RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 SAPCD1Q5SSQ6 148 aa1.9□□□□□ -2.11
SMC4-218ENST00000486711 C1orf194Q5T5A4 169 aa1.9□□□□□ -2.11
SMC4-218ENST00000486711 OR10K2Q6IF99 312 aa1.9□□□□□ -2.11
SMC4-218ENST00000486711 CD200R1LQ6Q8B3 271 aa1.9□□□□□ -2.11
SMC4-218ENST00000486711 GPHB5Q86YW7 130 aa1.9□□□□□ -2.11
SMC4-218ENST00000486711 GID4Q8IVV7 300 aa1.9□□□□□ -2.11
SMC4-218ENST00000486711 RNASE11Q8TAA1 199 aaKnown RBP1.9□□□□□ -2.11
SMC4-218ENST00000486711 RNASE6Q93091 150 aaKnown RBP1.9□□□□□ -2.11
SMC4-218ENST00000486711 DIRAS2Q96HU8 199 aa1.9□□□□□ -2.11
SMC4-218ENST00000486711 PARVGQ9HBI0 331 aa1.9□□□□□ -2.11
SMC4-218ENST00000486711 GPR84Q9NQS5 396 aa1.9□□□□□ -2.11
SMC4-218ENST00000486711 EVC2Q86UK5 1308 aa1.9□□□□□ -2.11
SMC4-218ENST00000486711 MAP3K5Q99683 1374 aa1.89□□□□□ -2.11
SMC4-218ENST00000486711 IGHV1-69-2A0A0G2JMI3 117 aa1.89□□□□□ -2.11
SMC4-218ENST00000486711 ARRDC5A6NEK1 342 aa1.89□□□□□ -2.11
SMC4-218ENST00000486711 J3QKU1 62 aa1.89□□□□□ -2.11
SMC4-218ENST00000486711 J3QQQ9 107 aa1.89□□□□□ -2.11
SMC4-218ENST00000486711 CCR7P32248 378 aa1.89□□□□□ -2.11
SMC4-218ENST00000486711 RPL26P61254 145 aaKnown RBP1.89□□□□□ -2.11
SMC4-218ENST00000486711 DEFB103AP81534 67 aa1.89□□□□□ -2.11
SMC4-218ENST00000486711 LRRC75BQ2VPJ9 315 aa1.89□□□□□ -2.11
SMC4-218ENST00000486711 DCANP1Q8TF63 244 aa1.89□□□□□ -2.11
SMC4-218ENST00000486711 PTH2Q96A98 100 aa1.89□□□□□ -2.11
SMC4-218ENST00000486711 KLF6Q99612 283 aaPredicted RBP1.89□□□□□ -2.11
SMC4-218ENST00000486711 SPZ1Q9BXG8 430 aa1.89□□□□□ -2.11
SMC4-218ENST00000486711 CXorf21Q9HAI6 301 aa1.89□□□□□ -2.11
SMC4-218ENST00000486711 AK3Q9UIJ7 227 aa1.89□□□□□ -2.11
SMC4-218ENST00000486711 ANAPC10Q9UM13 185 aa1.89□□□□□ -2.11
SMC4-218ENST00000486711 RPL26L1Q9UNX3 145 aaKnown RBP1.89□□□□□ -2.11
SMC4-218ENST00000486711 HHLA3Q9XRX5 114 aa1.89□□□□□ -2.11
SMC4-218ENST00000486711 LSM5Q9Y4Y9 91 aaKnown RBP1.89□□□□□ -2.11
SMC4-218ENST00000486711 PXMP4Q9Y6I8 212 aa1.89□□□□□ -2.11
SMC4-218ENST00000486711 TRAV41A0A0B4J266 112 aa1.88□□□□□ -2.11
SMC4-218ENST00000486711 OR4C45A6NMZ5 311 aa1.88□□□□□ -2.11
SMC4-218ENST00000486711 CREBL2O60519 120 aaPredicted RBP1.88□□□□□ -2.11
SMC4-218ENST00000486711 KRT75O95678 551 aa1.88□□□□□ -2.11
SMC4-218ENST00000486711 TCL1AP56279 114 aa1.88□□□□□ -2.11
SMC4-218ENST00000486711 NAA20P61599 178 aa1.88□□□□□ -2.11
SMC4-218ENST00000486711 EMX1Q04741 257 aaPredicted RBP1.88□□□□□ -2.11
SMC4-218ENST00000486711 PRDX4Q13162 271 aa1.88□□□□□ -2.11
SMC4-218ENST00000486711 HES1Q14469 280 aa1.88□□□□□ -2.11
SMC4-218ENST00000486711 MIAQ16674 131 aa1.88□□□□□ -2.11
SMC4-218ENST00000486711 COQ5Q5HYK3 327 aa1.88□□□□□ -2.11
SMC4-218ENST00000486711 CCDC122Q5T0U0 273 aa1.88□□□□□ -2.11
SMC4-218ENST00000486711 UMODL1-AS1Q8N2C9 162 aa1.88□□□□□ -2.11
SMC4-218ENST00000486711 SLC22A24Q8N4F4 322 aa1.88□□□□□ -2.11
SMC4-218ENST00000486711 ZNF675Q8TD23 568 aa1.88□□□□□ -2.11
SMC4-218ENST00000486711 OPTNQ96CV9 577 aa1.88□□□□□ -2.11
SMC4-218ENST00000486711 TTTY13Q9BZ97 58 aa1.88□□□□□ -2.11
SMC4-218ENST00000486711 NUP160Q12769 1436 aa1.88□□□□□ -2.11
SMC4-218ENST00000486711 MYO9BQ13459 2157 aa1.88□□□□□ -2.11
SMC4-218ENST00000486711 IGLV3-9A0A075B6K5 115 aa1.87□□□□□ -2.11
SMC4-218ENST00000486711 A0A0G2JQZ4 141 aa1.87□□□□□ -2.11
SMC4-218ENST00000486711 A0A1B0GV50 99 aa1.87□□□□□ -2.11
SMC4-218ENST00000486711 EVPLLA8MZ36 301 aa1.87□□□□□ -2.11
SMC4-218ENST00000486711 TGOLN2O43493 480 aa1.87□□□□□ -2.11
SMC4-218ENST00000486711 KLRC4O43908 158 aa1.87□□□□□ -2.11
SMC4-218ENST00000486711 AHSA1O95433 338 aa1.87□□□□□ -2.11
SMC4-218ENST00000486711 FAM228BP0C875 321 aa1.87□□□□□ -2.11
SMC4-218ENST00000486711 PEBP1P30086 187 aaKnown RBP1.87□□□□□ -2.11
SMC4-218ENST00000486711 ALDH3A1P30838 453 aa1.87□□□□□ -2.11
SMC4-218ENST00000486711 CA5AP35218 305 aa1.87□□□□□ -2.11
SMC4-218ENST00000486711 CCR2P41597 374 aa1.87□□□□□ -2.11
SMC4-218ENST00000486711 HAAOP46952 286 aa1.87□□□□□ -2.11
SMC4-218ENST00000486711 REG1BP48304 166 aa1.87□□□□□ -2.11
SMC4-218ENST00000486711 RAP1GDS1P52306 607 aa1.87□□□□□ -2.11
SMC4-218ENST00000486711 RPL30P62888 115 aaKnown RBP1.87□□□□□ -2.11
SMC4-218ENST00000486711 CAV1Q03135 178 aa1.87□□□□□ -2.11
SMC4-218ENST00000486711 OTOGLQ3ZCN5 2332 aa1.87□□□□□ -2.11
SMC4-218ENST00000486711 ZNF550Q7Z398 422 aa1.87□□□□□ -2.11
SMC4-218ENST00000486711 TBC1D19Q8N5T2 526 aa1.87□□□□□ -2.11
SMC4-218ENST00000486711 MNS1Q8NEH6 495 aa1.87□□□□□ -2.11
SMC4-218ENST00000486711 ASB17Q8WXJ9 295 aa1.87□□□□□ -2.11
SMC4-218ENST00000486711 PRO2289Q9P1D8 64 aa1.87□□□□□ -2.11
SMC4-218ENST00000486711 PRELID1Q9Y255 219 aa1.87□□□□□ -2.11
SMC4-218ENST00000486711 MYO16Q9Y6X6 1858 aa1.87□□□□□ -2.11
SMC4-218ENST00000486711 RTEL1-TNFRSF6BF6WH68 1400 aa1.86□□□□□ -2.11
SMC4-218ENST00000486711 TMEM269A0A1B0GVZ9 245 aa1.86□□□□□ -2.11
SMC4-218ENST00000486711 PCNX2A6NKB5 2137 aa1.86□□□□□ -2.11
SMC4-218ENST00000486711 RFPL4AA6NLU0 287 aa1.86□□□□□ -2.11
SMC4-218ENST00000486711 RFPL4AL1F8VTS6 287 aa1.86□□□□□ -2.11
SMC4-218ENST00000486711 M0R036 132 aa1.86□□□□□ -2.11
SMC4-218ENST00000486711 KCNK1O00180 336 aa1.86□□□□□ -2.11
SMC4-218ENST00000486711 IFNA5P01569 189 aa1.86□□□□□ -2.11
SMC4-218ENST00000486711 CCL1P22362 96 aa1.86□□□□□ -2.11
SMC4-218ENST00000486711 MAP2K4P45985 399 aa1.86□□□□□ -2.11
SMC4-218ENST00000486711 MARCKSL1P49006 195 aa1.86□□□□□ -2.11
SMC4-218ENST00000486711 EMP1P54849 157 aa1.86□□□□□ -2.11
SMC4-218ENST00000486711 POLR2GP62487 172 aaKnown RBP eCLIP1.86□□□□□ -2.11
SMC4-218ENST00000486711 UBE2IP63279 158 aaKnown RBP1.86□□□□□ -2.11
SMC4-218ENST00000486711 RELAQ04206 551 aa1.86□□□□□ -2.11
SMC4-218ENST00000486711 Q6ZTI0 123 aa1.86□□□□□ -2.11
SMC4-218ENST00000486711 ROPN1LQ96C74 230 aa1.86□□□□□ -2.11
SMC4-218ENST00000486711 GUCA1BQ9UMX6 200 aa1.86□□□□□ -2.11
SMC4-218ENST00000486711 ANGPT4Q9Y264 503 aa1.86□□□□□ -2.11
SMC4-218ENST00000486711 COQ4Q9Y3A0 265 aa1.86□□□□□ -2.11
SMC4-218ENST00000486711 TIMM9Q9Y5J7 89 aa1.86□□□□□ -2.11
SMC4-218ENST00000486711 ADGRB3O60242 1522 aa1.86□□□□□ -2.11
SMC4-218ENST00000486711 TRPM6Q9BX84 2022 aa1.85□□□□□ -2.11
SMC4-218ENST00000486711 IGHV3-64A0A075B6Q5 118 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms