RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 TGIF2-C20orf24A0A0A6YYL0 155 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 IGLV1-36A0A0B4J1U3 117 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 TRBV9A0A0B4J1U6 114 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 ZNF503-AS2A6NEH8 195 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 OR6C6A6NF89 314 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 DHRS7CA6NNS2 312 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 ZNF705GA8MUZ8 300 aaPredicted RBP4.29□□□□□ -1.72
HTT-202ENST00000502820 PRR32B1ATL7 298 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 MS4A18H0YCH9 400 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 H7BYZ3 331 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 TOMM40O96008 361 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 IFNA5P01569 189 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 CSN2P05814 226 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 CELA3BP08861 270 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 QDPRP09417 244 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 WNT2P09544 360 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 CECR9P0C854 216 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 HLA-DOBP13765 273 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 ZNF823P16415 610 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 ZNF20P17024 532 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 MSR1P21757 451 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 CCL1P22362 96 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 ZNF93P35789 620 aaPredicted RBP4.29□□□□□ -1.72
HTT-202ENST00000502820 GNALP38405 381 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 GNG10P50151 68 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 DAP3P51398 398 aaKnown RBP4.29□□□□□ -1.72
HTT-202ENST00000502820 CNN1P51911 297 aaKnown RBP4.29□□□□□ -1.72
HTT-202ENST00000502820 CEBPGP53567 150 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 CLDN17P56750 224 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 CCL8P80075 99 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 EWSR1Q01844 656 aaKnown RBP eCLIP4.29□□□□□ -1.72
HTT-202ENST00000502820 UNC119Q13432 240 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 ICAM4Q14773 271 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 SRSF7Q16629 238 aaKnown RBP eCLIP4.29□□□□□ -1.72
HTT-202ENST00000502820 ATP6V1FQ16864 119 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 MS4A18Q3C1V0 323 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 NRN1LQ496H8 165 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 PHYHD1Q5SRE7 291 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 AADACL3Q5VUY0 350 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 NCR3LG1Q68D85 454 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 SPSB3Q6PJ21 355 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 TMEM182Q6ZP80 229 aaPredicted RBP4.29□□□□□ -1.72
HTT-202ENST00000502820 LIAT1Q6ZQX7 453 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 C5orf24Q7Z6I8 188 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 MYPOPQ86VE0 399 aaPredicted RBP4.29□□□□□ -1.72
HTT-202ENST00000502820 LYG1Q8N1E2 194 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 OR2C3Q8N628 320 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 CSNK2A3Q8NEV1 391 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 OR4S1Q8NGB4 309 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 OR51A4Q8NGJ6 313 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 OR5L1Q8NGL2 311 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 OR13C9Q8NGT0 318 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 OR4X1Q8NH49 305 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 ZNF519Q8TB69 540 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 NPRL2Q8WTW4 380 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 RNF133Q8WVZ7 376 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 PP6455Q8WZ26 134 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 ZNF837Q96EG3 531 aaPredicted RBP4.29□□□□□ -1.72
HTT-202ENST00000502820 SMIM12Q96EX1 92 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 SLC35E1Q96K37 410 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 HIST1H2AAQ96QV6 131 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 ATP5SQ99766 215 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 TTTY10Q9BZA0 68 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 LPAR5Q9H1C0 372 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 OR10A2Q9H208 303 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 TXNIPQ9H3M7 391 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 MS4A5Q9H3V2 200 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 RBKSQ9H477 322 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 GPR35Q9HC97 309 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 MSL2Q9HCI7 577 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 MANBALQ9NQG1 85 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 NECAP2Q9NVZ3 263 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 PLEK2Q9NYT0 353 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 EHFQ9NZC4 300 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 C1RLQ9NZP8 487 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 GSKIPQ9P0R6 139 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 HSF4Q9ULV5 492 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 KLHDC2Q9Y2U9 406 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 LRP12Q9Y561 859 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 TIMM9Q9Y5J7 89 aa4.29□□□□□ -1.72
HTT-202ENST00000502820 BIRC6Q9NR09 4857 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 PLPP3O14495 311 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 DHHO43323 396 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 SYNGR3O43761 229 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 KBTBD11O94819 623 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 HPRT1P00492 218 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 NGFP01138 241 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 HLA-DQA2P01906 255 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 REG1AP05451 166 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 PFN1P07737 140 aaKnown RBP4.28□□□□□ -1.72
HTT-202ENST00000502820 DBHP09172 617 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 SNRPCP09234 159 aaKnown RBP4.28□□□□□ -1.72
HTT-202ENST00000502820 IGHV4-38-2P0DP08 117 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 RAC2P15153 192 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 ATP6V0CP27449 155 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 G0S2P27469 103 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 S100GP29377 79 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 BRS3P32247 399 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 PPP1CCP36873 323 aaKnown RBP4.28□□□□□ -1.72
HTT-202ENST00000502820 MDH2P40926 338 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms