RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 FAM106AQ4KMX7 169 aa8.39□□□□□ -1.07
TTC28-206ENST00000480563 C1orf100Q5SVJ3 147 aa8.39□□□□□ -1.07
TTC28-206ENST00000480563 GLT8D1Q68CQ7 371 aa8.39□□□□□ -1.07
TTC28-206ENST00000480563 GGHQ92820 318 aa8.39□□□□□ -1.07
TTC28-206ENST00000480563 SPIN2AQ99865 258 aa8.39□□□□□ -1.07
TTC28-206ENST00000480563 SPIN2BQ9BPZ2 258 aa8.39□□□□□ -1.07
TTC28-206ENST00000480563 OR2D2Q9H210 308 aa8.39□□□□□ -1.07
TTC28-206ENST00000480563 FBXL7Q9UJT9 491 aa8.39□□□□□ -1.07
TTC28-206ENST00000480563 TRAV25A0A0B4J276 109 aa8.38□□□□□ -1.07
TTC28-206ENST00000480563 TMEM14DPA8MWL7 114 aa8.38□□□□□ -1.07
TTC28-206ENST00000480563 RGS10O43665 173 aa8.38□□□□□ -1.07
TTC28-206ENST00000480563 ACTL6BO94805 426 aa8.38□□□□□ -1.07
TTC28-206ENST00000480563 IGHV3-23P01764 117 aa8.38□□□□□ -1.07
TTC28-206ENST00000480563 CDK1P06493 297 aa8.38□□□□□ -1.07
TTC28-206ENST00000480563 CELP19835 753 aa8.38□□□□□ -1.07
TTC28-206ENST00000480563 MAPK3P27361 379 aaPredicted RBP8.38□□□□□ -1.07
TTC28-206ENST00000480563 ARL3P36405 182 aa8.38□□□□□ -1.07
TTC28-206ENST00000480563 SERPINB10P48595 397 aa8.38□□□□□ -1.07
TTC28-206ENST00000480563 WNT4P56705 351 aa8.38□□□□□ -1.07
TTC28-206ENST00000480563 QRFPP83859 136 aa8.38□□□□□ -1.07
TTC28-206ENST00000480563 RBM48Q5RL73 367 aaKnown RBP8.38□□□□□ -1.07
TTC28-206ENST00000480563 BTNL8Q6UX41 500 aa8.38□□□□□ -1.07
TTC28-206ENST00000480563 CLEC19AQ6UXS0 136 aa8.38□□□□□ -1.07
TTC28-206ENST00000480563 RBPMS2Q6ZRY4 209 aaKnown RBP8.38□□□□□ -1.07
TTC28-206ENST00000480563 SLC25A42Q86VD7 318 aa8.38□□□□□ -1.07
TTC28-206ENST00000480563 OR2C3Q8N628 320 aa8.38□□□□□ -1.07
TTC28-206ENST00000480563 STPG3Q8N7X2 389 aa8.38□□□□□ -1.07
TTC28-206ENST00000480563 OR1L6Q8NGR2 347 aa8.38□□□□□ -1.07
TTC28-206ENST00000480563 CCDC90BQ9GZT6 254 aa8.38□□□□□ -1.07
TTC28-206ENST00000480563 LPAR5Q9H1C0 372 aa8.38□□□□□ -1.07
TTC28-206ENST00000480563 ZNF430Q9H8G1 570 aaPredicted RBP8.38□□□□□ -1.07
TTC28-206ENST00000480563 C12orf4Q9NQ89 552 aa8.38□□□□□ -1.07
TTC28-206ENST00000480563 KIR2DL5BA0A0G2JN68 375 aa8.37□□□□□ -1.07
TTC28-206ENST00000480563 KIR2DL5BA0A0G2JPC4 375 aa8.37□□□□□ -1.07
TTC28-206ENST00000480563 HMX3A6NHT5 357 aa8.37□□□□□ -1.07
TTC28-206ENST00000480563 A8MWP6 167 aa8.37□□□□□ -1.07
TTC28-206ENST00000480563 PTGES3LE9PB15 166 aa8.37□□□□□ -1.07
TTC28-206ENST00000480563 CRYZL1O95825 349 aa8.37□□□□□ -1.07
TTC28-206ENST00000480563 CD1AP06126 327 aa8.37□□□□□ -1.07
TTC28-206ENST00000480563 CD3GP09693 182 aa8.37□□□□□ -1.07
TTC28-206ENST00000480563 TPBGQ13641 420 aa8.37□□□□□ -1.07
TTC28-206ENST00000480563 INSL4Q14641 139 aa8.37□□□□□ -1.07
TTC28-206ENST00000480563 C10orf55Q5SWW7 151 aa8.37□□□□□ -1.07
TTC28-206ENST00000480563 OR4A47Q6IF82 309 aa8.37□□□□□ -1.07
TTC28-206ENST00000480563 C19orf35Q6ZS72 473 aa8.37□□□□□ -1.07
TTC28-206ENST00000480563 LRRTM1Q86UE6 522 aa8.37□□□□□ -1.07
TTC28-206ENST00000480563 SLC38A6Q8IZM9 456 aa8.37□□□□□ -1.07
TTC28-206ENST00000480563 KIR2DL5AQ8N109 375 aa8.37□□□□□ -1.07
TTC28-206ENST00000480563 OR4A4PQ8NGN8 299 aa8.37□□□□□ -1.07
TTC28-206ENST00000480563 KIR2DL5BQ8NHK3 375 aa8.37□□□□□ -1.07
TTC28-206ENST00000480563 C5orf30Q96GV9 206 aa8.37□□□□□ -1.07
TTC28-206ENST00000480563 CMSS1Q9BQ75 279 aaKnown RBP8.37□□□□□ -1.07
TTC28-206ENST00000480563 URM1Q9BTM9 101 aaKnown RBP8.37□□□□□ -1.07
TTC28-206ENST00000480563 FKBP14Q9NWM8 211 aa8.37□□□□□ -1.07
TTC28-206ENST00000480563 UBQLN2Q9UHD9 624 aa8.37□□□□□ -1.07
TTC28-206ENST00000480563 HSF4Q9ULV5 492 aa8.37□□□□□ -1.07
TTC28-206ENST00000480563 ZNF257Q9Y2Q1 563 aa8.37□□□□□ -1.07
TTC28-206ENST00000480563 S4R3C0 116 aa8.37□□□□□ -1.07
TTC28-206ENST00000480563 FOXI3A8MTJ6 420 aaPredicted RBP8.36□□□□□ -1.07
TTC28-206ENST00000480563 BET1O15155 118 aa8.36□□□□□ -1.07
TTC28-206ENST00000480563 CREBL2O60519 120 aaPredicted RBP8.36□□□□□ -1.07
TTC28-206ENST00000480563 BPNT1O95861 308 aa8.36□□□□□ -1.07
TTC28-206ENST00000480563 IFNA4P05014 189 aa8.36□□□□□ -1.07
TTC28-206ENST00000480563 TMEM50BP56557 158 aa8.36□□□□□ -1.07
TTC28-206ENST00000480563 GABARAPL2P60520 117 aa8.36□□□□□ -1.07
TTC28-206ENST00000480563 CDK10Q15131 360 aa8.36□□□□□ -1.07
TTC28-206ENST00000480563 ZNF585BQ52M93 769 aa8.36□□□□□ -1.07
TTC28-206ENST00000480563 ACSM3Q53FZ2 586 aa8.36□□□□□ -1.07
TTC28-206ENST00000480563 IGSF11Q5DX21 431 aa8.36□□□□□ -1.07
TTC28-206ENST00000480563 LAIR2Q6ISS4 152 aa8.36□□□□□ -1.07
TTC28-206ENST00000480563 CEACAM19Q7Z692 300 aa8.36□□□□□ -1.07
TTC28-206ENST00000480563 MMD2Q8IY49 270 aa8.36□□□□□ -1.07
TTC28-206ENST00000480563 FAM89BQ8N5H3 189 aa8.36□□□□□ -1.07
TTC28-206ENST00000480563 OSR1Q8TAX0 266 aaPredicted RBP8.36□□□□□ -1.07
TTC28-206ENST00000480563 MARC2Q969Z3 335 aa8.36□□□□□ -1.07
TTC28-206ENST00000480563 ARHGAP5-AS1Q96IT6 56 aa8.36□□□□□ -1.07
TTC28-206ENST00000480563 CCDC140Q96MF4 163 aa8.36□□□□□ -1.07
TTC28-206ENST00000480563 DPPA5A6NC42 116 aa8.35□□□□□ -1.07
TTC28-206ENST00000480563 LINC00473A8K010 186 aa8.35□□□□□ -1.07
TTC28-206ENST00000480563 FABP7O15540 132 aa8.35□□□□□ -1.07
TTC28-206ENST00000480563 DENRO43583 198 aaKnown RBP8.35□□□□□ -1.07
TTC28-206ENST00000480563 SAA1P0DJI8 122 aaPredicted RBP8.35□□□□□ -1.07
TTC28-206ENST00000480563 C8orf88P0DMB2 117 aa8.35□□□□□ -1.07
TTC28-206ENST00000480563 MED14OSP0DP75 135 aa8.35□□□□□ -1.07
TTC28-206ENST00000480563 CTRB1P17538 263 aa8.35□□□□□ -1.07
TTC28-206ENST00000480563 RPL35AP18077 110 aaKnown RBP8.35□□□□□ -1.07
TTC28-206ENST00000480563 CRHBPP24387 322 aa8.35□□□□□ -1.07
TTC28-206ENST00000480563 DUTP33316 252 aaKnown RBP8.35□□□□□ -1.07
TTC28-206ENST00000480563 NANOS2P60321 138 aaKnown RBP8.35□□□□□ -1.07
TTC28-206ENST00000480563 MED22Q15528 200 aa8.35□□□□□ -1.07
TTC28-206ENST00000480563 CTRB2Q6GPI1 263 aa8.35□□□□□ -1.07
TTC28-206ENST00000480563 UNQ9165/PRO28630Q6UXU0 137 aa8.35□□□□□ -1.07
TTC28-206ENST00000480563 PRSS48Q7RTY5 328 aa8.35□□□□□ -1.07
TTC28-206ENST00000480563 NANOGP1Q8N7R0 232 aa8.35□□□□□ -1.07
TTC28-206ENST00000480563 OR10J5Q8NHC4 309 aa8.35□□□□□ -1.07
TTC28-206ENST00000480563 C11orf45Q8TAV5 145 aa8.35□□□□□ -1.07
TTC28-206ENST00000480563 PHYHIPQ92561 330 aa8.35□□□□□ -1.07
TTC28-206ENST00000480563 EEF1AKMT3Q96AZ1 226 aa8.35□□□□□ -1.07
TTC28-206ENST00000480563 ADTRPQ96IZ2 230 aa8.35□□□□□ -1.07
TTC28-206ENST00000480563 FANCD2OSQ96PS1 177 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms