RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 FSTL3O95633 263 aa15.29■□□□□ 0.04
CAPN3-209ENST00000466222 TMEM50AO95807 157 aa15.29■□□□□ 0.04
CAPN3-209ENST00000466222 CGB3P0DN86 165 aa15.29■□□□□ 0.04
CAPN3-209ENST00000466222 CGB7P0DN87 165 aa15.29■□□□□ 0.04
CAPN3-209ENST00000466222 MEOX2P50222 304 aa15.29■□□□□ 0.04
CAPN3-209ENST00000466222 PAX9P55771 341 aa15.29■□□□□ 0.04
CAPN3-209ENST00000466222 RPL31P62899 125 aaKnown RBP15.29■□□□□ 0.04
CAPN3-209ENST00000466222 C17orf58Q2M2W7 97 aa15.29■□□□□ 0.04
CAPN3-209ENST00000466222 TMEM200BQ69YZ2 307 aa15.29■□□□□ 0.04
CAPN3-209ENST00000466222 ZFP82Q8N141 532 aa15.29■□□□□ 0.04
CAPN3-209ENST00000466222 GALMQ96C23 342 aa15.29■□□□□ 0.04
CAPN3-209ENST00000466222 GPR146Q96CH1 333 aa15.29■□□□□ 0.04
CAPN3-209ENST00000466222 LURAP1Q96LR2 239 aa15.29■□□□□ 0.04
CAPN3-209ENST00000466222 WSB1Q9Y6I7 421 aa15.29■□□□□ 0.04
CAPN3-209ENST00000466222 FASNP49327 2511 aaKnown RBP15.29■□□□□ 0.04
CAPN3-209ENST00000466222 TRAV1-1A0A0B4J248 108 aa15.29■□□□□ 0.04
CAPN3-209ENST00000466222 TXNL1O43396 289 aa15.29■□□□□ 0.04
CAPN3-209ENST00000466222 IFNA5P01569 189 aa15.29■□□□□ 0.04
CAPN3-209ENST00000466222 HSPB1P04792 205 aaKnown RBP15.29■□□□□ 0.04
CAPN3-209ENST00000466222 S100A6P06703 90 aa15.29■□□□□ 0.04
CAPN3-209ENST00000466222 CCL3L1P16619 93 aa15.29■□□□□ 0.04
CAPN3-209ENST00000466222 RAB5AP20339 215 aa15.29■□□□□ 0.04
CAPN3-209ENST00000466222 IL2RGP31785 369 aa15.29■□□□□ 0.04
CAPN3-209ENST00000466222 CEACAM6P40199 344 aa15.29■□□□□ 0.04
CAPN3-209ENST00000466222 CR1LQ2VPA4 569 aa15.29■□□□□ 0.04
CAPN3-209ENST00000466222 ZNF506Q5JVG8 444 aa15.29■□□□□ 0.04
CAPN3-209ENST00000466222 C5orf52A6NGY3 159 aa15.28■□□□□ 0.04
CAPN3-209ENST00000466222 UBE2CO00762 179 aa15.28■□□□□ 0.04
CAPN3-209ENST00000466222 CST7O76096 145 aa15.28■□□□□ 0.04
CAPN3-209ENST00000466222 OR13C7P0DN81 318 aa15.28■□□□□ 0.04
CAPN3-209ENST00000466222 AKR1C3P42330 323 aa15.28■□□□□ 0.04
CAPN3-209ENST00000466222 LIN7CQ9NUP9 197 aaKnown RBP15.28■□□□□ 0.04
CAPN3-209ENST00000466222 CALYQ9NYX4 217 aa15.28■□□□□ 0.04
CAPN3-209ENST00000466222 OR6C3Q9NZP0 311 aa15.28■□□□□ 0.04
CAPN3-209ENST00000466222 RNF150Q9ULK6 438 aa15.28■□□□□ 0.04
CAPN3-209ENST00000466222 TRGV10A0A0A0MS01 117 aa15.27■□□□□ 0.04
CAPN3-209ENST00000466222 TNFSF12O43508 249 aa15.27■□□□□ 0.04
CAPN3-209ENST00000466222 GZMHP20718 246 aa15.27■□□□□ 0.04
CAPN3-209ENST00000466222 TMEM155Q4W5P6 130 aa15.27■□□□□ 0.04
CAPN3-209ENST00000466222 RNASE11Q8TAA1 199 aaKnown RBP15.27■□□□□ 0.04
CAPN3-209ENST00000466222 LEAP2Q969E1 77 aa15.27■□□□□ 0.04
CAPN3-209ENST00000466222 GPHA2Q96T91 129 aa15.27■□□□□ 0.04
CAPN3-209ENST00000466222 A0A087WWC5 75 aa15.27■□□□□ 0.03
CAPN3-209ENST00000466222 A0A1W2PPH5 198 aa15.27■□□□□ 0.03
CAPN3-209ENST00000466222 KIAA1324LA8MWY0 1029 aaPredicted RBP15.27■□□□□ 0.03
CAPN3-209ENST00000466222 GPR37O15354 613 aa15.27■□□□□ 0.03
CAPN3-209ENST00000466222 SRP19P09132 144 aaKnown RBP15.27■□□□□ 0.03
CAPN3-209ENST00000466222 OR8U8P0C7N1 319 aa15.27■□□□□ 0.03
CAPN3-209ENST00000466222 C1QL4Q86Z23 238 aa15.27■□□□□ 0.03
CAPN3-209ENST00000466222 OR10G4Q8NGN3 311 aa15.27■□□□□ 0.03
CAPN3-209ENST00000466222 TCEAL7Q9BRU2 100 aa15.27■□□□□ 0.03
CAPN3-209ENST00000466222 KBTBD11-OT1A0A1B0GTJ5 212 aa15.26■□□□□ 0.03
CAPN3-209ENST00000466222 RNF212BA8MTL3 300 aa15.26■□□□□ 0.03
CAPN3-209ENST00000466222 SPINT2O43291 252 aa15.26■□□□□ 0.03
CAPN3-209ENST00000466222 KHDC3LQ587J8 217 aa15.26■□□□□ 0.03
CAPN3-209ENST00000466222 WDR25Q64LD2 544 aaPredicted RBP15.26■□□□□ 0.03
CAPN3-209ENST00000466222 TMEM217Q8N7C4 229 aa15.26■□□□□ 0.03
CAPN3-209ENST00000466222 RARRES2Q99969 163 aa15.26■□□□□ 0.03
CAPN3-209ENST00000466222 C20orf24Q9BUV8 137 aa15.26■□□□□ 0.03
CAPN3-209ENST00000466222 METTL1Q9UBP6 276 aaKnown RBP15.26■□□□□ 0.03
CAPN3-209ENST00000466222 CLN8Q9UBY8 286 aa15.26■□□□□ 0.03
CAPN3-209ENST00000466222 MIOXQ9UGB7 285 aa15.26■□□□□ 0.03
CAPN3-209ENST00000466222 HECTD1Q9ULT8 2610 aa15.26■□□□□ 0.03
CAPN3-209ENST00000466222 SCAF4O95104 1147 aaKnown RBP15.25■□□□□ 0.03
CAPN3-209ENST00000466222 SMIM6P0DI80 62 aa15.25■□□□□ 0.03
CAPN3-209ENST00000466222 DLX1P56177 255 aa15.25■□□□□ 0.03
CAPN3-209ENST00000466222 SNRPEP62304 92 aaKnown RBP15.25■□□□□ 0.03
CAPN3-209ENST00000466222 PRAMEF5Q5TYX0 476 aa15.25■□□□□ 0.03
CAPN3-209ENST00000466222 OR8B3Q8NGG8 313 aa15.25■□□□□ 0.03
CAPN3-209ENST00000466222 OR51H1Q8NH63 302 aa15.25■□□□□ 0.03
CAPN3-209ENST00000466222 NEIL1Q96FI4 390 aaPredicted RBP15.25■□□□□ 0.03
CAPN3-209ENST00000466222 OR8B2Q96RD0 313 aa15.25■□□□□ 0.03
CAPN3-209ENST00000466222 PSMG3Q9BT73 122 aaPredicted RBP15.25■□□□□ 0.03
CAPN3-209ENST00000466222 PARD6GQ9BYG4 376 aaPredicted RBP15.25■□□□□ 0.03
CAPN3-209ENST00000466222 PATZ1Q9HBE1 687 aaKnown RBP15.25■□□□□ 0.03
CAPN3-209ENST00000466222 A0A0G2JRQ6 117 aa15.25■□□□□ 0.03
CAPN3-209ENST00000466222 hADV38S2A0JD32 116 aa15.25■□□□□ 0.03
CAPN3-209ENST00000466222 PCP4L1A6NKN8 68 aa15.25■□□□□ 0.03
CAPN3-209ENST00000466222 FAM90A26D6RGX4 464 aa15.25■□□□□ 0.03
CAPN3-209ENST00000466222 SYNGR2O43760 224 aa15.25■□□□□ 0.03
CAPN3-209ENST00000466222 EPHA1P21709 976 aa15.25■□□□□ 0.03
CAPN3-209ENST00000466222 LOXL3P58215 753 aa15.25■□□□□ 0.03
CAPN3-209ENST00000466222 CCL20P78556 96 aa15.25■□□□□ 0.03
CAPN3-209ENST00000466222 PRB3Q04118 309 aaPredicted RBP15.25■□□□□ 0.03
CAPN3-209ENST00000466222 CORO2AQ92828 525 aa15.25■□□□□ 0.03
CAPN3-209ENST00000466222 ABHD14AQ9BUJ0 271 aa15.25■□□□□ 0.03
CAPN3-209ENST00000466222 LINC00312Q9Y6C7 94 aa15.25■□□□□ 0.03
CAPN3-209ENST00000466222 TANC2Q9HCD6 1990 aa15.24■□□□□ 0.03
CAPN3-209ENST00000466222 A0A1B0GV50 99 aa15.24■□□□□ 0.03
CAPN3-209ENST00000466222 OR2C1O95371 312 aa15.24■□□□□ 0.03
CAPN3-209ENST00000466222 IFNA17P01571 189 aa15.24■□□□□ 0.03
CAPN3-209ENST00000466222 PDLIM4P50479 330 aa15.24■□□□□ 0.03
CAPN3-209ENST00000466222 ICAM4Q14773 271 aa15.24■□□□□ 0.03
CAPN3-209ENST00000466222 SLC25A24Q6NUK1 477 aa15.24■□□□□ 0.03
CAPN3-209ENST00000466222 ZBTB34Q8NCN2 500 aa15.24■□□□□ 0.03
CAPN3-209ENST00000466222 SCGB1C1Q8TD33 95 aa15.24■□□□□ 0.03
CAPN3-209ENST00000466222 ISOC2Q96AB3 205 aa15.24■□□□□ 0.03
CAPN3-209ENST00000466222 NCOR1P1Q9H4R4 102 aa15.24■□□□□ 0.03
CAPN3-209ENST00000466222 PUS1Q9Y606 427 aaKnown RBP eCLIP15.24■□□□□ 0.03
CAPN3-209ENST00000466222 IGHV4-30-2A0A087WSY4 118 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms