RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 DEPPQ9NTK1 212 aa9.89□□□□□ -0.83
VTI1A-205ENST00000483122 V9GYV3 84 aa9.89□□□□□ -0.83
VTI1A-205ENST00000483122 LOC102724200A0A096LPH7 203 aaPredicted RBP9.88□□□□□ -0.83
VTI1A-205ENST00000483122 A0A1W2PRS3 328 aa9.88□□□□□ -0.83
VTI1A-205ENST00000483122 LRRC30A6NM36 301 aa9.88□□□□□ -0.83
VTI1A-205ENST00000483122 G3V3Y1 287 aa9.88□□□□□ -0.83
VTI1A-205ENST00000483122 S1PR2O95136 353 aa9.88□□□□□ -0.83
VTI1A-205ENST00000483122 CLDN14O95500 239 aa9.88□□□□□ -0.83
VTI1A-205ENST00000483122 SRIP30626 198 aa9.88□□□□□ -0.83
VTI1A-205ENST00000483122 RPL19P84098 196 aaKnown RBP9.88□□□□□ -0.83
VTI1A-205ENST00000483122 TMEM136Q6ZRR5 245 aa9.88□□□□□ -0.83
VTI1A-205ENST00000483122 SPACA9Q96E40 222 aaPredicted RBP9.88□□□□□ -0.83
VTI1A-205ENST00000483122 FGF21Q9NSA1 209 aa9.88□□□□□ -0.83
VTI1A-205ENST00000483122 TRBV9A0A0B4J1U6 114 aa9.88□□□□□ -0.83
VTI1A-205ENST00000483122 ZFAND5O76080 213 aa9.88□□□□□ -0.83
VTI1A-205ENST00000483122 MYF5P13349 255 aa9.88□□□□□ -0.83
VTI1A-205ENST00000483122 CCR5P51681 352 aa9.88□□□□□ -0.83
VTI1A-205ENST00000483122 RPL31P62899 125 aaKnown RBP9.88□□□□□ -0.83
VTI1A-205ENST00000483122 TMEM249Q2WGJ8 235 aa9.88□□□□□ -0.83
VTI1A-205ENST00000483122 DCAF12Q5T6F0 453 aa9.88□□□□□ -0.83
VTI1A-205ENST00000483122 MUC15Q8N387 334 aa9.88□□□□□ -0.83
VTI1A-205ENST00000483122 TSTD1Q8NFU3 115 aa9.88□□□□□ -0.83
VTI1A-205ENST00000483122 RAB1CQ92928 201 aa9.88□□□□□ -0.83
VTI1A-205ENST00000483122 SPSB4Q96A44 273 aa9.88□□□□□ -0.83
VTI1A-205ENST00000483122 DLL3Q9NYJ7 618 aa9.88□□□□□ -0.83
VTI1A-205ENST00000483122 CHCHD2Q9Y6H1 151 aaPredicted RBP9.88□□□□□ -0.83
VTI1A-205ENST00000483122 LAMA1P25391 3075 aa9.88□□□□□ -0.83
VTI1A-205ENST00000483122 OR5B21A6NL26 309 aa9.87□□□□□ -0.83
VTI1A-205ENST00000483122 DKK1O94907 266 aa9.87□□□□□ -0.83
VTI1A-205ENST00000483122 P0C879 139 aa9.87□□□□□ -0.83
VTI1A-205ENST00000483122 IGLL1P15814 213 aa9.87□□□□□ -0.83
VTI1A-205ENST00000483122 FKBP2P26885 142 aaKnown RBP9.87□□□□□ -0.83
VTI1A-205ENST00000483122 SRD5A2P31213 254 aa9.87□□□□□ -0.83
VTI1A-205ENST00000483122 CXCL12P48061 93 aa9.87□□□□□ -0.83
VTI1A-205ENST00000483122 ARG2P78540 354 aa9.87□□□□□ -0.83
VTI1A-205ENST00000483122 RHOGP84095 191 aa9.87□□□□□ -0.83
VTI1A-205ENST00000483122 CEACAM16Q2WEN9 425 aa9.87□□□□□ -0.83
VTI1A-205ENST00000483122 ZNF718Q3SXZ3 478 aa9.87□□□□□ -0.83
VTI1A-205ENST00000483122 SLC23A3Q6PIS1 610 aa9.87□□□□□ -0.83
VTI1A-205ENST00000483122 VASH2Q86V25 355 aa9.87□□□□□ -0.83
VTI1A-205ENST00000483122 C17orf82Q86X59 251 aaPredicted RBP9.87□□□□□ -0.83
VTI1A-205ENST00000483122 OR5B3Q8NH48 314 aa9.87□□□□□ -0.83
VTI1A-205ENST00000483122 NEUROG1Q92886 237 aa9.87□□□□□ -0.83
VTI1A-205ENST00000483122 BORCS7Q96B45 105 aa9.87□□□□□ -0.83
VTI1A-205ENST00000483122 EAF1Q96JC9 268 aaPredicted RBP9.87□□□□□ -0.83
VTI1A-205ENST00000483122 COL25A1Q9BXS0 654 aaPredicted RBP9.87□□□□□ -0.83
VTI1A-205ENST00000483122 CSTL1Q9H114 145 aa9.87□□□□□ -0.83
VTI1A-205ENST00000483122 CDC42EP3Q9UKI2 254 aa9.87□□□□□ -0.83
VTI1A-205ENST00000483122 TRIOO75962 3097 aa9.87□□□□□ -0.83
VTI1A-205ENST00000483122 NCOR1O75376 2440 aa9.87□□□□□ -0.83
VTI1A-205ENST00000483122 IGHV1OR21-1A0A087WYE8 117 aa9.87□□□□□ -0.83
VTI1A-205ENST00000483122 A0A1W2PPC4 97 aa9.87□□□□□ -0.83
VTI1A-205ENST00000483122 BMPR1BO00238 502 aa9.87□□□□□ -0.83
VTI1A-205ENST00000483122 REG1AP05451 166 aa9.87□□□□□ -0.83
VTI1A-205ENST00000483122 CCL2P13500 99 aa9.87□□□□□ -0.83
VTI1A-205ENST00000483122 TMEM11P17152 192 aa9.87□□□□□ -0.83
VTI1A-205ENST00000483122 CCNOP22674 350 aa9.87□□□□□ -0.83
VTI1A-205ENST00000483122 RPL30P62888 115 aaKnown RBP9.87□□□□□ -0.83
VTI1A-205ENST00000483122 IGFBP7Q16270 282 aa9.87□□□□□ -0.83
VTI1A-205ENST00000483122 FOXB1Q99853 325 aa9.87□□□□□ -0.83
VTI1A-205ENST00000483122 C1QTNF5Q9BXJ0 243 aa9.87□□□□□ -0.83
VTI1A-205ENST00000483122 C19orf25Q9UFG5 118 aaPredicted RBP9.87□□□□□ -0.83
VTI1A-205ENST00000483122 WDFY3Q8IZQ1 3526 aa9.87□□□□□ -0.83
VTI1A-205ENST00000483122 CABIN1Q9Y6J0 2220 aa9.86□□□□□ -0.83
VTI1A-205ENST00000483122 ZNF891A8MT65 544 aaPredicted RBP9.86□□□□□ -0.83
VTI1A-205ENST00000483122 NPIPB11E5RHQ5 1161 aa9.86□□□□□ -0.83
VTI1A-205ENST00000483122 STAG3L2P0CL84 134 aa9.86□□□□□ -0.83
VTI1A-205ENST00000483122 STAG3L3P0CL85 134 aa9.86□□□□□ -0.83
VTI1A-205ENST00000483122 TCL1AP56279 114 aa9.86□□□□□ -0.83
VTI1A-205ENST00000483122 C19orf35Q6ZS72 473 aa9.86□□□□□ -0.83
VTI1A-205ENST00000483122 PNKDQ8N490 385 aa9.86□□□□□ -0.83
VTI1A-205ENST00000483122 CPT1CQ8TCG5 803 aa9.86□□□□□ -0.83
VTI1A-205ENST00000483122 RLN3Q8WXF3 142 aa9.86□□□□□ -0.83
VTI1A-205ENST00000483122 ST6GALNAC6Q969X2 333 aa9.86□□□□□ -0.83
VTI1A-205ENST00000483122 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.86□□□□□ -0.83
VTI1A-205ENST00000483122 WDR83OSQ9Y284 106 aa9.86□□□□□ -0.83
VTI1A-205ENST00000483122 BDP1A6H8Y1 2624 aa9.86□□□□□ -0.83
VTI1A-205ENST00000483122 C15orf62A8K5M9 175 aa9.86□□□□□ -0.83
VTI1A-205ENST00000483122 ZIC3O60481 467 aa9.86□□□□□ -0.83
VTI1A-205ENST00000483122 FXYD3Q14802 87 aa9.86□□□□□ -0.83
VTI1A-205ENST00000483122 CEACAM21Q3KPI0 293 aa9.86□□□□□ -0.83
VTI1A-205ENST00000483122 Q56UQ5 140 aa9.86□□□□□ -0.83
VTI1A-205ENST00000483122 FAM53AQ6NSI3 398 aaPredicted RBP9.86□□□□□ -0.83
VTI1A-205ENST00000483122 TMEM105Q8N8V8 129 aa9.86□□□□□ -0.83
VTI1A-205ENST00000483122 C5orf30Q96GV9 206 aa9.86□□□□□ -0.83
VTI1A-205ENST00000483122 OR2D2Q9H210 308 aa9.86□□□□□ -0.83
VTI1A-205ENST00000483122 KMT2EQ8IZD2 1858 aa9.86□□□□□ -0.83
VTI1A-205ENST00000483122 TRAV9-2A0A087WT02 112 aa9.85□□□□□ -0.83
VTI1A-205ENST00000483122 TMEM238C9JI98 176 aa9.85□□□□□ -0.83
VTI1A-205ENST00000483122 TAX1BP3O14907 124 aa9.85□□□□□ -0.83
VTI1A-205ENST00000483122 CD1BP29016 333 aa9.85□□□□□ -0.83
VTI1A-205ENST00000483122 CX3CL1P78423 397 aa9.85□□□□□ -0.83
VTI1A-205ENST00000483122 MIC13Q5XKP0 118 aa9.85□□□□□ -0.83
VTI1A-205ENST00000483122 MRPL54Q6P161 138 aaKnown RBP9.85□□□□□ -0.83
VTI1A-205ENST00000483122 CLEC2AQ6UVW9 174 aa9.85□□□□□ -0.83
VTI1A-205ENST00000483122 FAM58AQ8N1B3 248 aa9.85□□□□□ -0.83
VTI1A-205ENST00000483122 ZNF808Q8N4W9 903 aaPredicted RBP9.85□□□□□ -0.83
VTI1A-205ENST00000483122 ZNF439Q8NDP4 499 aa9.85□□□□□ -0.83
VTI1A-205ENST00000483122 TXNDC17Q9BRA2 123 aa9.85□□□□□ -0.83
VTI1A-205ENST00000483122 RNASE7Q9H1E1 156 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms