RNA–Protein interactions for RNA: ENST00000466694.5

NUP58-208, Transcript of nucleoporin 58, human

TSL 5

Gene NUP58, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP58-208	ENST00000466694	OR52E5	Q8NH55	327 aa		13.95	□□□□□ -0.18
NUP58-208	ENST00000466694	OR4A16	Q8NH70	328 aa		13.95	□□□□□ -0.18
NUP58-208	ENST00000466694	SFT2D1	Q8WV19	159 aa		13.95	□□□□□ -0.18
NUP58-208	ENST00000466694	NEUROG1	Q92886	237 aa		13.95	□□□□□ -0.18
NUP58-208	ENST00000466694	RBMXL1	Q96E39	390 aa	Known RBP	13.95	□□□□□ -0.18
NUP58-208	ENST00000466694	TMEM147	Q9BVK8	224 aa		13.95	□□□□□ -0.18
NUP58-208	ENST00000466694	GAL3ST2	Q9H3Q3	398 aa		13.95	□□□□□ -0.18
NUP58-208	ENST00000466694	TIMM9	Q9Y5J7	89 aa		13.95	□□□□□ -0.18
NUP58-208	ENST00000466694	TNFRSF13B	O14836	293 aa	Predicted RBP	13.94	□□□□□ -0.18
NUP58-208	ENST00000466694	MMP23A	O75900	390 aa		13.94	□□□□□ -0.18
NUP58-208	ENST00000466694	ATF4	P18848	351 aa	Predicted RBP	13.94	□□□□□ -0.18
NUP58-208	ENST00000466694	OR2B8P	P59922	312 aa		13.94	□□□□□ -0.18
NUP58-208	ENST00000466694	SPCS3	P61009	180 aa		13.94	□□□□□ -0.18
NUP58-208	ENST00000466694	PDLIM3	Q53GG5	364 aa	Predicted RBP	13.94	□□□□□ -0.18
NUP58-208	ENST00000466694	SLC25A48	Q6ZT89	311 aa	Known RBP	13.94	□□□□□ -0.18
NUP58-208	ENST00000466694	OR10P1	Q8NGE3	313 aa		13.94	□□□□□ -0.18
NUP58-208	ENST00000466694	CCL17	Q92583	94 aa		13.94	□□□□□ -0.18
NUP58-208	ENST00000466694	NDRG3	Q9UGV2	375 aa		13.94	□□□□□ -0.18
NUP58-208	ENST00000466694	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	13.93	□□□□□ -0.18
NUP58-208	ENST00000466694		B9A039	149 aa		13.93	□□□□□ -0.18
NUP58-208	ENST00000466694	IFNA17	P01571	189 aa		13.93	□□□□□ -0.18
NUP58-208	ENST00000466694	GNB2	P62879	340 aa		13.93	□□□□□ -0.18
NUP58-208	ENST00000466694	RPL31	P62899	125 aa	Known RBP	13.93	□□□□□ -0.18
NUP58-208	ENST00000466694	TMEM88	Q6PEY1	159 aa		13.93	□□□□□ -0.18
NUP58-208	ENST00000466694	SSX9	Q7RTT3	188 aa		13.93	□□□□□ -0.18
NUP58-208	ENST00000466694	CENPV	Q7Z7K6	275 aa	Predicted RBP	13.93	□□□□□ -0.18
NUP58-208	ENST00000466694	RPRM	Q9NS64	109 aa		13.93	□□□□□ -0.18
NUP58-208	ENST00000466694	HCFC1	P51610	2035 aa		13.93	□□□□□ -0.18
NUP58-208	ENST00000466694	FAM90A27P	A6NNH2	459 aa		13.93	□□□□□ -0.18
NUP58-208	ENST00000466694	GNG10	P50151	68 aa		13.93	□□□□□ -0.18
NUP58-208	ENST00000466694	RELB	Q01201	579 aa		13.93	□□□□□ -0.18
NUP58-208	ENST00000466694	CDSN	Q15517	529 aa		13.93	□□□□□ -0.18
NUP58-208	ENST00000466694	SPINK9	Q5DT21	86 aa		13.93	□□□□□ -0.18
NUP58-208	ENST00000466694	RARRES2	Q99969	163 aa		13.93	□□□□□ -0.18
NUP58-208	ENST00000466694	TMEM140	Q9NV12	185 aa		13.93	□□□□□ -0.18
NUP58-208	ENST00000466694	HIVEP3	Q5T1R4	2406 aa		13.92	□□□□□ -0.18
NUP58-208	ENST00000466694	DAO	P14920	347 aa		13.92	□□□□□ -0.18
NUP58-208	ENST00000466694	VWC2	Q2TAL6	325 aa		13.92	□□□□□ -0.18
NUP58-208	ENST00000466694	TMEM41B	Q5BJD5	291 aa		13.92	□□□□□ -0.18
NUP58-208	ENST00000466694	CBLN2	Q8IUK8	224 aa		13.92	□□□□□ -0.18
NUP58-208	ENST00000466694	VKORC1L1	Q8N0U8	176 aa		13.92	□□□□□ -0.18
NUP58-208	ENST00000466694	ZNF383	Q8NA42	475 aa		13.92	□□□□□ -0.18
NUP58-208	ENST00000466694	MBD3L1	Q8WWY6	194 aa		13.92	□□□□□ -0.18
NUP58-208	ENST00000466694	CLCC1	Q96S66	551 aa		13.92	□□□□□ -0.18
NUP58-208	ENST00000466694	C15orf62	A8K5M9	175 aa		13.91	□□□□□ -0.18
NUP58-208	ENST00000466694	NDUFB3	O43676	98 aa		13.91	□□□□□ -0.18
NUP58-208	ENST00000466694	FCN3	O75636	299 aa		13.91	□□□□□ -0.18
NUP58-208	ENST00000466694	ARG1	P05089	322 aa		13.91	□□□□□ -0.18
NUP58-208	ENST00000466694	RPP30	P78346	268 aa	Known RBP	13.91	□□□□□ -0.18
NUP58-208	ENST00000466694	LRRC10	Q5BKY1	277 aa		13.91	□□□□□ -0.18
NUP58-208	ENST00000466694	ZNF506	Q5JVG8	444 aa		13.91	□□□□□ -0.18
NUP58-208	ENST00000466694	HEPN1	Q6WQI6	88 aa		13.91	□□□□□ -0.18
NUP58-208	ENST00000466694	ZNF429	Q86V71	674 aa		13.91	□□□□□ -0.18
NUP58-208	ENST00000466694	LINC01560	Q8TB33	94 aa		13.91	□□□□□ -0.18
NUP58-208	ENST00000466694	ZNF714	Q96N38	554 aa		13.91	□□□□□ -0.18
NUP58-208	ENST00000466694	VSIR	Q9H7M9	311 aa		13.91	□□□□□ -0.18
NUP58-208	ENST00000466694	POU2AF1	Q16633	256 aa		13.91	□□□□□ -0.18
NUP58-208	ENST00000466694	CLDND2	Q8NHS1	167 aa		13.91	□□□□□ -0.18
NUP58-208	ENST00000466694	KAAG1	Q9UBP8	84 aa		13.91	□□□□□ -0.18
NUP58-208	ENST00000466694	GRN	P28799	593 aa	Known RBP	13.9	□□□□□ -0.18
NUP58-208	ENST00000466694	TMEM200B	Q69YZ2	307 aa		13.9	□□□□□ -0.18
NUP58-208	ENST00000466694	LYPD2	Q6UXB3	125 aa		13.9	□□□□□ -0.18
NUP58-208	ENST00000466694	USP24	Q9UPU5	2620 aa		13.9	□□□□□ -0.19
NUP58-208	ENST00000466694	TRAV3	A0A0B4J244	114 aa		13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	IGHV1-69-2	A0A0G2JMI3	117 aa		13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	C15orf61	A6NNL5	157 aa		13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	PLAU	P00749	431 aa		13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	HRAS	P01112	189 aa		13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	HSPB1	P04792	205 aa	Known RBP	13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	OR13C7	P0DN81	318 aa		13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	FGF7	P21781	194 aa		13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	VDAC2	P45880	294 aa	Predicted RBP	13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	ICAM4	Q14773	271 aa		13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	ZNF726P1	Q15940	193 aa		13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	HAGH	Q16775	308 aa		13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	RCC1L	Q96I51	464 aa	Known RBP	13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	RHOV	Q96L33	236 aa		13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	UNKL	Q9H9P5	680 aa	Known RBP	13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	CISD1	Q9NZ45	108 aa	Known RBP	13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	NDUFA2	O43678	99 aa		13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	SRP19	P09132	144 aa	Known RBP	13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	CT45A6	P0DMU7	189 aa		13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	CT45A5	P0DMU8	189 aa		13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	CT45A7	P0DMV0	189 aa		13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	CCL3L1	P16619	93 aa		13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	MDK	P21741	143 aa	Predicted RBP	13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	KHDC3L	Q587J8	217 aa		13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	SOHLH1	Q5JUK2	328 aa		13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	ZNF787	Q6DD87	383 aa		13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	OR4A47	Q6IF82	309 aa		13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	ZNF833P	Q6ZTB9	187 aa		13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	CTSZ	Q9UBR2	303 aa		13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	TCF19	Q9Y242	345 aa		13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	FOXA2	Q9Y261	457 aa	Predicted RBP	13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	YLPM1	P49750	1951 aa	Known RBP	13.89	□□□□□ -0.19
NUP58-208	ENST00000466694	IGSF10	Q6WRI0	2623 aa		13.88	□□□□□ -0.19
NUP58-208	ENST00000466694	DOCK11	Q5JSL3	2073 aa		13.88	□□□□□ -0.19
NUP58-208	ENST00000466694	ANKHD1	Q8IWZ3	2542 aa	Known RBP	13.88	□□□□□ -0.19
NUP58-208	ENST00000466694	ELL	P55199	621 aa	Predicted RBP	13.88	□□□□□ -0.19
NUP58-208	ENST00000466694	RPS16	P62249	146 aa	Known RBP	13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms