RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 CNTFRP26992 372 aa12.62□□□□□ -0.39
APOE-205ENST00000485628 RAB25P57735 213 aa12.62□□□□□ -0.39
APOE-205ENST00000485628 OR2B11Q5JQS5 317 aa12.62□□□□□ -0.39
APOE-205ENST00000485628 FAM71E2Q8N5Q1 922 aa12.62□□□□□ -0.39
APOE-205ENST00000485628 Q8N9W7 124 aa12.62□□□□□ -0.39
APOE-205ENST00000485628 OR8H1Q8NGG4 311 aa12.62□□□□□ -0.39
APOE-205ENST00000485628 ZDHHC16Q969W1 377 aa12.62□□□□□ -0.39
APOE-205ENST00000485628 VPREB3Q9UKI3 123 aa12.62□□□□□ -0.39
APOE-205ENST00000485628 PLXNB1O43157 2135 aa12.61□□□□□ -0.39
APOE-205ENST00000485628 SNRPGP15A8MWD9 76 aa12.61□□□□□ -0.39
APOE-205ENST00000485628 H7C2Y5 167 aa12.61□□□□□ -0.39
APOE-205ENST00000485628 SPDEFO95238 335 aa12.61□□□□□ -0.39
APOE-205ENST00000485628 IGKV1-5P01602 117 aa12.61□□□□□ -0.39
APOE-205ENST00000485628 TRIM16LQ309B1 348 aa12.61□□□□□ -0.39
APOE-205ENST00000485628 C16orf82Q7Z2V1 217 aa12.61□□□□□ -0.39
APOE-205ENST00000485628 OR52B4Q8NGK2 314 aa12.61□□□□□ -0.39
APOE-205ENST00000485628 ZNF431Q8TF32 576 aaPredicted RBP12.61□□□□□ -0.39
APOE-205ENST00000485628 SEC22CQ9BRL7 303 aa12.61□□□□□ -0.39
APOE-205ENST00000485628 BEX1Q9HBH7 125 aa12.61□□□□□ -0.39
APOE-205ENST00000485628 NF1P21359 2839 aa12.6□□□□□ -0.39
APOE-205ENST00000485628 DNAJC9-AS1A6NH13 148 aa12.6□□□□□ -0.39
APOE-205ENST00000485628 FGF16O43320 207 aa12.6□□□□□ -0.39
APOE-205ENST00000485628 CHST1O43916 411 aa12.6□□□□□ -0.39
APOE-205ENST00000485628 HRASP01112 189 aa12.6□□□□□ -0.39
APOE-205ENST00000485628 HLA-AP01891 365 aaKnown RBP12.6□□□□□ -0.39
APOE-205ENST00000485628 SERPINE2P07093 398 aa12.6□□□□□ -0.39
APOE-205ENST00000485628 FGF2P09038 288 aa12.6□□□□□ -0.39
APOE-205ENST00000485628 NQO2P16083 231 aa12.6□□□□□ -0.39
APOE-205ENST00000485628 TMEM11P17152 192 aa12.6□□□□□ -0.39
APOE-205ENST00000485628 UBE2KP61086 200 aa12.6□□□□□ -0.39
APOE-205ENST00000485628 RPS16P62249 146 aaKnown RBP12.6□□□□□ -0.39
APOE-205ENST00000485628 PSG5Q15238 335 aa12.6□□□□□ -0.39
APOE-205ENST00000485628 C11orf88Q6PI97 169 aa12.6□□□□□ -0.39
APOE-205ENST00000485628 TEX45Q8NA69 505 aa12.6□□□□□ -0.39
APOE-205ENST00000485628 RBPMSQ93062 196 aaKnown RBP12.6□□□□□ -0.39
APOE-205ENST00000485628 RHOVQ96L33 236 aa12.6□□□□□ -0.39
APOE-205ENST00000485628 HARBI1Q96MB7 349 aa12.6□□□□□ -0.39
APOE-205ENST00000485628 CHIAQ9BZP6 476 aa12.6□□□□□ -0.39
APOE-205ENST00000485628 BET1LQ9NYM9 111 aa12.6□□□□□ -0.39
APOE-205ENST00000485628 PRR13Q9NZ81 148 aa12.6□□□□□ -0.39
APOE-205ENST00000485628 PITPNC1Q9UKF7 332 aa12.6□□□□□ -0.39
APOE-205ENST00000485628 A0A0G2JRQ6 117 aa12.59□□□□□ -0.39
APOE-205ENST00000485628 DUXBA0A1W2PPF3 345 aa12.59□□□□□ -0.39
APOE-205ENST00000485628 MARCH11A6NNE9 402 aa12.59□□□□□ -0.39
APOE-205ENST00000485628 RRHO14718 337 aa12.59□□□□□ -0.39
APOE-205ENST00000485628 SHOXO15266 292 aa12.59□□□□□ -0.39
APOE-205ENST00000485628 NBR2O15453 112 aa12.59□□□□□ -0.39
APOE-205ENST00000485628 DHFRP00374 187 aa12.59□□□□□ -0.39
APOE-205ENST00000485628 SAA1P0DJI8 122 aaPredicted RBP12.59□□□□□ -0.39
APOE-205ENST00000485628 ANXA3P12429 323 aa12.59□□□□□ -0.39
APOE-205ENST00000485628 VAMP1P23763 118 aa12.59□□□□□ -0.39
APOE-205ENST00000485628 SRPXP78539 464 aa12.59□□□□□ -0.39
APOE-205ENST00000485628 HNF4GQ14541 408 aa12.59□□□□□ -0.39
APOE-205ENST00000485628 TATDN3Q17R31 274 aa12.59□□□□□ -0.39
APOE-205ENST00000485628 AARDQ4LEZ3 155 aa12.59□□□□□ -0.39
APOE-205ENST00000485628 C4orf46Q504U0 113 aa12.59□□□□□ -0.39
APOE-205ENST00000485628 NMSQ5H8A3 153 aa12.59□□□□□ -0.39
APOE-205ENST00000485628 Q6ZNX1 250 aa12.59□□□□□ -0.39
APOE-205ENST00000485628 LGI3Q8N145 548 aa12.59□□□□□ -0.39
APOE-205ENST00000485628 C5orf56Q8N8D9 126 aa12.59□□□□□ -0.39
APOE-205ENST00000485628 ZNF418Q8TF45 676 aaPredicted RBP12.59□□□□□ -0.39
APOE-205ENST00000485628 LSM10Q969L4 123 aaKnown RBP12.59□□□□□ -0.39
APOE-205ENST00000485628 R3HDM4Q96D70 268 aa12.59□□□□□ -0.39
APOE-205ENST00000485628 TSNAXQ99598 290 aaKnown RBP12.59□□□□□ -0.39
APOE-205ENST00000485628 AIFM2Q9BRQ8 373 aa12.59□□□□□ -0.39
APOE-205ENST00000485628 SLC25A33Q9BSK2 321 aa12.59□□□□□ -0.39
APOE-205ENST00000485628 SIGLEC9Q9Y336 463 aa12.59□□□□□ -0.39
APOE-205ENST00000485628 HLA-GP17693 338 aa12.58□□□□□ -0.4
APOE-205ENST00000485628 SSBP2P81877 361 aaPredicted RBP12.58□□□□□ -0.4
APOE-205ENST00000485628 CBX3Q13185 183 aa12.58□□□□□ -0.4
APOE-205ENST00000485628 HES1Q14469 280 aa12.58□□□□□ -0.4
APOE-205ENST00000485628 LY6EQ16553 131 aa12.58□□□□□ -0.4
APOE-205ENST00000485628 C5orf64Q2M2E5 130 aa12.58□□□□□ -0.4
APOE-205ENST00000485628 TMEM219Q86XT9 240 aa12.58□□□□□ -0.4
APOE-205ENST00000485628 VKORC1L1Q8N0U8 176 aa12.58□□□□□ -0.4
APOE-205ENST00000485628 TMEM167AQ8TBQ9 72 aa12.58□□□□□ -0.4
APOE-205ENST00000485628 KRASP01116 189 aa12.57□□□□□ -0.4
APOE-205ENST00000485628 RNASE1P07998 156 aaKnown RBP12.57□□□□□ -0.4
APOE-205ENST00000485628 VDAC1P21796 283 aa12.57□□□□□ -0.4
APOE-205ENST00000485628 G6PCP35575 357 aa12.57□□□□□ -0.4
APOE-205ENST00000485628 RPL15P61313 204 aaKnown RBP12.57□□□□□ -0.4
APOE-205ENST00000485628 UBA52P62987 128 aaKnown RBP12.57□□□□□ -0.4
APOE-205ENST00000485628 MMDQ15546 238 aa12.57□□□□□ -0.4
APOE-205ENST00000485628 TMEM268Q5VZI3 342 aa12.57□□□□□ -0.4
APOE-205ENST00000485628 OR4A47Q6IF82 309 aa12.57□□□□□ -0.4
APOE-205ENST00000485628 RBMS3Q6XE24 437 aaKnown RBP12.57□□□□□ -0.4
APOE-205ENST00000485628 Q6ZRM9 215 aa12.57□□□□□ -0.4
APOE-205ENST00000485628 LYZL2Q7Z4W2 148 aa12.57□□□□□ -0.4
APOE-205ENST00000485628 FAM219AQ8IW50 185 aa12.57□□□□□ -0.4
APOE-205ENST00000485628 SLC35G3Q8N808 338 aa12.57□□□□□ -0.4
APOE-205ENST00000485628 OR4A5Q8NH83 315 aa12.57□□□□□ -0.4
APOE-205ENST00000485628 CASTOR1Q8WTX7 329 aa12.57□□□□□ -0.4
APOE-205ENST00000485628 TPSG1Q9NRR2 321 aa12.57□□□□□ -0.4
APOE-205ENST00000485628 C1RLQ9NZP8 487 aa12.57□□□□□ -0.4
APOE-205ENST00000485628 MOB4Q9Y3A3 225 aa12.57□□□□□ -0.4
APOE-205ENST00000485628 MMP24Q9Y5R2 645 aa12.57□□□□□ -0.4
APOE-205ENST00000485628 ALG5Q9Y673 324 aa12.57□□□□□ -0.4
APOE-205ENST00000485628 TET2Q6N021 2002 aaPredicted RBP12.56□□□□□ -0.4
APOE-205ENST00000485628 PIGBOS1A0A0B4J2F0 54 aa12.56□□□□□ -0.4
APOE-205ENST00000485628 M0QZK8 103 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms