RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 SEC22AQ96IW7 307 aa8.89□□□□□ -0.99
VCP-204ENST00000466100 HARBI1Q96MB7 349 aa8.89□□□□□ -0.99
VCP-204ENST00000466100 RBM14Q96PK6 669 aaKnown RBP8.89□□□□□ -0.99
VCP-204ENST00000466100 SEC22CQ9BRL7 303 aa8.89□□□□□ -0.99
VCP-204ENST00000466100 PRR13Q9NZ81 148 aa8.89□□□□□ -0.99
VCP-204ENST00000466100 C7orf66A4D0T2 115 aa8.88□□□□□ -0.99
VCP-204ENST00000466100 PRAF2O60831 178 aa8.88□□□□□ -0.99
VCP-204ENST00000466100 OR2F2O95006 317 aa8.88□□□□□ -0.99
VCP-204ENST00000466100 SPDEFO95238 335 aa8.88□□□□□ -0.99
VCP-204ENST00000466100 DUS4LO95620 317 aaKnown RBP8.88□□□□□ -0.99
VCP-204ENST00000466100 AMY1AP04745 511 aa8.88□□□□□ -0.99
VCP-204ENST00000466100 CRYGBP07316 175 aa8.88□□□□□ -0.99
VCP-204ENST00000466100 IL6RP08887 468 aaPredicted RBP8.88□□□□□ -0.99
VCP-204ENST00000466100 RPA2P15927 270 aa8.88□□□□□ -0.99
VCP-204ENST00000466100 VAMP1P23763 118 aa8.88□□□□□ -0.99
VCP-204ENST00000466100 CBX3Q13185 183 aa8.88□□□□□ -0.99
VCP-204ENST00000466100 HES1Q14469 280 aa8.88□□□□□ -0.99
VCP-204ENST00000466100 LY6EQ16553 131 aa8.88□□□□□ -0.99
VCP-204ENST00000466100 MRGPRG-AS1Q2M3A8 158 aa8.88□□□□□ -0.99
VCP-204ENST00000466100 TRIM16LQ309B1 348 aa8.88□□□□□ -0.99
VCP-204ENST00000466100 C4orf46Q504U0 113 aa8.88□□□□□ -0.99
VCP-204ENST00000466100 SELENOHQ8IZQ5 122 aaKnown RBP8.88□□□□□ -0.99
VCP-204ENST00000466100 PUSL1Q8N0Z8 303 aaKnown RBP8.88□□□□□ -0.99
VCP-204ENST00000466100 FAM71E2Q8N5Q1 922 aa8.88□□□□□ -0.99
VCP-204ENST00000466100 Q8N9W7 124 aa8.88□□□□□ -0.99
VCP-204ENST00000466100 ZNF431Q8TF32 576 aaPredicted RBP8.88□□□□□ -0.99
VCP-204ENST00000466100 MITD1Q8WV92 249 aa8.88□□□□□ -0.99
VCP-204ENST00000466100 IL22RA2Q969J5 263 aa8.88□□□□□ -0.99
VCP-204ENST00000466100 SLC25A33Q9BSK2 321 aa8.88□□□□□ -0.99
VCP-204ENST00000466100 CHIAQ9BZP6 476 aa8.88□□□□□ -0.99
VCP-204ENST00000466100 KCNIP3Q9Y2W7 256 aa8.88□□□□□ -0.99
VCP-204ENST00000466100 FBN1P35555 2871 aaKnown RBP8.87□□□□□ -0.99
VCP-204ENST00000466100 A0A0B4J2A0 478 aa8.87□□□□□ -0.99
VCP-204ENST00000466100 A0A0G2JRQ6 117 aa8.87□□□□□ -0.99
VCP-204ENST00000466100 DBX1A6NMT0 343 aa8.87□□□□□ -0.99
VCP-204ENST00000466100 MARCH11A6NNE9 402 aa8.87□□□□□ -0.99
VCP-204ENST00000466100 SHOXO15266 292 aa8.87□□□□□ -0.99
VCP-204ENST00000466100 NBR2O15453 112 aa8.87□□□□□ -0.99
VCP-204ENST00000466100 IGKV1-5P01602 117 aa8.87□□□□□ -0.99
VCP-204ENST00000466100 SERPINE2P07093 398 aa8.87□□□□□ -0.99
VCP-204ENST00000466100 SAA1P0DJI8 122 aaPredicted RBP8.87□□□□□ -0.99
VCP-204ENST00000466100 ANXA3P12429 323 aa8.87□□□□□ -0.99
VCP-204ENST00000466100 NQO2P16083 231 aa8.87□□□□□ -0.99
VCP-204ENST00000466100 LGALS7P47929 136 aa8.87□□□□□ -0.99
VCP-204ENST00000466100 UBE2KP61086 200 aa8.87□□□□□ -0.99
VCP-204ENST00000466100 RPS16P62249 146 aaKnown RBP8.87□□□□□ -0.99
VCP-204ENST00000466100 SRPXP78539 464 aa8.87□□□□□ -0.99
VCP-204ENST00000466100 PSG5Q15238 335 aa8.87□□□□□ -0.99
VCP-204ENST00000466100 TATDN3Q17R31 274 aa8.87□□□□□ -0.99
VCP-204ENST00000466100 C11orf88Q6PI97 169 aa8.87□□□□□ -0.99
VCP-204ENST00000466100 RBMS3Q6XE24 437 aaKnown RBP8.87□□□□□ -0.99
VCP-204ENST00000466100 C16orf82Q7Z2V1 217 aa8.87□□□□□ -0.99
VCP-204ENST00000466100 VKORC1L1Q8N0U8 176 aa8.87□□□□□ -0.99
VCP-204ENST00000466100 CADM3Q8N126 398 aa8.87□□□□□ -0.99
VCP-204ENST00000466100 C5orf56Q8N8D9 126 aa8.87□□□□□ -0.99
VCP-204ENST00000466100 OR8H1Q8NGG4 311 aa8.87□□□□□ -0.99
VCP-204ENST00000466100 ZNF418Q8TF45 676 aaPredicted RBP8.87□□□□□ -0.99
VCP-204ENST00000466100 CASTOR1Q8WTX7 329 aa8.87□□□□□ -0.99
VCP-204ENST00000466100 RBPMSQ93062 196 aaKnown RBP8.87□□□□□ -0.99
VCP-204ENST00000466100 R3HDM4Q96D70 268 aa8.87□□□□□ -0.99
VCP-204ENST00000466100 RHOVQ96L33 236 aa8.87□□□□□ -0.99
VCP-204ENST00000466100 DUX5Q96PT3 197 aa8.87□□□□□ -0.99
VCP-204ENST00000466100 TSNAXQ99598 290 aaKnown RBP8.87□□□□□ -0.99
VCP-204ENST00000466100 TPSG1Q9NRR2 321 aa8.87□□□□□ -0.99
VCP-204ENST00000466100 SHPKQ9UHJ6 478 aa8.87□□□□□ -0.99
VCP-204ENST00000466100 PITPNC1Q9UKF7 332 aa8.87□□□□□ -0.99
VCP-204ENST00000466100 MOB4Q9Y3A3 225 aa8.87□□□□□ -0.99
VCP-204ENST00000466100 BTBD17A6NE02 478 aa8.86□□□□□ -0.99
VCP-204ENST00000466100 SNRPGP15A8MWD9 76 aa8.86□□□□□ -0.99
VCP-204ENST00000466100 RRHO14718 337 aa8.86□□□□□ -0.99
VCP-204ENST00000466100 FGF16O43320 207 aa8.86□□□□□ -0.99
VCP-204ENST00000466100 SLC25A17O43808 307 aa8.86□□□□□ -0.99
VCP-204ENST00000466100 DHFRP00374 187 aa8.86□□□□□ -0.99
VCP-204ENST00000466100 HRASP01112 189 aa8.86□□□□□ -0.99
VCP-204ENST00000466100 RNASE1P07998 156 aaKnown RBP8.86□□□□□ -0.99
VCP-204ENST00000466100 G6PCP35575 357 aa8.86□□□□□ -0.99
VCP-204ENST00000466100 SSBP2P81877 361 aaPredicted RBP8.86□□□□□ -0.99
VCP-204ENST00000466100 MMDQ15546 238 aa8.86□□□□□ -0.99
VCP-204ENST00000466100 C5orf64Q2M2E5 130 aa8.86□□□□□ -0.99
VCP-204ENST00000466100 NMSQ5H8A3 153 aa8.86□□□□□ -0.99
VCP-204ENST00000466100 TMEM268Q5VZI3 342 aa8.86□□□□□ -0.99
VCP-204ENST00000466100 LGI3Q8N145 548 aa8.86□□□□□ -0.99
VCP-204ENST00000466100 SLC35G3Q8N808 338 aa8.86□□□□□ -0.99
VCP-204ENST00000466100 BET1LQ9NYM9 111 aa8.86□□□□□ -0.99
VCP-204ENST00000466100 SIGLEC9Q9Y336 463 aa8.86□□□□□ -0.99
VCP-204ENST00000466100 ALG5Q9Y673 324 aa8.86□□□□□ -0.99
VCP-204ENST00000466100 A0A0A6YYJ9 748 aa8.85□□□□□ -0.99
VCP-204ENST00000466100 DUXBA0A1W2PPF3 345 aa8.85□□□□□ -0.99
VCP-204ENST00000466100 GPR137BO60478 399 aa8.85□□□□□ -0.99
VCP-204ENST00000466100 KBTBD11O94819 623 aa8.85□□□□□ -0.99
VCP-204ENST00000466100 KRASP01116 189 aa8.85□□□□□ -0.99
VCP-204ENST00000466100 UBA52P62987 128 aaKnown RBP8.85□□□□□ -0.99
VCP-204ENST00000466100 VMA21Q3ZAQ7 101 aa8.85□□□□□ -0.99
VCP-204ENST00000466100 OR4A47Q6IF82 309 aa8.85□□□□□ -0.99
VCP-204ENST00000466100 LIN54Q6MZP7 749 aa8.85□□□□□ -0.99
VCP-204ENST00000466100 LYZL2Q7Z4W2 148 aa8.85□□□□□ -0.99
VCP-204ENST00000466100 TEX45Q8NA69 505 aa8.85□□□□□ -0.99
VCP-204ENST00000466100 TMEM167AQ8TBQ9 72 aa8.85□□□□□ -0.99
VCP-204ENST00000466100 LSM10Q969L4 123 aaKnown RBP8.85□□□□□ -0.99
VCP-204ENST00000466100 FBXL15Q9H469 300 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms