4-204ENST00000503468 CRYGCP07315 174 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms