RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 SLC35E3Q7Z769 313 aa1.3□□□□□ -2.2
PTCD3-209ENST00000472044 TMEM161BQ8NDZ6 487 aa1.3□□□□□ -2.2
PTCD3-209ENST00000472044 OR13C8Q8NGS7 320 aa1.3□□□□□ -2.2
PTCD3-209ENST00000472044 ZNF675Q8TD23 568 aa1.3□□□□□ -2.2
PTCD3-209ENST00000472044 C12orf43Q96C57 262 aaKnown RBP1.3□□□□□ -2.2
PTCD3-209ENST00000472044 NMNAT3Q96T66 252 aa1.3□□□□□ -2.2
PTCD3-209ENST00000472044 BABAM2Q9NXR7 383 aa1.3□□□□□ -2.2
PTCD3-209ENST00000472044 TAAR3PQ9P1P4 343 aa1.3□□□□□ -2.2
PTCD3-209ENST00000472044 AMMECR1Q9Y4X0 333 aaPredicted RBP1.3□□□□□ -2.2
PTCD3-209ENST00000472044 MYH11P35749 1972 aa1.3□□□□□ -2.2
PTCD3-209ENST00000472044 IGHV3-64A0A075B6Q5 118 aa1.29□□□□□ -2.2
PTCD3-209ENST00000472044 TMSB15BA0A087X1C1 80 aa1.29□□□□□ -2.2
PTCD3-209ENST00000472044 SIGLEC16A6NMB1 481 aa1.29□□□□□ -2.2
PTCD3-209ENST00000472044 TXNDC9O14530 226 aa1.29□□□□□ -2.2
PTCD3-209ENST00000472044 PFDN6O15212 129 aa1.29□□□□□ -2.2
PTCD3-209ENST00000472044 TYMSP04818 313 aa1.29□□□□□ -2.2
PTCD3-209ENST00000472044 TPM3P06753 285 aa1.29□□□□□ -2.2
PTCD3-209ENST00000472044 OCM2P0CE71 109 aa1.29□□□□□ -2.2
PTCD3-209ENST00000472044 FXYD7P58549 80 aa1.29□□□□□ -2.2
PTCD3-209ENST00000472044 PPP1R1AQ13522 171 aa1.29□□□□□ -2.2
PTCD3-209ENST00000472044 MIAQ16674 131 aa1.29□□□□□ -2.2
PTCD3-209ENST00000472044 ZNF791Q3KP31 576 aaPredicted RBP1.29□□□□□ -2.2
PTCD3-209ENST00000472044 GNPNAT1Q96EK6 184 aaPredicted RBP1.29□□□□□ -2.2
PTCD3-209ENST00000472044 TTTY13Q9BZ97 58 aa1.29□□□□□ -2.2
PTCD3-209ENST00000472044 DRC3Q9H069 523 aa1.29□□□□□ -2.2
PTCD3-209ENST00000472044 MAP1LC3AQ9H492 121 aa1.29□□□□□ -2.2
PTCD3-209ENST00000472044 ZNHIT6Q9NWK9 470 aaKnown RBP1.29□□□□□ -2.2
PTCD3-209ENST00000472044 DKKL1Q9UK85 242 aa1.29□□□□□ -2.2
PTCD3-209ENST00000472044 MAP3K5Q99683 1374 aa1.29□□□□□ -2.2
PTCD3-209ENST00000472044 NUP160Q12769 1436 aa1.29□□□□□ -2.2
PTCD3-209ENST00000472044 ZNF705FA8MVS1 300 aaPredicted RBP1.28□□□□□ -2.2
PTCD3-209ENST00000472044 DISC1C4P0D8 188 aa1.28□□□□□ -2.2
PTCD3-209ENST00000472044 APOEP02649 317 aa1.28□□□□□ -2.2
PTCD3-209ENST00000472044 GPX1P07203 203 aa1.28□□□□□ -2.2
PTCD3-209ENST00000472044 CA5AP35218 305 aa1.28□□□□□ -2.2
PTCD3-209ENST00000472044 MAGEA2P43356 314 aa1.28□□□□□ -2.2
PTCD3-209ENST00000472044 TPM4P67936 248 aa1.28□□□□□ -2.2
PTCD3-209ENST00000472044 LRRC75BQ2VPJ9 315 aa1.28□□□□□ -2.2
PTCD3-209ENST00000472044 SAPCD1Q5SSQ6 148 aa1.28□□□□□ -2.2
PTCD3-209ENST00000472044 LYZL1Q6UWQ5 148 aa1.28□□□□□ -2.2
PTCD3-209ENST00000472044 PIGXQ8TBF5 258 aa1.28□□□□□ -2.2
PTCD3-209ENST00000472044 RAB2BQ8WUD1 216 aa1.28□□□□□ -2.2
PTCD3-209ENST00000472044 OR51I2Q9H344 312 aa1.28□□□□□ -2.2
PTCD3-209ENST00000472044 HRASLSQ9HDD0 168 aa1.28□□□□□ -2.2
PTCD3-209ENST00000472044 NKIRAS1Q9NYS0 192 aa1.28□□□□□ -2.2
PTCD3-209ENST00000472044 C15orf41Q9Y2V0 281 aa1.28□□□□□ -2.2
PTCD3-209ENST00000472044 CCDC88CQ9P219 2028 aa1.28□□□□□ -2.2
PTCD3-209ENST00000472044 RGS12O14924 1447 aa1.27□□□□□ -2.21
PTCD3-209ENST00000472044 A0A1B0GVG6 124 aa1.27□□□□□ -2.21
PTCD3-209ENST00000472044 RFPL4AA6NLU0 287 aa1.27□□□□□ -2.21
PTCD3-209ENST00000472044 RFPL4AL1F8VTS6 287 aa1.27□□□□□ -2.21
PTCD3-209ENST00000472044 CXCR6O00574 342 aa1.27□□□□□ -2.21
PTCD3-209ENST00000472044 COX7A2LO14548 114 aa1.27□□□□□ -2.21
PTCD3-209ENST00000472044 SLC16A4O15374 487 aa1.27□□□□□ -2.21
PTCD3-209ENST00000472044 MYL12AP19105 171 aa1.27□□□□□ -2.21
PTCD3-209ENST00000472044 RPL12P30050 165 aaKnown RBP1.27□□□□□ -2.21
PTCD3-209ENST00000472044 EMP1P54849 157 aa1.27□□□□□ -2.21
PTCD3-209ENST00000472044 AP1S1P61966 158 aa1.27□□□□□ -2.21
PTCD3-209ENST00000472044 GLO1Q04760 184 aa1.27□□□□□ -2.21
PTCD3-209ENST00000472044 FAM201AQ5SY85 155 aa1.27□□□□□ -2.21
PTCD3-209ENST00000472044 C1orf194Q5T5A4 169 aa1.27□□□□□ -2.21
PTCD3-209ENST00000472044 C5orf46Q6UWT4 87 aa1.27□□□□□ -2.21
PTCD3-209ENST00000472044 LRRN1Q6UXK5 716 aa1.27□□□□□ -2.21
PTCD3-209ENST00000472044 RASSF6Q6ZTQ3 369 aa1.27□□□□□ -2.21
PTCD3-209ENST00000472044 SLC51BQ86UW2 128 aa1.27□□□□□ -2.21
PTCD3-209ENST00000472044 PACRGLQ8N7B6 248 aa1.27□□□□□ -2.21
PTCD3-209ENST00000472044 OR2T27Q8NH04 317 aa1.27□□□□□ -2.21
PTCD3-209ENST00000472044 ZNF563Q8TA94 476 aa1.27□□□□□ -2.21
PTCD3-209ENST00000472044 ASB17Q8WXJ9 295 aa1.27□□□□□ -2.21
PTCD3-209ENST00000472044 USE1Q9NZ43 259 aa1.27□□□□□ -2.21
PTCD3-209ENST00000472044 ANAPC10Q9UM13 185 aa1.27□□□□□ -2.21
PTCD3-209ENST00000472044 A0A0J9YW62 118 aa1.26□□□□□ -2.21
PTCD3-209ENST00000472044 H0Y980 276 aa1.26□□□□□ -2.21
PTCD3-209ENST00000472044 M0QZ92 97 aa1.26□□□□□ -2.21
PTCD3-209ENST00000472044 DEXIO95424 95 aa1.26□□□□□ -2.21
PTCD3-209ENST00000472044 REG1AP05451 166 aa1.26□□□□□ -2.21
PTCD3-209ENST00000472044 CCL1P22362 96 aa1.26□□□□□ -2.21
PTCD3-209ENST00000472044 PSMB8P28062 276 aa1.26□□□□□ -2.21
PTCD3-209ENST00000472044 ALDH3A1P30838 453 aa1.26□□□□□ -2.21
PTCD3-209ENST00000472044 SLCO1A2P46721 670 aa1.26□□□□□ -2.21
PTCD3-209ENST00000472044 BLVRAP53004 296 aa1.26□□□□□ -2.21
PTCD3-209ENST00000472044 AKR1C1Q04828 323 aa1.26□□□□□ -2.21
PTCD3-209ENST00000472044 COTL1Q14019 142 aa1.26□□□□□ -2.21
PTCD3-209ENST00000472044 OGFRL1Q5TC84 451 aaPredicted RBP1.26□□□□□ -2.21
PTCD3-209ENST00000472044 COMMD7Q86VX2 200 aa1.26□□□□□ -2.21
PTCD3-209ENST00000472044 UMODL1-AS1Q8N2C9 162 aa1.26□□□□□ -2.21
PTCD3-209ENST00000472044 OR51T1Q8NGJ9 327 aa1.26□□□□□ -2.21
PTCD3-209ENST00000472044 OR1L8Q8NGR8 309 aa1.26□□□□□ -2.21
PTCD3-209ENST00000472044 SGMS2Q8NHU3 365 aa1.26□□□□□ -2.21
PTCD3-209ENST00000472044 TMA16Q96EY4 203 aaKnown RBP1.26□□□□□ -2.21
PTCD3-209ENST00000472044 VCX3BQ9H321 246 aa1.26□□□□□ -2.21
PTCD3-209ENST00000472044 XAGE1AQ9HD64 81 aa1.26□□□□□ -2.21
PTCD3-209ENST00000472044 AK3Q9UIJ7 227 aa1.26□□□□□ -2.21
PTCD3-209ENST00000472044 C3orf18Q9UK00 162 aa1.26□□□□□ -2.21
PTCD3-209ENST00000472044 PRELID1Q9Y255 219 aa1.26□□□□□ -2.21
PTCD3-209ENST00000472044 COQ4Q9Y3A0 265 aa1.26□□□□□ -2.21
PTCD3-209ENST00000472044 RBM7Q9Y580 266 aaKnown RBP1.26□□□□□ -2.21
PTCD3-209ENST00000472044 HEATR5AQ86XA9 2040 aa1.25□□□□□ -2.21
PTCD3-209ENST00000472044 IGHV1-69-2A0A0G2JMI3 117 aa1.25□□□□□ -2.21
PTCD3-209ENST00000472044 OR4C45A6NMZ5 311 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms